Protein–RNA interactions for Protein: Q9Y6N9

USH1C, Harmonin, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1CQ9Y6N9 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC1.39□□□□□ -2.19
USH1CQ9Y6N9 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC1.39□□□□□ -2.19
USH1CQ9Y6N9 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC1.39□□□□□ -2.19
USH1CQ9Y6N9 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC1.39□□□□□ -2.19
USH1CQ9Y6N9 AC012065.4-201ENST00000602445 679 ntBASIC1.39□□□□□ -2.19
USH1CQ9Y6N9 AL592221.1-201ENST00000605266 382 ntBASIC1.39□□□□□ -2.19
USH1CQ9Y6N9 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
USH1CQ9Y6N9 HAUS6P2-201ENST00000433254 2404 ntBASIC1.38□□□□□ -2.19
USH1CQ9Y6N9 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
USH1CQ9Y6N9 RNU1-58P-201ENST00000362413 163 ntBASIC1.38□□□□□ -2.19
USH1CQ9Y6N9 RNU6-1164P-201ENST00000364428 107 ntBASIC1.38□□□□□ -2.19
USH1CQ9Y6N9 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
USH1CQ9Y6N9 RNU6-946P-201ENST00000383878 107 ntBASIC1.38□□□□□ -2.19
USH1CQ9Y6N9 SLC44A3-AS1-205ENST00000424505 612 ntBASIC1.38□□□□□ -2.19
USH1CQ9Y6N9 AL513185.2-201ENST00000425543 193 ntBASIC1.38□□□□□ -2.19
USH1CQ9Y6N9 AC108667.1-201ENST00000428618 249 ntBASIC1.38□□□□□ -2.19
USH1CQ9Y6N9 AC015922.2-201ENST00000435593 184 ntBASIC1.38□□□□□ -2.19
USH1CQ9Y6N9 AL121594.1-201ENST00000475906 575 ntBASIC1.38□□□□□ -2.19
USH1CQ9Y6N9 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC1.38□□□□□ -2.19
USH1CQ9Y6N9 AC108729.3-201ENST00000513484 108 ntBASIC1.38□□□□□ -2.19
USH1CQ9Y6N9 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC1.38□□□□□ -2.19
USH1CQ9Y6N9 RN7SKP179-201ENST00000516126 217 ntBASIC1.38□□□□□ -2.19
USH1CQ9Y6N9 Y_RNA.689-201ENST00000516589 107 ntBASIC1.38□□□□□ -2.19
USH1CQ9Y6N9 AC022616.8-201ENST00000533569 253 ntBASIC1.38□□□□□ -2.19
USH1CQ9Y6N9 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC1.38□□□□□ -2.19
USH1CQ9Y6N9 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC1.38□□□□□ -2.19
USH1CQ9Y6N9 SNORD53B-201ENST00000577887 78 ntBASIC1.38□□□□□ -2.19
USH1CQ9Y6N9 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.38□□□□□ -2.19
USH1CQ9Y6N9 CYP2C61P-201ENST00000604072 290 ntBASIC1.38□□□□□ -2.19
USH1CQ9Y6N9 AL158042.1-201ENST00000605338 460 ntBASIC1.38□□□□□ -2.19
USH1CQ9Y6N9 AL022345.1-201ENST00000607292 135 ntBASIC1.38□□□□□ -2.19
USH1CQ9Y6N9 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC1.38□□□□□ -2.19
USH1CQ9Y6N9 AC091812.1-201ENST00000432235 1948 ntBASIC1.38□□□□□ -2.19
USH1CQ9Y6N9 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
USH1CQ9Y6N9 ZNF736P9Y-201ENST00000439586 1345 ntBASIC1.38□□□□□ -2.19
USH1CQ9Y6N9 FARSBP1-201ENST00000435808 1778 ntBASIC1.37□□□□□ -2.19
USH1CQ9Y6N9 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
USH1CQ9Y6N9 U8.1-201ENST00000362843 134 ntBASIC1.37□□□□□ -2.19
USH1CQ9Y6N9 RNU6-942P-201ENST00000363002 107 ntBASIC1.37□□□□□ -2.19
USH1CQ9Y6N9 RNU6-511P-201ENST00000363496 107 ntBASIC1.37□□□□□ -2.19
USH1CQ9Y6N9 RNU6-944P-201ENST00000364023 107 ntBASIC1.37□□□□□ -2.19
USH1CQ9Y6N9 RNU6-743P-201ENST00000364151 106 ntBASIC1.37□□□□□ -2.19
USH1CQ9Y6N9 RNU5E-6P-201ENST00000365574 115 ntBASIC1.37□□□□□ -2.19
USH1CQ9Y6N9 BTF3L4P2-201ENST00000392798 346 ntBASIC1.37□□□□□ -2.19
USH1CQ9Y6N9 Y_RNA.623-201ENST00000411128 95 ntBASIC1.37□□□□□ -2.19
USH1CQ9Y6N9 AC009310.1-201ENST00000414414 451 ntBASIC1.37□□□□□ -2.19
USH1CQ9Y6N9 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC1.37□□□□□ -2.19
USH1CQ9Y6N9 TRIM60P10Y-201ENST00000425589 751 ntBASIC1.37□□□□□ -2.19
USH1CQ9Y6N9 AC117532.1-201ENST00000514638 323 ntBASIC1.37□□□□□ -2.19
USH1CQ9Y6N9 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC1.37□□□□□ -2.19
USH1CQ9Y6N9 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC1.37□□□□□ -2.19
USH1CQ9Y6N9 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.37□□□□□ -2.19
USH1CQ9Y6N9 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.37□□□□□ -2.19
USH1CQ9Y6N9 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC1.37□□□□□ -2.19
USH1CQ9Y6N9 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC1.37□□□□□ -2.19
USH1CQ9Y6N9 AC174048.1-201ENST00000603389 144 ntBASIC1.37□□□□□ -2.19
USH1CQ9Y6N9 AC069431.2-201ENST00000604149 1099 ntBASIC1.37□□□□□ -2.19
USH1CQ9Y6N9 BNIP3P31-201ENST00000604515 566 ntBASIC1.37□□□□□ -2.19
USH1CQ9Y6N9 AC108747.1-201ENST00000609508 535 ntBASIC1.37□□□□□ -2.19
USH1CQ9Y6N9 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.37□□□□□ -2.19
USH1CQ9Y6N9 AL355816.2-201ENST00000610049 647 ntBASIC1.37□□□□□ -2.19
USH1CQ9Y6N9 uc_338.12-201ENST00000616344 181 ntBASIC1.37□□□□□ -2.19
USH1CQ9Y6N9 AC006338.1-201ENST00000618453 749 ntBASIC1.37□□□□□ -2.19
USH1CQ9Y6N9 AC024940.5-201ENST00000622889 474 ntBASIC1.37□□□□□ -2.19
USH1CQ9Y6N9 AC093648.1-201ENST00000623546 606 ntBASIC1.37□□□□□ -2.19
USH1CQ9Y6N9 AC004808.1-201ENST00000627671 721 ntBASIC1.37□□□□□ -2.19
USH1CQ9Y6N9 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.37□□□□□ -2.19
USH1CQ9Y6N9 MIR378A-201ENST00000362177 66 ntBASIC1.36□□□□□ -2.19
USH1CQ9Y6N9 Y_RNA.46-201ENST00000362695 102 ntBASIC1.36□□□□□ -2.19
USH1CQ9Y6N9 RNU6-1210P-201ENST00000363775 107 ntBASIC1.36□□□□□ -2.19
USH1CQ9Y6N9 RNU4-68P-201ENST00000364314 141 ntBASIC1.36□□□□□ -2.19
USH1CQ9Y6N9 RNU6-487P-201ENST00000365430 104 ntBASIC1.36□□□□□ -2.19
USH1CQ9Y6N9 MIR30A-201ENST00000385092 71 ntBASIC1.36□□□□□ -2.19
USH1CQ9Y6N9 Y_RNA.595-201ENST00000410403 105 ntBASIC1.36□□□□□ -2.19
USH1CQ9Y6N9 RNU2-41P-201ENST00000410991 178 ntBASIC1.36□□□□□ -2.19
USH1CQ9Y6N9 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC1.36□□□□□ -2.19
USH1CQ9Y6N9 SRIP3-201ENST00000413200 219 ntBASIC1.36□□□□□ -2.19
USH1CQ9Y6N9 SNRPGP13-201ENST00000442212 177 ntBASIC1.36□□□□□ -2.19
USH1CQ9Y6N9 AC118469.1-201ENST00000442943 488 ntBASIC1.36□□□□□ -2.19
USH1CQ9Y6N9 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC1.36□□□□□ -2.19
USH1CQ9Y6N9 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
USH1CQ9Y6N9 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.36□□□□□ -2.19
USH1CQ9Y6N9 RN7SKP210-201ENST00000459176 261 ntBASIC1.36□□□□□ -2.19
USH1CQ9Y6N9 AC119751.4-201ENST00000507498 357 ntBASIC1.36□□□□□ -2.19
USH1CQ9Y6N9 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC1.36□□□□□ -2.19
USH1CQ9Y6N9 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC1.36□□□□□ -2.19
USH1CQ9Y6N9 CR383656.8-201ENST00000549046 145 ntBASIC1.36□□□□□ -2.19
USH1CQ9Y6N9 AC068338.1-201ENST00000565567 176 ntBASIC1.36□□□□□ -2.19
USH1CQ9Y6N9 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC1.36□□□□□ -2.19
USH1CQ9Y6N9 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC1.36□□□□□ -2.19
USH1CQ9Y6N9 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC1.36□□□□□ -2.19
USH1CQ9Y6N9 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.36□□□□□ -2.19
USH1CQ9Y6N9 MIR424-201ENST00000362227 98 ntBASIC1.35□□□□□ -2.19
USH1CQ9Y6N9 RNU6-212P-201ENST00000362642 104 ntBASIC1.35□□□□□ -2.19
USH1CQ9Y6N9 Y_RNA.40-201ENST00000362645 93 ntBASIC1.35□□□□□ -2.19
USH1CQ9Y6N9 SNORD3E-201ENST00000362899 217 ntBASIC1.35□□□□□ -2.19
USH1CQ9Y6N9 RNU4-13P-201ENST00000364019 141 ntBASIC1.35□□□□□ -2.19
USH1CQ9Y6N9 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC1.35□□□□□ -2.19
USH1CQ9Y6N9 RNU6-622P-201ENST00000384272 103 ntBASIC1.35□□□□□ -2.19
USH1CQ9Y6N9 RNU6-72P-201ENST00000384285 79 ntBASIC1.35□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 153.2 ms