Protein–RNA interactions for Protein: Q9Y3E1

HDGFL3, Hepatoma-derived growth factor-related protein 3, humanhuman

Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3Q9Y3E1 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
HDGFL3Q9Y3E1 Y_RNA.99-201ENST00000363138 105 ntBASIC1.17□□□□□ -2.22
HDGFL3Q9Y3E1 SNORA7.1-201ENST00000363750 139 ntBASIC1.17□□□□□ -2.22
HDGFL3Q9Y3E1 RNU2-36P-201ENST00000410361 191 ntBASIC1.17□□□□□ -2.22
HDGFL3Q9Y3E1 RNU2-23P-201ENST00000410545 195 ntBASIC1.17□□□□□ -2.22
HDGFL3Q9Y3E1 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.17□□□□□ -2.22
HDGFL3Q9Y3E1 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC1.17□□□□□ -2.22
HDGFL3Q9Y3E1 AP1B1P2-201ENST00000416196 106 ntBASIC1.17□□□□□ -2.22
HDGFL3Q9Y3E1 BTF3P4-201ENST00000418852 495 ntBASIC1.17□□□□□ -2.22
HDGFL3Q9Y3E1 AL365338.1-201ENST00000422282 858 ntBASIC1.17□□□□□ -2.22
HDGFL3Q9Y3E1 SLC44A3-AS1-205ENST00000424505 612 ntBASIC1.17□□□□□ -2.22
HDGFL3Q9Y3E1 SDAD1P3-201ENST00000427380 333 ntBASIC1.17□□□□□ -2.22
HDGFL3Q9Y3E1 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC1.17□□□□□ -2.22
HDGFL3Q9Y3E1 HMGB1P31-201ENST00000437242 427 ntBASIC1.17□□□□□ -2.22
HDGFL3Q9Y3E1 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC1.17□□□□□ -2.22
HDGFL3Q9Y3E1 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC1.17□□□□□ -2.22
HDGFL3Q9Y3E1 AC112492.4-201ENST00000456549 352 ntBASIC1.17□□□□□ -2.22
HDGFL3Q9Y3E1 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
HDGFL3Q9Y3E1 RNU6-237P-201ENST00000515985 71 ntBASIC1.17□□□□□ -2.22
HDGFL3Q9Y3E1 RNU6-677P-201ENST00000516914 101 ntBASIC1.17□□□□□ -2.22
HDGFL3Q9Y3E1 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC1.17□□□□□ -2.22
HDGFL3Q9Y3E1 AC087441.2-201ENST00000529141 262 ntBASIC1.17□□□□□ -2.22
HDGFL3Q9Y3E1 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC1.17□□□□□ -2.22
HDGFL3Q9Y3E1 AC008269.2-201ENST00000561915 1105 ntBASIC1.17□□□□□ -2.22
HDGFL3Q9Y3E1 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.17□□□□□ -2.22
HDGFL3Q9Y3E1 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.17□□□□□ -2.22
HDGFL3Q9Y3E1 MIR544B-201ENST00000582372 78 ntBASIC1.17□□□□□ -2.22
HDGFL3Q9Y3E1 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC1.17□□□□□ -2.22
HDGFL3Q9Y3E1 KC877982.1-201ENST00000602313 470 ntBASIC1.17□□□□□ -2.22
HDGFL3Q9Y3E1 AC012065.4-201ENST00000602445 679 ntBASIC1.17□□□□□ -2.22
HDGFL3Q9Y3E1 AC112220.3-201ENST00000605502 502 ntBASIC1.17□□□□□ -2.22
HDGFL3Q9Y3E1 PRR13P7-201ENST00000605538 430 ntBASIC1.17□□□□□ -2.22
HDGFL3Q9Y3E1 AC072039.2-201ENST00000608883 439 ntBASIC1.17□□□□□ -2.22
HDGFL3Q9Y3E1 PART1_2.1-201ENST00000612397 250 ntBASIC1.17□□□□□ -2.22
HDGFL3Q9Y3E1 AC130324.3-201ENST00000614165 542 ntBASIC1.17□□□□□ -2.22
HDGFL3Q9Y3E1 AC021755.4-201ENST00000616620 456 ntBASIC1.17□□□□□ -2.22
HDGFL3Q9Y3E1 AC006338.1-201ENST00000618453 749 ntBASIC1.17□□□□□ -2.22
HDGFL3Q9Y3E1 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.17□□□□□ -2.22
HDGFL3Q9Y3E1 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.17□□□□□ -2.22
HDGFL3Q9Y3E1 AP000560.1-201ENST00000624150 1937 ntBASIC1.17□□□□□ -2.22
HDGFL3Q9Y3E1 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
HDGFL3Q9Y3E1 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
HDGFL3Q9Y3E1 Y_RNA.140-201ENST00000363474 103 ntBASIC1.16□□□□□ -2.22
HDGFL3Q9Y3E1 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.16□□□□□ -2.22
HDGFL3Q9Y3E1 SNORA40.6-201ENST00000391153 128 ntBASIC1.16□□□□□ -2.22
HDGFL3Q9Y3E1 AL136310.1-201ENST00000404926 654 ntBASIC1.16□□□□□ -2.22
HDGFL3Q9Y3E1 AC009518.2-201ENST00000418056 731 ntBASIC1.16□□□□□ -2.22
HDGFL3Q9Y3E1 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.16□□□□□ -2.22
HDGFL3Q9Y3E1 AL583843.1-201ENST00000456070 346 ntBASIC1.16□□□□□ -2.22
HDGFL3Q9Y3E1 SNORA19.3-201ENST00000516165 130 ntBASIC1.16□□□□□ -2.22
HDGFL3Q9Y3E1 RNA5SP458-201ENST00000516188 119 ntBASIC1.16□□□□□ -2.22
HDGFL3Q9Y3E1 RNVU1-2-201ENST00000516326 135 ntBASIC1.16□□□□□ -2.22
HDGFL3Q9Y3E1 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.16□□□□□ -2.22
HDGFL3Q9Y3E1 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC1.16□□□□□ -2.22
HDGFL3Q9Y3E1 AP003033.1-201ENST00000527244 415 ntBASIC1.16□□□□□ -2.22
HDGFL3Q9Y3E1 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.16□□□□□ -2.22
HDGFL3Q9Y3E1 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.16□□□□□ -2.22
HDGFL3Q9Y3E1 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.16□□□□□ -2.22
HDGFL3Q9Y3E1 MIR3660-201ENST00000584845 100 ntBASIC1.16□□□□□ -2.22
HDGFL3Q9Y3E1 AL670379.2-201ENST00000604983 252 ntBASIC1.16□□□□□ -2.22
HDGFL3Q9Y3E1 AL670379.4-201ENST00000605279 254 ntBASIC1.16□□□□□ -2.22
HDGFL3Q9Y3E1 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
HDGFL3Q9Y3E1 RNU6-511P-201ENST00000363496 107 ntBASIC1.15□□□□□ -2.23
HDGFL3Q9Y3E1 SNORD116.1-201ENST00000365628 92 ntBASIC1.15□□□□□ -2.23
HDGFL3Q9Y3E1 RNU6-439P-201ENST00000384188 106 ntBASIC1.15□□□□□ -2.23
HDGFL3Q9Y3E1 RNU6-72P-201ENST00000384285 79 ntBASIC1.15□□□□□ -2.23
HDGFL3Q9Y3E1 Y_RNA.465-201ENST00000384293 102 ntBASIC1.15□□□□□ -2.23
HDGFL3Q9Y3E1 MIR29B2-201ENST00000385055 81 ntBASIC1.15□□□□□ -2.23
HDGFL3Q9Y3E1 BTF3L4P2-201ENST00000392798 346 ntBASIC1.15□□□□□ -2.23
HDGFL3Q9Y3E1 ELOCP17-201ENST00000414751 326 ntBASIC1.15□□□□□ -2.23
HDGFL3Q9Y3E1 ELOCP9-201ENST00000418624 239 ntBASIC1.15□□□□□ -2.23
HDGFL3Q9Y3E1 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC1.15□□□□□ -2.23
HDGFL3Q9Y3E1 AL121601.2-201ENST00000438019 707 ntBASIC1.15□□□□□ -2.23
HDGFL3Q9Y3E1 AL354941.1-201ENST00000438600 464 ntBASIC1.15□□□□□ -2.23
HDGFL3Q9Y3E1 PTENP1-201ENST00000447117 1215 ntBASIC1.15□□□□□ -2.23
HDGFL3Q9Y3E1 AC012308.1-201ENST00000451232 178 ntBASIC1.15□□□□□ -2.23
HDGFL3Q9Y3E1 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
HDGFL3Q9Y3E1 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.15□□□□□ -2.23
HDGFL3Q9Y3E1 AC093899.1-201ENST00000457984 376 ntBASIC1.15□□□□□ -2.23
HDGFL3Q9Y3E1 AC005908.1-201ENST00000468701 347 ntBASIC1.15□□□□□ -2.23
HDGFL3Q9Y3E1 AC004223.1-201ENST00000479840 271 ntBASIC1.15□□□□□ -2.23
HDGFL3Q9Y3E1 AC016550.1-201ENST00000505348 785 ntBASIC1.15□□□□□ -2.23
HDGFL3Q9Y3E1 MTCYBP40-201ENST00000509390 1135 ntBASIC1.15□□□□□ -2.23
HDGFL3Q9Y3E1 AC093259.1-201ENST00000509755 300 ntBASIC1.15□□□□□ -2.23
HDGFL3Q9Y3E1 AC010587.2-201ENST00000511727 448 ntBASIC1.15□□□□□ -2.23
HDGFL3Q9Y3E1 RNU6-276P-201ENST00000516114 96 ntBASIC1.15□□□□□ -2.23
HDGFL3Q9Y3E1 RNU6-991P-201ENST00000516168 107 ntBASIC1.15□□□□□ -2.23
HDGFL3Q9Y3E1 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC1.15□□□□□ -2.23
HDGFL3Q9Y3E1 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
HDGFL3Q9Y3E1 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC1.15□□□□□ -2.23
HDGFL3Q9Y3E1 SUB1P3-201ENST00000564581 315 ntBASIC1.15□□□□□ -2.23
HDGFL3Q9Y3E1 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC1.15□□□□□ -2.23
HDGFL3Q9Y3E1 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.15□□□□□ -2.23
HDGFL3Q9Y3E1 AL022154.1-201ENST00000604698 785 ntBASIC1.15□□□□□ -2.23
HDGFL3Q9Y3E1 MIR15A-201ENST00000607334 83 ntBASIC1.15□□□□□ -2.23
HDGFL3Q9Y3E1 MIR8074-201ENST00000615081 81 ntBASIC1.15□□□□□ -2.23
HDGFL3Q9Y3E1 uc_338.12-201ENST00000616344 181 ntBASIC1.15□□□□□ -2.23
HDGFL3Q9Y3E1 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC1.15□□□□□ -2.23
HDGFL3Q9Y3E1 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.14□□□□□ -2.23
HDGFL3Q9Y3E1 RNU6-723P-201ENST00000383973 107 ntBASIC1.14□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 89.4 ms