Protein–RNA interactions for Protein: Q9Y3Q4

HCN4, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 4, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN4Q9Y3Q4 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC4.64□□□□□ -1.67
HCN4Q9Y3Q4 AC009093.8-201ENST00000641769 292 ntBASIC4.64□□□□□ -1.67
HCN4Q9Y3Q4 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
HCN4Q9Y3Q4 TLK1P1-201ENST00000456760 2440 ntBASIC4.64□□□□□ -1.67
HCN4Q9Y3Q4 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
HCN4Q9Y3Q4 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
HCN4Q9Y3Q4 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
HCN4Q9Y3Q4 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC4.64□□□□□ -1.67
HCN4Q9Y3Q4 AC018529.3-201ENST00000624212 2254 ntBASIC4.63□□□□□ -1.67
HCN4Q9Y3Q4 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
HCN4Q9Y3Q4 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
HCN4Q9Y3Q4 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.63□□□□□ -1.67
HCN4Q9Y3Q4 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.63□□□□□ -1.67
HCN4Q9Y3Q4 BX322639.1-202ENST00000423987 2213 ntBASIC4.63□□□□□ -1.67
HCN4Q9Y3Q4 RNU6-778P-201ENST00000363269 103 ntBASIC4.63□□□□□ -1.67
HCN4Q9Y3Q4 HLFP1-201ENST00000402375 499 ntBASIC4.63□□□□□ -1.67
HCN4Q9Y3Q4 RNU6-1135P-201ENST00000411083 103 ntBASIC4.63□□□□□ -1.67
HCN4Q9Y3Q4 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.63□□□□□ -1.67
HCN4Q9Y3Q4 AC007969.2-201ENST00000441891 191 ntBASIC4.63□□□□□ -1.67
HCN4Q9Y3Q4 AL645939.1-201ENST00000453429 797 ntBASIC4.63□□□□□ -1.67
HCN4Q9Y3Q4 AC078817.1-201ENST00000492623 435 ntBASIC4.63□□□□□ -1.67
HCN4Q9Y3Q4 Vault.1-201ENST00000516474 102 ntBASIC4.63□□□□□ -1.67
HCN4Q9Y3Q4 MIR5695-201ENST00000579717 85 ntBASIC4.63□□□□□ -1.67
HCN4Q9Y3Q4 KLKP1-201ENST00000595979 403 ntBASIC4.63□□□□□ -1.67
HCN4Q9Y3Q4 AL078605.1-201ENST00000603529 500 ntBASIC4.63□□□□□ -1.67
HCN4Q9Y3Q4 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC4.63□□□□□ -1.67
HCN4Q9Y3Q4 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC4.63□□□□□ -1.67
HCN4Q9Y3Q4 IGHVIII-44-202ENST00000636235 289 ntBASIC4.63□□□□□ -1.67
HCN4Q9Y3Q4 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
HCN4Q9Y3Q4 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
HCN4Q9Y3Q4 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
HCN4Q9Y3Q4 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
HCN4Q9Y3Q4 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
HCN4Q9Y3Q4 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
HCN4Q9Y3Q4 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
HCN4Q9Y3Q4 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
HCN4Q9Y3Q4 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
HCN4Q9Y3Q4 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.62□□□□□ -1.67
HCN4Q9Y3Q4 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
HCN4Q9Y3Q4 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
HCN4Q9Y3Q4 Y_RNA.441-201ENST00000384123 112 ntBASIC4.62□□□□□ -1.67
HCN4Q9Y3Q4 RNU6-217P-201ENST00000384164 104 ntBASIC4.62□□□□□ -1.67
HCN4Q9Y3Q4 RNU6-658P-201ENST00000384606 106 ntBASIC4.62□□□□□ -1.67
HCN4Q9Y3Q4 SDHCP2-201ENST00000398565 501 ntBASIC4.62□□□□□ -1.67
HCN4Q9Y3Q4 HIST1H2APS3-201ENST00000403259 134 ntBASIC4.62□□□□□ -1.67
HCN4Q9Y3Q4 RNU6-1001P-201ENST00000411265 100 ntBASIC4.62□□□□□ -1.67
HCN4Q9Y3Q4 RPL26P27-201ENST00000414397 437 ntBASIC4.62□□□□□ -1.67
HCN4Q9Y3Q4 AC074117.2-201ENST00000417130 397 ntBASIC4.62□□□□□ -1.67
HCN4Q9Y3Q4 CKS1BP6-201ENST00000424932 240 ntBASIC4.62□□□□□ -1.67
HCN4Q9Y3Q4 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC4.62□□□□□ -1.67
HCN4Q9Y3Q4 RPS29P2-201ENST00000479278 136 ntBASIC4.62□□□□□ -1.67
HCN4Q9Y3Q4 RPL36AP41-201ENST00000493820 306 ntBASIC4.62□□□□□ -1.67
HCN4Q9Y3Q4 AP005660.1-201ENST00000522972 293 ntBASIC4.62□□□□□ -1.67
HCN4Q9Y3Q4 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.62□□□□□ -1.67
HCN4Q9Y3Q4 RPL21P9-201ENST00000556149 474 ntBASIC4.62□□□□□ -1.67
HCN4Q9Y3Q4 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC4.62□□□□□ -1.67
HCN4Q9Y3Q4 UBL5P4-201ENST00000562584 236 ntBASIC4.62□□□□□ -1.67
HCN4Q9Y3Q4 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC4.62□□□□□ -1.67
HCN4Q9Y3Q4 AC104984.5-201ENST00000586878 94 ntBASIC4.62□□□□□ -1.67
HCN4Q9Y3Q4 MIR6134-201ENST00000617606 109 ntBASIC4.62□□□□□ -1.67
HCN4Q9Y3Q4 MIR6852-201ENST00000621699 66 ntBASIC4.62□□□□□ -1.67
HCN4Q9Y3Q4 AC006001.4-201ENST00000622243 395 ntBASIC4.62□□□□□ -1.67
HCN4Q9Y3Q4 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.62□□□□□ -1.67
HCN4Q9Y3Q4 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.62□□□□□ -1.67
HCN4Q9Y3Q4 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
HCN4Q9Y3Q4 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
HCN4Q9Y3Q4 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.62□□□□□ -1.67
HCN4Q9Y3Q4 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.62□□□□□ -1.67
HCN4Q9Y3Q4 AC135776.4-201ENST00000624300 1904 ntBASIC4.62□□□□□ -1.67
HCN4Q9Y3Q4 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
HCN4Q9Y3Q4 SRP72P2-201ENST00000344851 1979 ntBASIC4.62□□□□□ -1.67
HCN4Q9Y3Q4 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.62□□□□□ -1.67
HCN4Q9Y3Q4 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.62□□□□□ -1.67
HCN4Q9Y3Q4 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
HCN4Q9Y3Q4 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.61□□□□□ -1.67
HCN4Q9Y3Q4 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
HCN4Q9Y3Q4 SNORA7.2-201ENST00000364446 145 ntBASIC4.61□□□□□ -1.67
HCN4Q9Y3Q4 RNU6-213P-201ENST00000384051 104 ntBASIC4.61□□□□□ -1.67
HCN4Q9Y3Q4 SNORD116-20-201ENST00000384529 92 ntBASIC4.61□□□□□ -1.67
HCN4Q9Y3Q4 RNU6-1197P-201ENST00000391183 107 ntBASIC4.61□□□□□ -1.67
HCN4Q9Y3Q4 POLR2KP2-201ENST00000438155 177 ntBASIC4.61□□□□□ -1.67
HCN4Q9Y3Q4 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC4.61□□□□□ -1.67
HCN4Q9Y3Q4 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.61□□□□□ -1.67
HCN4Q9Y3Q4 AC023141.12-201ENST00000512399 199 ntBASIC4.61□□□□□ -1.67
HCN4Q9Y3Q4 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC4.61□□□□□ -1.67
HCN4Q9Y3Q4 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC4.61□□□□□ -1.67
HCN4Q9Y3Q4 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC4.61□□□□□ -1.67
HCN4Q9Y3Q4 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC4.61□□□□□ -1.67
HCN4Q9Y3Q4 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.61□□□□□ -1.67
HCN4Q9Y3Q4 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
HCN4Q9Y3Q4 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
HCN4Q9Y3Q4 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.61□□□□□ -1.67
HCN4Q9Y3Q4 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
HCN4Q9Y3Q4 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
HCN4Q9Y3Q4 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
HCN4Q9Y3Q4 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
HCN4Q9Y3Q4 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
HCN4Q9Y3Q4 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
HCN4Q9Y3Q4 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
HCN4Q9Y3Q4 RNU6-923P-201ENST00000364753 107 ntBASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 166.4 ms