Protein–RNA interactions for Protein: A0A0J9YWV2

TRBV4-1, T-cell receptor beta variable 4-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV4-1A0A0J9YWV2 AC009296.1-201ENST00000443146 155 ntBASIC2.35□□□□□ -2.03
TRBV4-1A0A0J9YWV2 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2.35□□□□□ -2.03
TRBV4-1A0A0J9YWV2 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC2.35□□□□□ -2.03
TRBV4-1A0A0J9YWV2 AC013470.1-201ENST00000453438 462 ntBASIC2.35□□□□□ -2.03
TRBV4-1A0A0J9YWV2 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC2.35□□□□□ -2.03
TRBV4-1A0A0J9YWV2 MTCYBP18-201ENST00000501056 747 ntBASIC2.35□□□□□ -2.03
TRBV4-1A0A0J9YWV2 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC2.35□□□□□ -2.03
TRBV4-1A0A0J9YWV2 RPL7P20-201ENST00000520308 745 ntBASIC2.35□□□□□ -2.03
TRBV4-1A0A0J9YWV2 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.35□□□□□ -2.03
TRBV4-1A0A0J9YWV2 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.35□□□□□ -2.03
TRBV4-1A0A0J9YWV2 AC138761.3-201ENST00000579993 334 ntBASIC2.35□□□□□ -2.03
TRBV4-1A0A0J9YWV2 MIR4325-201ENST00000583049 90 ntBASIC2.35□□□□□ -2.03
TRBV4-1A0A0J9YWV2 RNU6-6P-201ENST00000606623 107 ntBASIC2.35□□□□□ -2.03
TRBV4-1A0A0J9YWV2 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
TRBV4-1A0A0J9YWV2 AC010329.5-201ENST00000623497 2174 ntBASIC2.34□□□□□ -2.03
TRBV4-1A0A0J9YWV2 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.34□□□□□ -2.03
TRBV4-1A0A0J9YWV2 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.34□□□□□ -2.03
TRBV4-1A0A0J9YWV2 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.34□□□□□ -2.03
TRBV4-1A0A0J9YWV2 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
TRBV4-1A0A0J9YWV2 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.03
TRBV4-1A0A0J9YWV2 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC2.34□□□□□ -2.03
TRBV4-1A0A0J9YWV2 Y_RNA.157-201ENST00000363638 102 ntBASIC2.34□□□□□ -2.03
TRBV4-1A0A0J9YWV2 RNU6-487P-201ENST00000365430 104 ntBASIC2.34□□□□□ -2.03
TRBV4-1A0A0J9YWV2 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.34□□□□□ -2.03
TRBV4-1A0A0J9YWV2 RNA5SP181-201ENST00000410246 98 ntBASIC2.34□□□□□ -2.03
TRBV4-1A0A0J9YWV2 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC2.34□□□□□ -2.03
TRBV4-1A0A0J9YWV2 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC2.34□□□□□ -2.03
TRBV4-1A0A0J9YWV2 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.34□□□□□ -2.03
TRBV4-1A0A0J9YWV2 MICF-203ENST00000432679 129 ntBASIC2.34□□□□□ -2.03
TRBV4-1A0A0J9YWV2 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.34□□□□□ -2.03
TRBV4-1A0A0J9YWV2 RNU7-138P-201ENST00000459479 64 ntBASIC2.34□□□□□ -2.03
TRBV4-1A0A0J9YWV2 AP001324.2-201ENST00000461163 319 ntBASIC2.34□□□□□ -2.03
TRBV4-1A0A0J9YWV2 AC083904.1-201ENST00000487828 231 ntBASIC2.34□□□□□ -2.03
TRBV4-1A0A0J9YWV2 AC069439.1-201ENST00000494739 167 ntBASIC2.34□□□□□ -2.03
TRBV4-1A0A0J9YWV2 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.34□□□□□ -2.03
TRBV4-1A0A0J9YWV2 SNORA31.23-201ENST00000517219 133 ntBASIC2.34□□□□□ -2.03
TRBV4-1A0A0J9YWV2 AC109479.2-201ENST00000517842 174 ntBASIC2.34□□□□□ -2.03
TRBV4-1A0A0J9YWV2 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.34□□□□□ -2.03
TRBV4-1A0A0J9YWV2 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
TRBV4-1A0A0J9YWV2 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC2.34□□□□□ -2.03
TRBV4-1A0A0J9YWV2 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.34□□□□□ -2.03
TRBV4-1A0A0J9YWV2 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.34□□□□□ -2.03
TRBV4-1A0A0J9YWV2 MIR5692C1-201ENST00000585309 91 ntBASIC2.34□□□□□ -2.03
TRBV4-1A0A0J9YWV2 AL137843.1-201ENST00000605078 385 ntBASIC2.34□□□□□ -2.03
TRBV4-1A0A0J9YWV2 AL121917.1-203ENST00000605534 577 ntBASIC2.34□□□□□ -2.03
TRBV4-1A0A0J9YWV2 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.34□□□□□ -2.03
TRBV4-1A0A0J9YWV2 MIR3529-201ENST00000637713 78 ntBASIC2.34□□□□□ -2.03
TRBV4-1A0A0J9YWV2 MIR7515-201ENST00000637837 67 ntBASIC2.34□□□□□ -2.03
TRBV4-1A0A0J9YWV2 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.34□□□□□ -2.03
TRBV4-1A0A0J9YWV2 AL109809.4-201ENST00000603520 2185 ntBASIC2.34□□□□□ -2.04
TRBV4-1A0A0J9YWV2 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2.34□□□□□ -2.04
TRBV4-1A0A0J9YWV2 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
TRBV4-1A0A0J9YWV2 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.33□□□□□ -2.04
TRBV4-1A0A0J9YWV2 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.33□□□□□ -2.04
TRBV4-1A0A0J9YWV2 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.33□□□□□ -2.04
TRBV4-1A0A0J9YWV2 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
TRBV4-1A0A0J9YWV2 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.33□□□□□ -2.04
TRBV4-1A0A0J9YWV2 SNORD116-20-201ENST00000384529 92 ntBASIC2.33□□□□□ -2.04
TRBV4-1A0A0J9YWV2 AL162578.1-201ENST00000406202 378 ntBASIC2.33□□□□□ -2.04
TRBV4-1A0A0J9YWV2 RNU2-25P-201ENST00000411041 191 ntBASIC2.33□□□□□ -2.04
TRBV4-1A0A0J9YWV2 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.33□□□□□ -2.04
TRBV4-1A0A0J9YWV2 AL117339.3-201ENST00000418733 162 ntBASIC2.33□□□□□ -2.04
TRBV4-1A0A0J9YWV2 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.33□□□□□ -2.04
TRBV4-1A0A0J9YWV2 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.33□□□□□ -2.04
TRBV4-1A0A0J9YWV2 AL365400.1-201ENST00000431854 640 ntBASIC2.33□□□□□ -2.04
TRBV4-1A0A0J9YWV2 RPS15AP7-201ENST00000439294 405 ntBASIC2.33□□□□□ -2.04
TRBV4-1A0A0J9YWV2 RPS12P2-201ENST00000439728 269 ntBASIC2.33□□□□□ -2.04
TRBV4-1A0A0J9YWV2 NFU1P2-201ENST00000448700 469 ntBASIC2.33□□□□□ -2.04
TRBV4-1A0A0J9YWV2 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.33□□□□□ -2.04
TRBV4-1A0A0J9YWV2 AL441985.1-201ENST00000457727 251 ntBASIC2.33□□□□□ -2.04
TRBV4-1A0A0J9YWV2 RNU7-66P-201ENST00000459469 62 ntBASIC2.33□□□□□ -2.04
TRBV4-1A0A0J9YWV2 AP001025.1-201ENST00000486139 332 ntBASIC2.33□□□□□ -2.04
TRBV4-1A0A0J9YWV2 FAM206BP-201ENST00000510179 541 ntBASIC2.33□□□□□ -2.04
TRBV4-1A0A0J9YWV2 SNORA19.2-201ENST00000516013 114 ntBASIC2.33□□□□□ -2.04
TRBV4-1A0A0J9YWV2 RPPH1-2P-201ENST00000516688 293 ntBASIC2.33□□□□□ -2.04
TRBV4-1A0A0J9YWV2 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.33□□□□□ -2.04
TRBV4-1A0A0J9YWV2 BTF3P12-201ENST00000519620 469 ntBASIC2.33□□□□□ -2.04
TRBV4-1A0A0J9YWV2 AC243972.3-201ENST00000539655 198 ntBASIC2.33□□□□□ -2.04
TRBV4-1A0A0J9YWV2 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC2.33□□□□□ -2.04
TRBV4-1A0A0J9YWV2 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.33□□□□□ -2.04
TRBV4-1A0A0J9YWV2 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.33□□□□□ -2.04
TRBV4-1A0A0J9YWV2 AL121757.2-201ENST00000611223 313 ntBASIC2.33□□□□□ -2.04
TRBV4-1A0A0J9YWV2 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.33□□□□□ -2.04
TRBV4-1A0A0J9YWV2 FAM157A-202ENST00000615155 405 ntBASIC2.33□□□□□ -2.04
TRBV4-1A0A0J9YWV2 AC006504.8-201ENST00000621046 635 ntBASIC2.33□□□□□ -2.04
TRBV4-1A0A0J9YWV2 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC2.33□□□□□ -2.04
TRBV4-1A0A0J9YWV2 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.32□□□□□ -2.04
TRBV4-1A0A0J9YWV2 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.32□□□□□ -2.04
TRBV4-1A0A0J9YWV2 AC138393.1-203ENST00000327086 343 ntBASIC2.32□□□□□ -2.04
TRBV4-1A0A0J9YWV2 RNU6-858P-201ENST00000362436 107 ntBASIC2.32□□□□□ -2.04
TRBV4-1A0A0J9YWV2 Y_RNA.100-201ENST00000363141 102 ntBASIC2.32□□□□□ -2.04
TRBV4-1A0A0J9YWV2 U8.8-201ENST00000365399 135 ntBASIC2.32□□□□□ -2.04
TRBV4-1A0A0J9YWV2 RNU6-622P-201ENST00000384272 103 ntBASIC2.32□□□□□ -2.04
TRBV4-1A0A0J9YWV2 MIR9-1-201ENST00000385198 89 ntBASIC2.32□□□□□ -2.04
TRBV4-1A0A0J9YWV2 AC074117.2-201ENST00000417130 397 ntBASIC2.32□□□□□ -2.04
TRBV4-1A0A0J9YWV2 MTND1P2-201ENST00000430604 821 ntBASIC2.32□□□□□ -2.04
TRBV4-1A0A0J9YWV2 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC2.32□□□□□ -2.04
TRBV4-1A0A0J9YWV2 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC2.32□□□□□ -2.04
TRBV4-1A0A0J9YWV2 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
TRBV4-1A0A0J9YWV2 S100A11P2-201ENST00000467589 312 ntBASIC2.32□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 167.4 ms