Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.24□□□□□ -1.89
CCDC187A0A096LP49 U6.99-201ENST00000637524 83 ntBASIC3.24□□□□□ -1.89
CCDC187A0A096LP49 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.24□□□□□ -1.89
CCDC187A0A096LP49 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
CCDC187A0A096LP49 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.24□□□□□ -1.89
CCDC187A0A096LP49 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.24□□□□□ -1.89
CCDC187A0A096LP49 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.23□□□□□ -1.89
CCDC187A0A096LP49 AC093010.3-201ENST00000570269 15214 ntBASIC3.23□□□□□ -1.89
CCDC187A0A096LP49 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
CCDC187A0A096LP49 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.23□□□□□ -1.89
CCDC187A0A096LP49 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CCDC187A0A096LP49 RNU6-778P-201ENST00000363269 103 ntBASIC3.23□□□□□ -1.89
CCDC187A0A096LP49 RNU6-379P-201ENST00000363813 104 ntBASIC3.23□□□□□ -1.89
CCDC187A0A096LP49 RNU6-884P-201ENST00000363889 107 ntBASIC3.23□□□□□ -1.89
CCDC187A0A096LP49 SNORD116-11-201ENST00000383882 92 ntBASIC3.23□□□□□ -1.89
CCDC187A0A096LP49 RNU1-73P-201ENST00000383971 164 ntBASIC3.23□□□□□ -1.89
CCDC187A0A096LP49 Y_RNA.463-201ENST00000384271 102 ntBASIC3.23□□□□□ -1.89
CCDC187A0A096LP49 Y_RNA.496-201ENST00000384444 101 ntBASIC3.23□□□□□ -1.89
CCDC187A0A096LP49 MIR10A-201ENST00000385043 110 ntBASIC3.23□□□□□ -1.89
CCDC187A0A096LP49 MIR34A-201ENST00000385130 110 ntBASIC3.23□□□□□ -1.89
CCDC187A0A096LP49 RNA5SP252-201ENST00000391131 119 ntBASIC3.23□□□□□ -1.89
CCDC187A0A096LP49 AL357075.1-201ENST00000404107 726 ntBASIC3.23□□□□□ -1.89
CCDC187A0A096LP49 MIR548I3-201ENST00000408378 149 ntBASIC3.23□□□□□ -1.89
CCDC187A0A096LP49 MIR548I1-201ENST00000408810 149 ntBASIC3.23□□□□□ -1.89
CCDC187A0A096LP49 AC006989.1-201ENST00000427212 131 ntBASIC3.23□□□□□ -1.89
CCDC187A0A096LP49 TOMM20P4-201ENST00000427861 435 ntBASIC3.23□□□□□ -1.89
CCDC187A0A096LP49 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.23□□□□□ -1.89
CCDC187A0A096LP49 HMGB1P9-201ENST00000429856 646 ntBASIC3.23□□□□□ -1.89
CCDC187A0A096LP49 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC3.23□□□□□ -1.89
CCDC187A0A096LP49 SNAP23P1-201ENST00000433229 246 ntBASIC3.23□□□□□ -1.89
CCDC187A0A096LP49 SUMO1P3-201ENST00000439961 304 ntBASIC3.23□□□□□ -1.89
CCDC187A0A096LP49 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC3.23□□□□□ -1.89
CCDC187A0A096LP49 RPL37P4-201ENST00000448908 268 ntBASIC3.23□□□□□ -1.89
CCDC187A0A096LP49 AC010099.1-201ENST00000455434 375 ntBASIC3.23□□□□□ -1.89
CCDC187A0A096LP49 RPL30P15-201ENST00000457129 321 ntBASIC3.23□□□□□ -1.89
CCDC187A0A096LP49 AC097473.1-201ENST00000508142 408 ntBASIC3.23□□□□□ -1.89
CCDC187A0A096LP49 Y_RNA.668-201ENST00000516233 93 ntBASIC3.23□□□□□ -1.89
CCDC187A0A096LP49 RNU6-1213P-201ENST00000517075 94 ntBASIC3.23□□□□□ -1.89
CCDC187A0A096LP49 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC3.23□□□□□ -1.89
CCDC187A0A096LP49 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC3.23□□□□□ -1.89
CCDC187A0A096LP49 H3F3AP1-201ENST00000559984 334 ntBASIC3.23□□□□□ -1.89
CCDC187A0A096LP49 MIR4782-201ENST00000577987 79 ntBASIC3.23□□□□□ -1.89
CCDC187A0A096LP49 AC138761.3-201ENST00000579993 334 ntBASIC3.23□□□□□ -1.89
CCDC187A0A096LP49 MIR5690-201ENST00000583739 73 ntBASIC3.23□□□□□ -1.89
CCDC187A0A096LP49 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.23□□□□□ -1.89
CCDC187A0A096LP49 AC073657.2-201ENST00000605661 303 ntBASIC3.23□□□□□ -1.89
CCDC187A0A096LP49 RNU6-85P-201ENST00000605989 107 ntBASIC3.23□□□□□ -1.89
CCDC187A0A096LP49 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.23□□□□□ -1.89
CCDC187A0A096LP49 RMST_8.1-201ENST00000610287 165 ntBASIC3.23□□□□□ -1.89
CCDC187A0A096LP49 AC107871.2-201ENST00000612894 502 ntBASIC3.23□□□□□ -1.89
CCDC187A0A096LP49 AL162373.1-201ENST00000620433 407 ntBASIC3.23□□□□□ -1.89
CCDC187A0A096LP49 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC3.23□□□□□ -1.89
CCDC187A0A096LP49 AC073308.1-201ENST00000623696 305 ntBASIC3.23□□□□□ -1.89
CCDC187A0A096LP49 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
CCDC187A0A096LP49 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.23□□□□□ -1.89
CCDC187A0A096LP49 SRP72P2-201ENST00000344851 1979 ntBASIC3.23□□□□□ -1.89
CCDC187A0A096LP49 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.23□□□□□ -1.89
CCDC187A0A096LP49 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CCDC187A0A096LP49 ZNF519P1-201ENST00000449011 1626 ntBASIC3.22□□□□□ -1.89
CCDC187A0A096LP49 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.22□□□□□ -1.89
CCDC187A0A096LP49 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
CCDC187A0A096LP49 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CCDC187A0A096LP49 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
CCDC187A0A096LP49 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
CCDC187A0A096LP49 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.22□□□□□ -1.89
CCDC187A0A096LP49 AC138393.1-203ENST00000327086 343 ntBASIC3.22□□□□□ -1.89
CCDC187A0A096LP49 RNU6-562P-201ENST00000362731 107 ntBASIC3.22□□□□□ -1.89
CCDC187A0A096LP49 RNU6-214P-201ENST00000384130 107 ntBASIC3.22□□□□□ -1.89
CCDC187A0A096LP49 Y_RNA.476-201ENST00000384347 108 ntBASIC3.22□□□□□ -1.89
CCDC187A0A096LP49 RNY1P14-201ENST00000384426 108 ntBASIC3.22□□□□□ -1.89
CCDC187A0A096LP49 Y_RNA.500-201ENST00000384466 111 ntBASIC3.22□□□□□ -1.89
CCDC187A0A096LP49 Y_RNA.527-201ENST00000384573 102 ntBASIC3.22□□□□□ -1.89
CCDC187A0A096LP49 Y_RNA.574-201ENST00000384766 95 ntBASIC3.22□□□□□ -1.89
CCDC187A0A096LP49 HNRNPDLP1-201ENST00000412834 550 ntBASIC3.22□□□□□ -1.89
CCDC187A0A096LP49 NDUFS5P4-201ENST00000412983 318 ntBASIC3.22□□□□□ -1.89
CCDC187A0A096LP49 AC017079.2-201ENST00000416102 485 ntBASIC3.22□□□□□ -1.89
CCDC187A0A096LP49 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC3.22□□□□□ -1.89
CCDC187A0A096LP49 AC099548.1-201ENST00000421443 426 ntBASIC3.22□□□□□ -1.89
CCDC187A0A096LP49 MTCYBP10-201ENST00000424905 650 ntBASIC3.22□□□□□ -1.89
CCDC187A0A096LP49 AC236972.1-201ENST00000433225 199 ntBASIC3.22□□□□□ -1.89
CCDC187A0A096LP49 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC3.22□□□□□ -1.89
CCDC187A0A096LP49 S100A11P2-201ENST00000467589 312 ntBASIC3.22□□□□□ -1.89
CCDC187A0A096LP49 AC026801.1-201ENST00000497178 464 ntBASIC3.22□□□□□ -1.89
CCDC187A0A096LP49 RPS27P27-201ENST00000498779 255 ntBASIC3.22□□□□□ -1.89
CCDC187A0A096LP49 AC008526.1-201ENST00000509149 338 ntBASIC3.22□□□□□ -1.89
CCDC187A0A096LP49 RPL39P5-202ENST00000512505 151 ntBASIC3.22□□□□□ -1.89
CCDC187A0A096LP49 RNA5SP341-201ENST00000516261 117 ntBASIC3.22□□□□□ -1.89
CCDC187A0A096LP49 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.22□□□□□ -1.89
CCDC187A0A096LP49 AC025423.5-201ENST00000550230 219 ntBASIC3.22□□□□□ -1.89
CCDC187A0A096LP49 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.22□□□□□ -1.89
CCDC187A0A096LP49 LARP7P3-201ENST00000579888 337 ntBASIC3.22□□□□□ -1.89
CCDC187A0A096LP49 OR1M4P-201ENST00000589199 287 ntBASIC3.22□□□□□ -1.89
CCDC187A0A096LP49 AL451007.1-201ENST00000595491 289 ntBASIC3.22□□□□□ -1.89
CCDC187A0A096LP49 PRR13P7-201ENST00000605538 430 ntBASIC3.22□□□□□ -1.89
CCDC187A0A096LP49 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.22□□□□□ -1.89
CCDC187A0A096LP49 RNVU1-4-201ENST00000612985 164 ntBASIC3.22□□□□□ -1.89
CCDC187A0A096LP49 ATP5A1P2-202ENST00000616464 443 ntBASIC3.22□□□□□ -1.89
CCDC187A0A096LP49 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
CCDC187A0A096LP49 AL669831.3-213ENST00000636676 183 ntBASIC3.22□□□□□ -1.89
CCDC187A0A096LP49 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 150.5 ms