Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 CCDC58P2-201ENST00000417131 366 ntBASIC0.1□□□□□ -2.39
UBE2D4Q9Y2X8 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC0.1□□□□□ -2.39
UBE2D4Q9Y2X8 PPP1R11P2-201ENST00000423543 382 ntBASIC0.1□□□□□ -2.39
UBE2D4Q9Y2X8 HSPE1P9-201ENST00000440046 311 ntBASIC0.1□□□□□ -2.39
UBE2D4Q9Y2X8 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC0.1□□□□□ -2.39
UBE2D4Q9Y2X8 AC011005.2-201ENST00000487324 359 ntBASIC0.1□□□□□ -2.39
UBE2D4Q9Y2X8 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC0.1□□□□□ -2.39
UBE2D4Q9Y2X8 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC0.1□□□□□ -2.39
UBE2D4Q9Y2X8 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC0.1□□□□□ -2.39
UBE2D4Q9Y2X8 Y_RNA.670-201ENST00000516255 105 ntBASIC0.1□□□□□ -2.39
UBE2D4Q9Y2X8 RNA5SP168-201ENST00000516642 112 ntBASIC0.1□□□□□ -2.39
UBE2D4Q9Y2X8 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC0.1□□□□□ -2.39
UBE2D4Q9Y2X8 TRAV32-201ENST00000553993 340 ntBASIC0.1□□□□□ -2.39
UBE2D4Q9Y2X8 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC0.1□□□□□ -2.39
UBE2D4Q9Y2X8 AC068790.6-201ENST00000602558 258 ntBASIC0.1□□□□□ -2.39
UBE2D4Q9Y2X8 Z83818.1-201ENST00000603584 150 ntBASIC0.1□□□□□ -2.39
UBE2D4Q9Y2X8 AC239868.4-201ENST00000608318 671 ntBASIC0.1□□□□□ -2.39
UBE2D4Q9Y2X8 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC0.1□□□□□ -2.39
UBE2D4Q9Y2X8 AC243773.3-201ENST00000613270 256 ntBASIC0.1□□□□□ -2.39
UBE2D4Q9Y2X8 AC104820.1-201ENST00000624183 307 ntBASIC0.1□□□□□ -2.39
UBE2D4Q9Y2X8 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC0.1□□□□□ -2.39
UBE2D4Q9Y2X8 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC0.1□□□□□ -2.39
UBE2D4Q9Y2X8 AC068647.2-201ENST00000637380 353 ntBASIC0.1□□□□□ -2.39
UBE2D4Q9Y2X8 MTCO1P23-201ENST00000415223 1526 ntBASIC0.09□□□□□ -2.39
UBE2D4Q9Y2X8 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC0.09□□□□□ -2.4
UBE2D4Q9Y2X8 RNU6-349P-201ENST00000362402 107 ntBASIC0.09□□□□□ -2.4
UBE2D4Q9Y2X8 RNU6-543P-201ENST00000362576 108 ntBASIC0.09□□□□□ -2.4
UBE2D4Q9Y2X8 RNU6-546P-201ENST00000383991 107 ntBASIC0.09□□□□□ -2.4
UBE2D4Q9Y2X8 RNU6-296P-201ENST00000384608 107 ntBASIC0.09□□□□□ -2.4
UBE2D4Q9Y2X8 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.09□□□□□ -2.4
UBE2D4Q9Y2X8 RNA5SP299-201ENST00000391203 116 ntBASIC0.09□□□□□ -2.4
UBE2D4Q9Y2X8 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC0.09□□□□□ -2.4
UBE2D4Q9Y2X8 AC104651.1-201ENST00000427559 735 ntBASIC0.09□□□□□ -2.4
UBE2D4Q9Y2X8 RPS15AP9-201ENST00000439856 381 ntBASIC0.09□□□□□ -2.4
UBE2D4Q9Y2X8 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC0.09□□□□□ -2.4
UBE2D4Q9Y2X8 AP003072.2-201ENST00000527756 676 ntBASIC0.09□□□□□ -2.4
UBE2D4Q9Y2X8 AL590705.4-201ENST00000532209 134 ntBASIC0.09□□□□□ -2.4
UBE2D4Q9Y2X8 AC112191.3-201ENST00000604371 277 ntBASIC0.09□□□□□ -2.4
UBE2D4Q9Y2X8 KATNBL1P5-201ENST00000605015 517 ntBASIC0.09□□□□□ -2.4
UBE2D4Q9Y2X8 5S_rRNA.11-201ENST00000618635 84 ntBASIC0.09□□□□□ -2.4
UBE2D4Q9Y2X8 FAS-AS1.2-201ENST00000620386 170 ntBASIC0.09□□□□□ -2.4
UBE2D4Q9Y2X8 Y_RNA.40-201ENST00000362645 93 ntBASIC0.08□□□□□ -2.4
UBE2D4Q9Y2X8 RNU4-67P-201ENST00000364569 141 ntBASIC0.08□□□□□ -2.4
UBE2D4Q9Y2X8 RNU1-119P-201ENST00000391122 165 ntBASIC0.08□□□□□ -2.4
UBE2D4Q9Y2X8 MIR1295A-201ENST00000408463 79 ntBASIC0.08□□□□□ -2.4
UBE2D4Q9Y2X8 RNU2-70P-201ENST00000410718 179 ntBASIC0.08□□□□□ -2.4
UBE2D4Q9Y2X8 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.08□□□□□ -2.4
UBE2D4Q9Y2X8 C8orf59P1-201ENST00000429930 303 ntBASIC0.08□□□□□ -2.4
UBE2D4Q9Y2X8 RPL7P43-201ENST00000478876 753 ntBASIC0.08□□□□□ -2.4
UBE2D4Q9Y2X8 AC098869.1-201ENST00000481627 292 ntBASIC0.08□□□□□ -2.4
UBE2D4Q9Y2X8 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC0.08□□□□□ -2.4
UBE2D4Q9Y2X8 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC0.08□□□□□ -2.4
UBE2D4Q9Y2X8 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC0.08□□□□□ -2.4
UBE2D4Q9Y2X8 AP003392.2-201ENST00000527269 208 ntBASIC0.08□□□□□ -2.4
UBE2D4Q9Y2X8 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC0.08□□□□□ -2.4
UBE2D4Q9Y2X8 AC004805.2-201ENST00000605382 482 ntBASIC0.08□□□□□ -2.4
UBE2D4Q9Y2X8 AL353765.1-201ENST00000605514 183 ntBASIC0.08□□□□□ -2.4
UBE2D4Q9Y2X8 AC013476.2-201ENST00000614456 459 ntBASIC0.08□□□□□ -2.4
UBE2D4Q9Y2X8 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC0.08□□□□□ -2.4
UBE2D4Q9Y2X8 Y_RNA.124-201ENST00000363339 93 ntBASIC0.07□□□□□ -2.4
UBE2D4Q9Y2X8 SNORA51.6-201ENST00000384151 125 ntBASIC0.07□□□□□ -2.4
UBE2D4Q9Y2X8 Y_RNA.466-201ENST00000384294 113 ntBASIC0.07□□□□□ -2.4
UBE2D4Q9Y2X8 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC0.07□□□□□ -2.4
UBE2D4Q9Y2X8 AL356776.1-201ENST00000406574 447 ntBASIC0.07□□□□□ -2.4
UBE2D4Q9Y2X8 AC063976.4-201ENST00000421971 163 ntBASIC0.07□□□□□ -2.4
UBE2D4Q9Y2X8 AC002429.1-201ENST00000437672 148 ntBASIC0.07□□□□□ -2.4
UBE2D4Q9Y2X8 GAPDHP17-201ENST00000449858 1001 ntBASIC0.07□□□□□ -2.4
UBE2D4Q9Y2X8 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC0.07□□□□□ -2.4
UBE2D4Q9Y2X8 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC0.07□□□□□ -2.4
UBE2D4Q9Y2X8 AP003327.1-201ENST00000529684 127 ntBASIC0.07□□□□□ -2.4
UBE2D4Q9Y2X8 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC0.07□□□□□ -2.4
UBE2D4Q9Y2X8 OR6C7P-201ENST00000547875 934 ntBASIC0.07□□□□□ -2.4
UBE2D4Q9Y2X8 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC0.07□□□□□ -2.4
UBE2D4Q9Y2X8 GAS5-AS1-201ENST00000602767 694 ntBASIC0.07□□□□□ -2.4
UBE2D4Q9Y2X8 AL357094.1-201ENST00000603845 844 ntBASIC0.07□□□□□ -2.4
UBE2D4Q9Y2X8 AC112220.2-201ENST00000605513 533 ntBASIC0.07□□□□□ -2.4
UBE2D4Q9Y2X8 AL355802.4-201ENST00000607635 548 ntBASIC0.07□□□□□ -2.4
UBE2D4Q9Y2X8 AC004908.3-201ENST00000610248 625 ntBASIC0.07□□□□□ -2.4
UBE2D4Q9Y2X8 AC009237.15-201ENST00000610252 501 ntBASIC0.07□□□□□ -2.4
UBE2D4Q9Y2X8 AL138955.1-201ENST00000622881 1040 ntBASIC0.07□□□□□ -2.4
UBE2D4Q9Y2X8 AC079416.3-201ENST00000624479 549 ntBASIC0.07□□□□□ -2.4
UBE2D4Q9Y2X8 PLD1-217ENST00000627725 174 ntTSL 5 BASIC0.07□□□□□ -2.4
UBE2D4Q9Y2X8 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC0.07□□□□□ -2.4
UBE2D4Q9Y2X8 Y_RNA.99-201ENST00000363138 105 ntBASIC0.06□□□□□ -2.4
UBE2D4Q9Y2X8 SNORD114-26-201ENST00000363543 72 ntBASIC0.06□□□□□ -2.4
UBE2D4Q9Y2X8 RNU6-1339P-201ENST00000363574 91 ntBASIC0.06□□□□□ -2.4
UBE2D4Q9Y2X8 RNU6-670P-201ENST00000364312 104 ntBASIC0.06□□□□□ -2.4
UBE2D4Q9Y2X8 RNU6-878P-201ENST00000384578 110 ntBASIC0.06□□□□□ -2.4
UBE2D4Q9Y2X8 AC092423.1-201ENST00000430165 186 ntBASIC0.06□□□□□ -2.4
UBE2D4Q9Y2X8 AC005534.2-201ENST00000431047 433 ntBASIC0.06□□□□□ -2.4
UBE2D4Q9Y2X8 RPL36AP53-201ENST00000432891 316 ntBASIC0.06□□□□□ -2.4
UBE2D4Q9Y2X8 AL096829.2-201ENST00000446582 742 ntBASIC0.06□□□□□ -2.4
UBE2D4Q9Y2X8 ATP5J2P3-201ENST00000451550 258 ntBASIC0.06□□□□□ -2.4
UBE2D4Q9Y2X8 RNA5SP269-201ENST00000459032 137 ntBASIC0.06□□□□□ -2.4
UBE2D4Q9Y2X8 AL160314.1-201ENST00000490836 438 ntBASIC0.06□□□□□ -2.4
UBE2D4Q9Y2X8 RNU6-678P-201ENST00000516832 109 ntBASIC0.06□□□□□ -2.4
UBE2D4Q9Y2X8 AC087854.1-201ENST00000519706 414 ntBASIC0.06□□□□□ -2.4
UBE2D4Q9Y2X8 AL121579.1-201ENST00000555129 305 ntBASIC0.06□□□□□ -2.4
UBE2D4Q9Y2X8 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC0.06□□□□□ -2.4
UBE2D4Q9Y2X8 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC0.06□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 121.6 ms