Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 AC099778.2-201ENST00000610904 211 ntBASIC3.5□□□□□ -1.85
PCDHGA3Q9Y5H0 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC3.5□□□□□ -1.85
PCDHGA3Q9Y5H0 AL669831.3-213ENST00000636676 183 ntBASIC3.5□□□□□ -1.85
PCDHGA3Q9Y5H0 AP000553.6-201ENST00000641242 118 ntBASIC3.5□□□□□ -1.85
PCDHGA3Q9Y5H0 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.5□□□□□ -1.85
PCDHGA3Q9Y5H0 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC3.5□□□□□ -1.85
PCDHGA3Q9Y5H0 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
PCDHGA3Q9Y5H0 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
PCDHGA3Q9Y5H0 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
PCDHGA3Q9Y5H0 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.5□□□□□ -1.85
PCDHGA3Q9Y5H0 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.49□□□□□ -1.85
PCDHGA3Q9Y5H0 AL079305.1-201ENST00000623159 3008 ntBASIC3.49□□□□□ -1.85
PCDHGA3Q9Y5H0 AC103988.1-201ENST00000566382 2177 ntBASIC3.49□□□□□ -1.85
PCDHGA3Q9Y5H0 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
PCDHGA3Q9Y5H0 PWAR6-201ENST00000552334 4618 ntBASIC3.49□□□□□ -1.85
PCDHGA3Q9Y5H0 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
PCDHGA3Q9Y5H0 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
PCDHGA3Q9Y5H0 SNORD9-201ENST00000362566 104 ntBASIC3.49□□□□□ -1.85
PCDHGA3Q9Y5H0 RNA5SP50-201ENST00000363731 107 ntBASIC3.49□□□□□ -1.85
PCDHGA3Q9Y5H0 RNU6-283P-201ENST00000364788 107 ntBASIC3.49□□□□□ -1.85
PCDHGA3Q9Y5H0 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC3.49□□□□□ -1.85
PCDHGA3Q9Y5H0 SNORD116-29-201ENST00000384516 83 ntBASIC3.49□□□□□ -1.85
PCDHGA3Q9Y5H0 RNU6-306P-201ENST00000384617 107 ntBASIC3.49□□□□□ -1.85
PCDHGA3Q9Y5H0 BTF3L4P2-201ENST00000392798 346 ntBASIC3.49□□□□□ -1.85
PCDHGA3Q9Y5H0 MIR1302-11-201ENST00000408051 138 ntBASIC3.49□□□□□ -1.85
PCDHGA3Q9Y5H0 MIR1302-9-201ENST00000408365 138 ntBASIC3.49□□□□□ -1.85
PCDHGA3Q9Y5H0 MIR1302-10-201ENST00000408734 138 ntBASIC3.49□□□□□ -1.85
PCDHGA3Q9Y5H0 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC3.49□□□□□ -1.85
PCDHGA3Q9Y5H0 USMG5P1-201ENST00000425964 177 ntBASIC3.49□□□□□ -1.85
PCDHGA3Q9Y5H0 USP9YP30-201ENST00000430729 455 ntBASIC3.49□□□□□ -1.85
PCDHGA3Q9Y5H0 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC3.49□□□□□ -1.85
PCDHGA3Q9Y5H0 RPL30P15-201ENST00000457129 321 ntBASIC3.49□□□□□ -1.85
PCDHGA3Q9Y5H0 RN7SL601P-201ENST00000471221 293 ntBASIC3.49□□□□□ -1.85
PCDHGA3Q9Y5H0 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.49□□□□□ -1.85
PCDHGA3Q9Y5H0 AC097462.2-201ENST00000504623 481 ntBASIC3.49□□□□□ -1.85
PCDHGA3Q9Y5H0 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC3.49□□□□□ -1.85
PCDHGA3Q9Y5H0 Y_RNA.701-201ENST00000516812 110 ntBASIC3.49□□□□□ -1.85
PCDHGA3Q9Y5H0 RN7SKP209-201ENST00000516888 304 ntBASIC3.49□□□□□ -1.85
PCDHGA3Q9Y5H0 MIR4425-201ENST00000580572 84 ntBASIC3.49□□□□□ -1.85
PCDHGA3Q9Y5H0 AC078795.3-201ENST00000602913 472 ntBASIC3.49□□□□□ -1.85
PCDHGA3Q9Y5H0 AC091152.3-201ENST00000604227 325 ntBASIC3.49□□□□□ -1.85
PCDHGA3Q9Y5H0 MIR1302-2-201ENST00000607096 138 ntBASIC3.49□□□□□ -1.85
PCDHGA3Q9Y5H0 AC009229.3-201ENST00000608056 282 ntBASIC3.49□□□□□ -1.85
PCDHGA3Q9Y5H0 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
PCDHGA3Q9Y5H0 AC090971.5-201ENST00000621102 293 ntBASIC3.49□□□□□ -1.85
PCDHGA3Q9Y5H0 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.49□□□□□ -1.85
PCDHGA3Q9Y5H0 SNORA50A-202ENST00000629536 136 ntBASIC3.49□□□□□ -1.85
PCDHGA3Q9Y5H0 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.49□□□□□ -1.85
PCDHGA3Q9Y5H0 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.49□□□□□ -1.85
PCDHGA3Q9Y5H0 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.49□□□□□ -1.85
PCDHGA3Q9Y5H0 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.49□□□□□ -1.85
PCDHGA3Q9Y5H0 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
PCDHGA3Q9Y5H0 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
PCDHGA3Q9Y5H0 Y_RNA.2-201ENST00000362330 96 ntBASIC3.48□□□□□ -1.85
PCDHGA3Q9Y5H0 U8.8-201ENST00000365399 135 ntBASIC3.48□□□□□ -1.85
PCDHGA3Q9Y5H0 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
PCDHGA3Q9Y5H0 MIR521-1-201ENST00000384902 87 ntBASIC3.48□□□□□ -1.85
PCDHGA3Q9Y5H0 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
PCDHGA3Q9Y5H0 AL591034.2-201ENST00000402839 359 ntBASIC3.48□□□□□ -1.85
PCDHGA3Q9Y5H0 AP000275.1-201ENST00000411943 390 ntBASIC3.48□□□□□ -1.85
PCDHGA3Q9Y5H0 AF228730.4-201ENST00000421457 183 ntBASIC3.48□□□□□ -1.85
PCDHGA3Q9Y5H0 EIF4EP2-201ENST00000422816 654 ntBASIC3.48□□□□□ -1.85
PCDHGA3Q9Y5H0 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.48□□□□□ -1.85
PCDHGA3Q9Y5H0 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC3.48□□□□□ -1.85
PCDHGA3Q9Y5H0 NDUFB9P3-201ENST00000521269 501 ntBASIC3.48□□□□□ -1.85
PCDHGA3Q9Y5H0 CKS1BP7-201ENST00000522230 235 ntBASIC3.48□□□□□ -1.85
PCDHGA3Q9Y5H0 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.48□□□□□ -1.85
PCDHGA3Q9Y5H0 AC007458.1-201ENST00000542812 373 ntBASIC3.48□□□□□ -1.85
PCDHGA3Q9Y5H0 AC008011.1-201ENST00000545989 227 ntBASIC3.48□□□□□ -1.85
PCDHGA3Q9Y5H0 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.48□□□□□ -1.85
PCDHGA3Q9Y5H0 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.48□□□□□ -1.85
PCDHGA3Q9Y5H0 AC011494.1-201ENST00000596454 237 ntBASIC3.48□□□□□ -1.85
PCDHGA3Q9Y5H0 AC096772.1-201ENST00000609146 564 ntBASIC3.48□□□□□ -1.85
PCDHGA3Q9Y5H0 DLEU2_5.1-201ENST00000615567 84 ntBASIC3.48□□□□□ -1.85
PCDHGA3Q9Y5H0 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC3.48□□□□□ -1.85
PCDHGA3Q9Y5H0 AC032011.1-201ENST00000611703 1549 ntBASIC3.48□□□□□ -1.85
PCDHGA3Q9Y5H0 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.48□□□□□ -1.85
PCDHGA3Q9Y5H0 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
PCDHGA3Q9Y5H0 AC091564.4-201ENST00000533934 2194 ntBASIC3.48□□□□□ -1.85
PCDHGA3Q9Y5H0 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
PCDHGA3Q9Y5H0 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.48□□□□□ -1.85
PCDHGA3Q9Y5H0 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.48□□□□□ -1.85
PCDHGA3Q9Y5H0 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
PCDHGA3Q9Y5H0 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
PCDHGA3Q9Y5H0 GABRG2-229ENST00000641017 3628 ntBASIC3.48□□□□□ -1.85
PCDHGA3Q9Y5H0 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
PCDHGA3Q9Y5H0 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
PCDHGA3Q9Y5H0 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
PCDHGA3Q9Y5H0 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
PCDHGA3Q9Y5H0 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
PCDHGA3Q9Y5H0 RNU1-33P-201ENST00000364249 162 ntBASIC3.47□□□□□ -1.85
PCDHGA3Q9Y5H0 XGY1-201ENST00000381172 446 ntBASIC3.47□□□□□ -1.85
PCDHGA3Q9Y5H0 RNU6-1027P-201ENST00000383998 107 ntBASIC3.47□□□□□ -1.85
PCDHGA3Q9Y5H0 RNU6-43P-201ENST00000384302 107 ntBASIC3.47□□□□□ -1.85
PCDHGA3Q9Y5H0 MIR147B-201ENST00000390185 80 ntBASIC3.47□□□□□ -1.85
PCDHGA3Q9Y5H0 RNU2-49P-201ENST00000410666 184 ntBASIC3.47□□□□□ -1.85
PCDHGA3Q9Y5H0 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC3.47□□□□□ -1.85
PCDHGA3Q9Y5H0 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC3.47□□□□□ -1.85
PCDHGA3Q9Y5H0 AC006539.3-201ENST00000454258 129 ntBASIC3.47□□□□□ -1.85
PCDHGA3Q9Y5H0 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC3.47□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms