Protein–RNA interactions for Protein: A0A0B4J268

TRAV4, T-cell receptor alpha variable 4 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV4A0A0B4J268 AL353752.1-201ENST00000454946 260 ntBASIC0.8□□□□□ -2.28
TRAV4A0A0B4J268 RPL9P9-202ENST00000466501 579 ntBASIC0.8□□□□□ -2.28
TRAV4A0A0B4J268 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC0.8□□□□□ -2.28
TRAV4A0A0B4J268 AC108078.1-201ENST00000508073 725 ntBASIC0.8□□□□□ -2.28
TRAV4A0A0B4J268 RNA5SP404-201ENST00000517118 132 ntBASIC0.8□□□□□ -2.28
TRAV4A0A0B4J268 AC019176.1-201ENST00000518519 225 ntBASIC0.8□□□□□ -2.28
TRAV4A0A0B4J268 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC0.8□□□□□ -2.28
TRAV4A0A0B4J268 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC0.8□□□□□ -2.28
TRAV4A0A0B4J268 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC0.8□□□□□ -2.28
TRAV4A0A0B4J268 DEFB108A-201ENST00000530110 222 ntBASIC0.8□□□□□ -2.28
TRAV4A0A0B4J268 AL157871.3-201ENST00000557231 293 ntBASIC0.8□□□□□ -2.28
TRAV4A0A0B4J268 MIR1273C-201ENST00000578669 77 ntBASIC0.8□□□□□ -2.28
TRAV4A0A0B4J268 MIR4524B-201ENST00000581569 115 ntBASIC0.8□□□□□ -2.28
TRAV4A0A0B4J268 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC0.8□□□□□ -2.28
TRAV4A0A0B4J268 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC0.8□□□□□ -2.28
TRAV4A0A0B4J268 AC007792.1-201ENST00000623023 402 ntBASIC0.8□□□□□ -2.28
TRAV4A0A0B4J268 AC104985.3-201ENST00000623479 597 ntBASIC0.8□□□□□ -2.28
TRAV4A0A0B4J268 AC068205.3-201ENST00000636385 468 ntBASIC0.8□□□□□ -2.28
TRAV4A0A0B4J268 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC0.8□□□□□ -2.28
TRAV4A0A0B4J268 Y_RNA.33-201ENST00000362591 102 ntBASIC0.79□□□□□ -2.28
TRAV4A0A0B4J268 RNU6-942P-201ENST00000363002 107 ntBASIC0.79□□□□□ -2.28
TRAV4A0A0B4J268 SNORD114-6-201ENST00000364393 72 ntBASIC0.79□□□□□ -2.28
TRAV4A0A0B4J268 SNORD14B-201ENST00000364533 90 ntBASIC0.79□□□□□ -2.28
TRAV4A0A0B4J268 Y_RNA.534-201ENST00000384599 112 ntBASIC0.79□□□□□ -2.28
TRAV4A0A0B4J268 AC004965.1-201ENST00000413033 213 ntBASIC0.79□□□□□ -2.28
TRAV4A0A0B4J268 RPL21P111-201ENST00000418453 477 ntBASIC0.79□□□□□ -2.28
TRAV4A0A0B4J268 EBAG9P1-201ENST00000418955 543 ntBASIC0.79□□□□□ -2.28
TRAV4A0A0B4J268 EIF1P1-201ENST00000421436 341 ntBASIC0.79□□□□□ -2.28
TRAV4A0A0B4J268 AC092648.1-201ENST00000425870 423 ntBASIC0.79□□□□□ -2.28
TRAV4A0A0B4J268 RPS6P15-201ENST00000431996 751 ntBASIC0.79□□□□□ -2.28
TRAV4A0A0B4J268 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC0.79□□□□□ -2.28
TRAV4A0A0B4J268 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC0.79□□□□□ -2.28
TRAV4A0A0B4J268 PGBD4P5-201ENST00000445958 426 ntBASIC0.79□□□□□ -2.28
TRAV4A0A0B4J268 RPL39P29-201ENST00000447779 157 ntBASIC0.79□□□□□ -2.28
TRAV4A0A0B4J268 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC0.79□□□□□ -2.28
TRAV4A0A0B4J268 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC0.79□□□□□ -2.28
TRAV4A0A0B4J268 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC0.79□□□□□ -2.28
TRAV4A0A0B4J268 AL136520.1-202ENST00000555494 763 ntBASIC0.79□□□□□ -2.28
TRAV4A0A0B4J268 MTCYBP33-201ENST00000575007 1130 ntBASIC0.79□□□□□ -2.28
TRAV4A0A0B4J268 MIR5094-201ENST00000578766 85 ntBASIC0.79□□□□□ -2.28
TRAV4A0A0B4J268 AC078795.2-201ENST00000602835 1252 ntBASIC0.79□□□□□ -2.28
TRAV4A0A0B4J268 AC022022.2-201ENST00000602989 360 ntBASIC0.79□□□□□ -2.28
TRAV4A0A0B4J268 AP000654.2-201ENST00000605633 586 ntBASIC0.79□□□□□ -2.28
TRAV4A0A0B4J268 MIR8065-201ENST00000620577 100 ntBASIC0.79□□□□□ -2.28
TRAV4A0A0B4J268 AC099654.5-201ENST00000636479 350 ntBASIC0.79□□□□□ -2.28
TRAV4A0A0B4J268 AC099654.8-201ENST00000637757 681 ntBASIC0.79□□□□□ -2.28
TRAV4A0A0B4J268 AL391987.6-201ENST00000305671 199 ntBASIC0.78□□□□□ -2.28
TRAV4A0A0B4J268 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC0.78□□□□□ -2.28
TRAV4A0A0B4J268 RNA5SP99-201ENST00000364020 114 ntBASIC0.78□□□□□ -2.28
TRAV4A0A0B4J268 RNU6-1187P-201ENST00000364771 110 ntBASIC0.78□□□□□ -2.28
TRAV4A0A0B4J268 RNU6-1065P-201ENST00000384513 106 ntBASIC0.78□□□□□ -2.28
TRAV4A0A0B4J268 MRPL35P1-201ENST00000404272 572 ntBASIC0.78□□□□□ -2.28
TRAV4A0A0B4J268 AL357139.1-201ENST00000407792 426 ntBASIC0.78□□□□□ -2.28
TRAV4A0A0B4J268 MIR320C1-201ENST00000408566 88 ntBASIC0.78□□□□□ -2.28
TRAV4A0A0B4J268 OR6C66P-201ENST00000414917 930 ntBASIC0.78□□□□□ -2.28
TRAV4A0A0B4J268 BTF3P4-201ENST00000418852 495 ntBASIC0.78□□□□□ -2.28
TRAV4A0A0B4J268 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC0.78□□□□□ -2.28
TRAV4A0A0B4J268 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
TRAV4A0A0B4J268 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC0.78□□□□□ -2.28
TRAV4A0A0B4J268 RPS15AP10-201ENST00000432472 382 ntBASIC0.78□□□□□ -2.28
TRAV4A0A0B4J268 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC0.78□□□□□ -2.28
TRAV4A0A0B4J268 HMGN2P18-201ENST00000450680 270 ntBASIC0.78□□□□□ -2.28
TRAV4A0A0B4J268 AC108059.3-201ENST00000456388 214 ntBASIC0.78□□□□□ -2.28
TRAV4A0A0B4J268 RNA5SP269-201ENST00000459032 137 ntBASIC0.78□□□□□ -2.28
TRAV4A0A0B4J268 MTND1P3-201ENST00000484956 952 ntBASIC0.78□□□□□ -2.28
TRAV4A0A0B4J268 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC0.78□□□□□ -2.28
TRAV4A0A0B4J268 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC0.78□□□□□ -2.28
TRAV4A0A0B4J268 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC0.78□□□□□ -2.28
TRAV4A0A0B4J268 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC0.78□□□□□ -2.28
TRAV4A0A0B4J268 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC0.78□□□□□ -2.28
TRAV4A0A0B4J268 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC0.78□□□□□ -2.28
TRAV4A0A0B4J268 CYP3A52P-201ENST00000563326 91 ntBASIC0.78□□□□□ -2.28
TRAV4A0A0B4J268 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC0.78□□□□□ -2.28
TRAV4A0A0B4J268 AC104984.5-201ENST00000586878 94 ntBASIC0.78□□□□□ -2.28
TRAV4A0A0B4J268 VN1R80P-201ENST00000597126 338 ntBASIC0.78□□□□□ -2.28
TRAV4A0A0B4J268 NIFKP6-201ENST00000598115 845 ntBASIC0.78□□□□□ -2.28
TRAV4A0A0B4J268 AP000942.3-201ENST00000603702 160 ntBASIC0.78□□□□□ -2.28
TRAV4A0A0B4J268 AC004492.1-201ENST00000607036 742 ntBASIC0.78□□□□□ -2.28
TRAV4A0A0B4J268 AC063943.3-201ENST00000615562 356 ntBASIC0.78□□□□□ -2.28
TRAV4A0A0B4J268 MIR6715A-201ENST00000615929 79 ntBASIC0.78□□□□□ -2.28
TRAV4A0A0B4J268 AC092140.2-201ENST00000618027 521 ntBASIC0.78□□□□□ -2.28
TRAV4A0A0B4J268 AC012676.2-201ENST00000619258 186 ntBASIC0.78□□□□□ -2.28
TRAV4A0A0B4J268 AC120349.3-201ENST00000624377 529 ntBASIC0.78□□□□□ -2.28
TRAV4A0A0B4J268 AP003485.1-201ENST00000625093 753 ntBASIC0.78□□□□□ -2.28
TRAV4A0A0B4J268 PLD1-217ENST00000627725 174 ntTSL 5 BASIC0.78□□□□□ -2.28
TRAV4A0A0B4J268 MTND5P42-201ENST00000637720 498 ntBASIC0.78□□□□□ -2.28
TRAV4A0A0B4J268 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC0.77□□□□□ -2.29
TRAV4A0A0B4J268 Y_RNA.140-201ENST00000363474 103 ntBASIC0.77□□□□□ -2.29
TRAV4A0A0B4J268 RNU6-777P-201ENST00000364265 104 ntBASIC0.77□□□□□ -2.29
TRAV4A0A0B4J268 RNU6-395P-201ENST00000365662 106 ntBASIC0.77□□□□□ -2.29
TRAV4A0A0B4J268 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC0.77□□□□□ -2.29
TRAV4A0A0B4J268 SNORA29-201ENST00000384183 140 ntBASIC0.77□□□□□ -2.29
TRAV4A0A0B4J268 MIR1284-201ENST00000408337 120 ntBASIC0.77□□□□□ -2.29
TRAV4A0A0B4J268 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC0.77□□□□□ -2.29
TRAV4A0A0B4J268 AL365338.1-201ENST00000422282 858 ntBASIC0.77□□□□□ -2.29
TRAV4A0A0B4J268 AL590556.1-201ENST00000423231 483 ntBASIC0.77□□□□□ -2.29
TRAV4A0A0B4J268 AL669831.1-202ENST00000428504 417 ntBASIC0.77□□□□□ -2.29
TRAV4A0A0B4J268 C8orf59P1-201ENST00000429930 303 ntBASIC0.77□□□□□ -2.29
TRAV4A0A0B4J268 AL591212.2-201ENST00000433923 257 ntBASIC0.77□□□□□ -2.29
TRAV4A0A0B4J268 HSPE1P9-201ENST00000440046 311 ntBASIC0.77□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms