Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 MIR148B-201ENST00000362252 99 ntBASIC3.43□□□□□ -1.86
SSX2IPQ9Y2D8 SNORA75B-201ENST00000384053 137 ntBASIC3.43□□□□□ -1.86
SSX2IPQ9Y2D8 RNU6-95P-201ENST00000384697 107 ntBASIC3.43□□□□□ -1.86
SSX2IPQ9Y2D8 AL590632.1-201ENST00000424289 371 ntBASIC3.43□□□□□ -1.86
SSX2IPQ9Y2D8 RPL23AP82-202ENST00000427528 469 ntBASIC3.43□□□□□ -1.86
SSX2IPQ9Y2D8 BRK1P2-201ENST00000442875 223 ntBASIC3.43□□□□□ -1.86
SSX2IPQ9Y2D8 CENPBD1P1-201ENST00000464061 469 ntBASIC3.43□□□□□ -1.86
SSX2IPQ9Y2D8 RPS23P3-201ENST00000470993 430 ntBASIC3.43□□□□□ -1.86
SSX2IPQ9Y2D8 HMGN2P13-201ENST00000476476 274 ntBASIC3.43□□□□□ -1.86
SSX2IPQ9Y2D8 AC097462.2-201ENST00000504623 481 ntBASIC3.43□□□□□ -1.86
SSX2IPQ9Y2D8 AC092436.3-201ENST00000511788 257 ntBASIC3.43□□□□□ -1.86
SSX2IPQ9Y2D8 RNA5SP385-201ENST00000515947 110 ntBASIC3.43□□□□□ -1.86
SSX2IPQ9Y2D8 AC245166.1-201ENST00000521012 253 ntBASIC3.43□□□□□ -1.86
SSX2IPQ9Y2D8 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC3.43□□□□□ -1.86
SSX2IPQ9Y2D8 AP003072.1-201ENST00000531740 145 ntBASIC3.43□□□□□ -1.86
SSX2IPQ9Y2D8 AC022080.3-201ENST00000544433 482 ntBASIC3.43□□□□□ -1.86
SSX2IPQ9Y2D8 EIF4BP1-201ENST00000554881 351 ntBASIC3.43□□□□□ -1.86
SSX2IPQ9Y2D8 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC3.43□□□□□ -1.86
SSX2IPQ9Y2D8 AL645944.1-201ENST00000603857 493 ntBASIC3.43□□□□□ -1.86
SSX2IPQ9Y2D8 AC004805.2-201ENST00000605382 482 ntBASIC3.43□□□□□ -1.86
SSX2IPQ9Y2D8 AC124303.1-201ENST00000605703 360 ntBASIC3.43□□□□□ -1.86
SSX2IPQ9Y2D8 AC099506.2-201ENST00000623074 221 ntBASIC3.43□□□□□ -1.86
SSX2IPQ9Y2D8 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.43□□□□□ -1.86
SSX2IPQ9Y2D8 ZNF807-201ENST00000328088 1707 ntBASIC3.43□□□□□ -1.86
SSX2IPQ9Y2D8 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.42□□□□□ -1.86
SSX2IPQ9Y2D8 AC092435.3-201ENST00000565538 3654 ntBASIC3.42□□□□□ -1.86
SSX2IPQ9Y2D8 AF117829.1-206ENST00000621883 3802 ntBASIC3.42□□□□□ -1.86
SSX2IPQ9Y2D8 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
SSX2IPQ9Y2D8 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
SSX2IPQ9Y2D8 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
SSX2IPQ9Y2D8 SNORD3E-201ENST00000362899 217 ntBASIC3.42□□□□□ -1.86
SSX2IPQ9Y2D8 SNORD56.3-201ENST00000363507 71 ntBASIC3.42□□□□□ -1.86
SSX2IPQ9Y2D8 Y_RNA.326-201ENST00000365176 113 ntBASIC3.42□□□□□ -1.86
SSX2IPQ9Y2D8 RNU6-1329P-201ENST00000365664 107 ntBASIC3.42□□□□□ -1.86
SSX2IPQ9Y2D8 SNORA7.4-201ENST00000384249 137 ntBASIC3.42□□□□□ -1.86
SSX2IPQ9Y2D8 U3.42-201ENST00000408746 214 ntBASIC3.42□□□□□ -1.86
SSX2IPQ9Y2D8 Y_RNA.623-201ENST00000411128 95 ntBASIC3.42□□□□□ -1.86
SSX2IPQ9Y2D8 AL356968.1-201ENST00000416622 474 ntBASIC3.42□□□□□ -1.86
SSX2IPQ9Y2D8 AL627311.1-201ENST00000431514 115 ntBASIC3.42□□□□□ -1.86
SSX2IPQ9Y2D8 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC3.42□□□□□ -1.86
SSX2IPQ9Y2D8 SNRPEP9-201ENST00000436794 238 ntBASIC3.42□□□□□ -1.86
SSX2IPQ9Y2D8 ELOCP24-201ENST00000456370 334 ntBASIC3.42□□□□□ -1.86
SSX2IPQ9Y2D8 AC009902.1-201ENST00000519351 183 ntBASIC3.42□□□□□ -1.86
SSX2IPQ9Y2D8 AC025755.1-201ENST00000521306 278 ntBASIC3.42□□□□□ -1.86
SSX2IPQ9Y2D8 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC3.42□□□□□ -1.86
SSX2IPQ9Y2D8 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC3.42□□□□□ -1.86
SSX2IPQ9Y2D8 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.42□□□□□ -1.86
SSX2IPQ9Y2D8 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC3.42□□□□□ -1.86
SSX2IPQ9Y2D8 AC005034.5-201ENST00000604219 466 ntBASIC3.42□□□□□ -1.86
SSX2IPQ9Y2D8 AL137843.1-201ENST00000605078 385 ntBASIC3.42□□□□□ -1.86
SSX2IPQ9Y2D8 USP12-203ENST00000620323 349 ntTSL 3 BASIC3.42□□□□□ -1.86
SSX2IPQ9Y2D8 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
SSX2IPQ9Y2D8 AC022336.2-201ENST00000568966 2538 ntBASIC3.42□□□□□ -1.86
SSX2IPQ9Y2D8 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
SSX2IPQ9Y2D8 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
SSX2IPQ9Y2D8 SNORD62.1-201ENST00000362541 86 ntBASIC3.41□□□□□ -1.86
SSX2IPQ9Y2D8 Y_RNA.500-201ENST00000384466 111 ntBASIC3.41□□□□□ -1.86
SSX2IPQ9Y2D8 RNU6-140P-201ENST00000384566 108 ntBASIC3.41□□□□□ -1.86
SSX2IPQ9Y2D8 MIR325-201ENST00000385260 98 ntBASIC3.41□□□□□ -1.86
SSX2IPQ9Y2D8 SNORA40C-201ENST00000391285 128 ntBASIC3.41□□□□□ -1.86
SSX2IPQ9Y2D8 MIR887-201ENST00000401258 79 ntBASIC3.41□□□□□ -1.86
SSX2IPQ9Y2D8 MIR548P-201ENST00000408336 84 ntBASIC3.41□□□□□ -1.86
SSX2IPQ9Y2D8 RNU6-1304P-201ENST00000411374 106 ntBASIC3.41□□□□□ -1.86
SSX2IPQ9Y2D8 AL592148.1-201ENST00000413568 445 ntBASIC3.41□□□□□ -1.86
SSX2IPQ9Y2D8 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
SSX2IPQ9Y2D8 TOMM20P4-201ENST00000427861 435 ntBASIC3.41□□□□□ -1.86
SSX2IPQ9Y2D8 AL512844.2-201ENST00000433990 593 ntBASIC3.41□□□□□ -1.86
SSX2IPQ9Y2D8 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC3.41□□□□□ -1.86
SSX2IPQ9Y2D8 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
SSX2IPQ9Y2D8 RPL30P15-201ENST00000457129 321 ntBASIC3.41□□□□□ -1.86
SSX2IPQ9Y2D8 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.41□□□□□ -1.86
SSX2IPQ9Y2D8 MTCYBP40-201ENST00000509390 1135 ntBASIC3.41□□□□□ -1.86
SSX2IPQ9Y2D8 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.41□□□□□ -1.86
SSX2IPQ9Y2D8 RNU4ATAC7P-201ENST00000516280 125 ntBASIC3.41□□□□□ -1.86
SSX2IPQ9Y2D8 Y_RNA.708-201ENST00000516950 96 ntBASIC3.41□□□□□ -1.86
SSX2IPQ9Y2D8 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.41□□□□□ -1.86
SSX2IPQ9Y2D8 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC3.41□□□□□ -1.86
SSX2IPQ9Y2D8 RGS4-209ENST00000531057 544 ntTSL 4 BASIC3.41□□□□□ -1.86
SSX2IPQ9Y2D8 AC020661.2-201ENST00000560114 134 ntBASIC3.41□□□□□ -1.86
SSX2IPQ9Y2D8 AC022432.1-201ENST00000595739 310 ntBASIC3.41□□□□□ -1.86
SSX2IPQ9Y2D8 ELOCP5-201ENST00000604924 333 ntBASIC3.41□□□□□ -1.86
SSX2IPQ9Y2D8 AL080274.1-201ENST00000605565 220 ntBASIC3.41□□□□□ -1.86
SSX2IPQ9Y2D8 PART1_1.1-201ENST00000611761 217 ntBASIC3.41□□□□□ -1.86
SSX2IPQ9Y2D8 PISRT1.1-201ENST00000616930 107 ntBASIC3.41□□□□□ -1.86
SSX2IPQ9Y2D8 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.41□□□□□ -1.86
SSX2IPQ9Y2D8 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.41□□□□□ -1.86
SSX2IPQ9Y2D8 MTND5P10-201ENST00000603719 1809 ntBASIC3.41□□□□□ -1.86
SSX2IPQ9Y2D8 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC3.41□□□□□ -1.86
SSX2IPQ9Y2D8 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.41□□□□□ -1.86
SSX2IPQ9Y2D8 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.4□□□□□ -1.86
SSX2IPQ9Y2D8 RNU1-70P-201ENST00000362618 164 ntBASIC3.4□□□□□ -1.87
SSX2IPQ9Y2D8 RNU6-384P-201ENST00000364900 104 ntBASIC3.4□□□□□ -1.87
SSX2IPQ9Y2D8 Y_RNA.510-201ENST00000384511 114 ntBASIC3.4□□□□□ -1.87
SSX2IPQ9Y2D8 MIR559-201ENST00000385188 96 ntBASIC3.4□□□□□ -1.87
SSX2IPQ9Y2D8 RN7SKP123-201ENST00000410732 291 ntBASIC3.4□□□□□ -1.87
SSX2IPQ9Y2D8 AL096701.2-201ENST00000416920 238 ntBASIC3.4□□□□□ -1.87
SSX2IPQ9Y2D8 AC236972.1-201ENST00000433225 199 ntBASIC3.4□□□□□ -1.87
SSX2IPQ9Y2D8 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.4□□□□□ -1.87
SSX2IPQ9Y2D8 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC3.4□□□□□ -1.87
SSX2IPQ9Y2D8 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC3.4□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms