Protein–RNA interactions for Protein: A2IDD5

CCDC78, Coiled-coil domain-containing protein 78, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78A2IDD5 Y_RNA.473-201ENST00000384333 102 ntBASIC3.45□□□□□ -1.86
CCDC78A2IDD5 MIR34B-201ENST00000385076 84 ntBASIC3.45□□□□□ -1.86
CCDC78A2IDD5 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
CCDC78A2IDD5 MORN2-203ENST00000409131 544 ntTSL 5 BASIC3.45□□□□□ -1.86
CCDC78A2IDD5 RNU2-23P-201ENST00000410545 195 ntBASIC3.45□□□□□ -1.86
CCDC78A2IDD5 AC098614.2-201ENST00000426040 255 ntBASIC3.45□□□□□ -1.86
CCDC78A2IDD5 CYCSP4-201ENST00000429682 331 ntBASIC3.45□□□□□ -1.86
CCDC78A2IDD5 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC3.45□□□□□ -1.86
CCDC78A2IDD5 AL078601.1-201ENST00000444542 271 ntBASIC3.45□□□□□ -1.86
CCDC78A2IDD5 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC3.45□□□□□ -1.86
CCDC78A2IDD5 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.45□□□□□ -1.86
CCDC78A2IDD5 AC013470.1-201ENST00000453438 462 ntBASIC3.45□□□□□ -1.86
CCDC78A2IDD5 RPL12P25-201ENST00000455592 494 ntBASIC3.45□□□□□ -1.86
CCDC78A2IDD5 AC010401.1-201ENST00000463867 348 ntBASIC3.45□□□□□ -1.86
CCDC78A2IDD5 AC133134.1-201ENST00000466800 359 ntBASIC3.45□□□□□ -1.86
CCDC78A2IDD5 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC3.45□□□□□ -1.86
CCDC78A2IDD5 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC3.45□□□□□ -1.86
CCDC78A2IDD5 RNU6-928P-201ENST00000516876 104 ntBASIC3.45□□□□□ -1.86
CCDC78A2IDD5 AC025755.1-201ENST00000521306 278 ntBASIC3.45□□□□□ -1.86
CCDC78A2IDD5 AP000867.2-201ENST00000532468 320 ntBASIC3.45□□□□□ -1.86
CCDC78A2IDD5 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.45□□□□□ -1.86
CCDC78A2IDD5 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.45□□□□□ -1.86
CCDC78A2IDD5 MIR4273-201ENST00000582824 84 ntBASIC3.45□□□□□ -1.86
CCDC78A2IDD5 VN1R107P-201ENST00000601784 209 ntBASIC3.45□□□□□ -1.86
CCDC78A2IDD5 AC092447.9-201ENST00000603395 144 ntBASIC3.45□□□□□ -1.86
CCDC78A2IDD5 AC016727.2-201ENST00000603988 621 ntBASIC3.45□□□□□ -1.86
CCDC78A2IDD5 AC136601.2-201ENST00000604356 474 ntBASIC3.45□□□□□ -1.86
CCDC78A2IDD5 AL138880.2-201ENST00000616214 239 ntBASIC3.45□□□□□ -1.86
CCDC78A2IDD5 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC3.45□□□□□ -1.86
CCDC78A2IDD5 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC3.45□□□□□ -1.86
CCDC78A2IDD5 MPP6-209ENST00000625307 126 ntTSL 5 BASIC3.45□□□□□ -1.86
CCDC78A2IDD5 AL606534.2-204ENST00000635008 178 ntBASIC3.45□□□□□ -1.86
CCDC78A2IDD5 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
CCDC78A2IDD5 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.45□□□□□ -1.86
CCDC78A2IDD5 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
CCDC78A2IDD5 AC032011.1-201ENST00000611703 1549 ntBASIC3.44□□□□□ -1.86
CCDC78A2IDD5 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.44□□□□□ -1.86
CCDC78A2IDD5 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
CCDC78A2IDD5 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
CCDC78A2IDD5 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.44□□□□□ -1.86
CCDC78A2IDD5 Y_RNA.380-201ENST00000365663 111 ntBASIC3.44□□□□□ -1.86
CCDC78A2IDD5 SNORA9-201ENST00000384215 133 ntBASIC3.44□□□□□ -1.86
CCDC78A2IDD5 RNU6-166P-201ENST00000384371 107 ntBASIC3.44□□□□□ -1.86
CCDC78A2IDD5 SNORD17-201ENST00000390930 237 ntBASIC3.44□□□□□ -1.86
CCDC78A2IDD5 RNA5SP252-201ENST00000391131 119 ntBASIC3.44□□□□□ -1.86
CCDC78A2IDD5 AL138885.1-201ENST00000405921 675 ntBASIC3.44□□□□□ -1.86
CCDC78A2IDD5 AL356968.1-201ENST00000416622 474 ntBASIC3.44□□□□□ -1.86
CCDC78A2IDD5 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC3.44□□□□□ -1.86
CCDC78A2IDD5 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC3.44□□□□□ -1.86
CCDC78A2IDD5 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.44□□□□□ -1.86
CCDC78A2IDD5 SNRPEP9-201ENST00000436794 238 ntBASIC3.44□□□□□ -1.86
CCDC78A2IDD5 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.44□□□□□ -1.86
CCDC78A2IDD5 CECR9-201ENST00000453421 199 ntBASIC3.44□□□□□ -1.86
CCDC78A2IDD5 AL583843.1-201ENST00000456070 346 ntBASIC3.44□□□□□ -1.86
CCDC78A2IDD5 AC093852.1-201ENST00000503587 266 ntBASIC3.44□□□□□ -1.86
CCDC78A2IDD5 AC074250.1-201ENST00000511117 192 ntBASIC3.44□□□□□ -1.86
CCDC78A2IDD5 RNU7-4P-201ENST00000516961 62 ntBASIC3.44□□□□□ -1.86
CCDC78A2IDD5 SNORA31.19-201ENST00000517079 126 ntBASIC3.44□□□□□ -1.86
CCDC78A2IDD5 RNA5SP165-201ENST00000517142 115 ntBASIC3.44□□□□□ -1.86
CCDC78A2IDD5 AC022616.4-201ENST00000522985 181 ntBASIC3.44□□□□□ -1.86
CCDC78A2IDD5 AP000889.1-201ENST00000530968 660 ntBASIC3.44□□□□□ -1.86
CCDC78A2IDD5 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC3.44□□□□□ -1.86
CCDC78A2IDD5 HMGB1P14-201ENST00000557424 591 ntBASIC3.44□□□□□ -1.86
CCDC78A2IDD5 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.44□□□□□ -1.86
CCDC78A2IDD5 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
CCDC78A2IDD5 AC123912.5-201ENST00000605470 343 ntBASIC3.44□□□□□ -1.86
CCDC78A2IDD5 SCARNA4-202ENST00000625402 129 ntBASIC3.44□□□□□ -1.86
CCDC78A2IDD5 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.44□□□□□ -1.86
CCDC78A2IDD5 AC093908.1-201ENST00000623125 8092 ntBASIC3.44□□□□□ -1.86
CCDC78A2IDD5 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.44□□□□□ -1.86
CCDC78A2IDD5 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.44□□□□□ -1.86
CCDC78A2IDD5 RPL9P7-201ENST00000330965 580 ntBASIC3.43□□□□□ -1.86
CCDC78A2IDD5 Y_RNA.176-201ENST00000363815 109 ntBASIC3.43□□□□□ -1.86
CCDC78A2IDD5 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.43□□□□□ -1.86
CCDC78A2IDD5 RNVU1-14-201ENST00000384770 164 ntBASIC3.43□□□□□ -1.86
CCDC78A2IDD5 RNU1-101P-201ENST00000391171 127 ntBASIC3.43□□□□□ -1.86
CCDC78A2IDD5 AL160004.2-201ENST00000432935 350 ntBASIC3.43□□□□□ -1.86
CCDC78A2IDD5 BX679664.1-201ENST00000434429 253 ntBASIC3.43□□□□□ -1.86
CCDC78A2IDD5 AL513043.1-201ENST00000439124 535 ntBASIC3.43□□□□□ -1.86
CCDC78A2IDD5 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC3.43□□□□□ -1.86
CCDC78A2IDD5 AC112492.4-201ENST00000456549 352 ntBASIC3.43□□□□□ -1.86
CCDC78A2IDD5 AC006026.2-201ENST00000457376 180 ntBASIC3.43□□□□□ -1.86
CCDC78A2IDD5 RPL9P9-202ENST00000466501 579 ntBASIC3.43□□□□□ -1.86
CCDC78A2IDD5 AC022447.4-201ENST00000504053 364 ntBASIC3.43□□□□□ -1.86
CCDC78A2IDD5 MRPS35P2-201ENST00000508242 191 ntBASIC3.43□□□□□ -1.86
CCDC78A2IDD5 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.43□□□□□ -1.86
CCDC78A2IDD5 SNORD59.2-201ENST00000516873 68 ntBASIC3.43□□□□□ -1.86
CCDC78A2IDD5 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.43□□□□□ -1.86
CCDC78A2IDD5 HIGD1AP1-201ENST00000550979 275 ntBASIC3.43□□□□□ -1.86
CCDC78A2IDD5 AMZ2P1-203ENST00000565833 850 ntBASIC3.43□□□□□ -1.86
CCDC78A2IDD5 MIR3200-201ENST00000580767 85 ntBASIC3.43□□□□□ -1.86
CCDC78A2IDD5 AL162713.1-201ENST00000604480 262 ntBASIC3.43□□□□□ -1.86
CCDC78A2IDD5 MIR8076-201ENST00000611401 83 ntBASIC3.43□□□□□ -1.86
CCDC78A2IDD5 AC010205.1-201ENST00000616668 449 ntBASIC3.43□□□□□ -1.86
CCDC78A2IDD5 AC007792.1-201ENST00000623023 402 ntBASIC3.43□□□□□ -1.86
CCDC78A2IDD5 AC073308.1-201ENST00000623696 305 ntBASIC3.43□□□□□ -1.86
CCDC78A2IDD5 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
CCDC78A2IDD5 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC3.43□□□□□ -1.86
CCDC78A2IDD5 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.42□□□□□ -1.86
CCDC78A2IDD5 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.42□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 412.2 ms