Protein–RNA interactions for Protein: Q9UPM8

AP4E1, AP-4 complex subunit epsilon-1, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1Q9UPM8 SNORA31.9-201ENST00000516429 84 ntBASIC4.22□□□□□ -1.73
AP4E1Q9UPM8 MTND5P41-201ENST00000517498 206 ntBASIC4.22□□□□□ -1.73
AP4E1Q9UPM8 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC4.22□□□□□ -1.73
AP4E1Q9UPM8 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.22□□□□□ -1.73
AP4E1Q9UPM8 AC027288.2-201ENST00000553028 243 ntBASIC4.22□□□□□ -1.73
AP4E1Q9UPM8 AP002826.1-201ENST00000608835 315 ntBASIC4.22□□□□□ -1.73
AP4E1Q9UPM8 MIR378J-201ENST00000611988 109 ntBASIC4.22□□□□□ -1.73
AP4E1Q9UPM8 UBE2Q2P6-201ENST00000612666 153 ntBASIC4.22□□□□□ -1.73
AP4E1Q9UPM8 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC4.22□□□□□ -1.73
AP4E1Q9UPM8 MIR6716-201ENST00000613413 80 ntBASIC4.22□□□□□ -1.73
AP4E1Q9UPM8 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
AP4E1Q9UPM8 MIR6830-201ENST00000636015 70 ntBASIC4.22□□□□□ -1.73
AP4E1Q9UPM8 AL773545.4-201ENST00000637262 310 ntBASIC4.22□□□□□ -1.73
AP4E1Q9UPM8 AL513478.4-201ENST00000641636 310 ntBASIC4.22□□□□□ -1.73
AP4E1Q9UPM8 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
AP4E1Q9UPM8 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
AP4E1Q9UPM8 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.22□□□□□ -1.73
AP4E1Q9UPM8 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.73
AP4E1Q9UPM8 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.21□□□□□ -1.74
AP4E1Q9UPM8 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
AP4E1Q9UPM8 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.21□□□□□ -1.74
AP4E1Q9UPM8 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
AP4E1Q9UPM8 SNORA25.1-201ENST00000362326 128 ntBASIC4.21□□□□□ -1.74
AP4E1Q9UPM8 Y_RNA.233-201ENST00000364407 101 ntBASIC4.21□□□□□ -1.74
AP4E1Q9UPM8 Y_RNA.570-201ENST00000384750 101 ntBASIC4.21□□□□□ -1.74
AP4E1Q9UPM8 UBA52P6-201ENST00000399822 382 ntBASIC4.21□□□□□ -1.74
AP4E1Q9UPM8 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
AP4E1Q9UPM8 U3.37-201ENST00000408528 213 ntBASIC4.21□□□□□ -1.74
AP4E1Q9UPM8 RNU5A-5P-201ENST00000411054 116 ntBASIC4.21□□□□□ -1.74
AP4E1Q9UPM8 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC4.21□□□□□ -1.74
AP4E1Q9UPM8 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC4.21□□□□□ -1.74
AP4E1Q9UPM8 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
AP4E1Q9UPM8 Z82210.1-201ENST00000440037 231 ntBASIC4.21□□□□□ -1.74
AP4E1Q9UPM8 AL353748.1-201ENST00000440753 474 ntBASIC4.21□□□□□ -1.74
AP4E1Q9UPM8 AC124916.1-201ENST00000444020 547 ntBASIC4.21□□□□□ -1.74
AP4E1Q9UPM8 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC4.21□□□□□ -1.74
AP4E1Q9UPM8 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC4.21□□□□□ -1.74
AP4E1Q9UPM8 NDUFS5P3-201ENST00000450668 321 ntBASIC4.21□□□□□ -1.74
AP4E1Q9UPM8 RPS23P7-201ENST00000466210 444 ntBASIC4.21□□□□□ -1.74
AP4E1Q9UPM8 RN7SKP122-201ENST00000515923 296 ntBASIC4.21□□□□□ -1.74
AP4E1Q9UPM8 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC4.21□□□□□ -1.74
AP4E1Q9UPM8 AP004607.1-201ENST00000524456 203 ntBASIC4.21□□□□□ -1.74
AP4E1Q9UPM8 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC4.21□□□□□ -1.74
AP4E1Q9UPM8 ZNF192P1-203ENST00000565888 810 ntBASIC4.21□□□□□ -1.74
AP4E1Q9UPM8 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC4.21□□□□□ -1.74
AP4E1Q9UPM8 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
AP4E1Q9UPM8 AC024153.1-201ENST00000603103 365 ntBASIC4.21□□□□□ -1.74
AP4E1Q9UPM8 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
AP4E1Q9UPM8 AC008725.1-201ENST00000605123 2263 ntBASIC4.21□□□□□ -1.74
AP4E1Q9UPM8 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.21□□□□□ -1.74
AP4E1Q9UPM8 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
AP4E1Q9UPM8 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
AP4E1Q9UPM8 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.21□□□□□ -1.74
AP4E1Q9UPM8 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.21□□□□□ -1.74
AP4E1Q9UPM8 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.2□□□□□ -1.74
AP4E1Q9UPM8 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.2□□□□□ -1.74
AP4E1Q9UPM8 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC4.2□□□□□ -1.74
AP4E1Q9UPM8 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
AP4E1Q9UPM8 U3.15-201ENST00000365398 212 ntBASIC4.2□□□□□ -1.74
AP4E1Q9UPM8 CRP-203ENST00000368111 512 ntTSL 3 BASIC4.2□□□□□ -1.74
AP4E1Q9UPM8 Y_RNA.418-201ENST00000384029 102 ntBASIC4.2□□□□□ -1.74
AP4E1Q9UPM8 Y_RNA.446-201ENST00000384178 104 ntBASIC4.2□□□□□ -1.74
AP4E1Q9UPM8 RNU6-804P-201ENST00000384286 107 ntBASIC4.2□□□□□ -1.74
AP4E1Q9UPM8 RNU6-21P-201ENST00000384710 107 ntBASIC4.2□□□□□ -1.74
AP4E1Q9UPM8 MIR10B-201ENST00000385011 110 ntBASIC4.2□□□□□ -1.74
AP4E1Q9UPM8 MIR518D-201ENST00000385014 87 ntBASIC4.2□□□□□ -1.74
AP4E1Q9UPM8 AL451074.5-201ENST00000415894 435 ntBASIC4.2□□□□□ -1.74
AP4E1Q9UPM8 EIF1AXP1-201ENST00000419267 435 ntBASIC4.2□□□□□ -1.74
AP4E1Q9UPM8 AL590383.1-201ENST00000428602 75 ntBASIC4.2□□□□□ -1.74
AP4E1Q9UPM8 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.2□□□□□ -1.74
AP4E1Q9UPM8 AC243964.1-201ENST00000441814 261 ntBASIC4.2□□□□□ -1.74
AP4E1Q9UPM8 AL451050.1-201ENST00000450126 415 ntBASIC4.2□□□□□ -1.74
AP4E1Q9UPM8 SSXP4-201ENST00000451349 245 ntBASIC4.2□□□□□ -1.74
AP4E1Q9UPM8 SNORD2.1-201ENST00000458762 69 ntBASIC4.2□□□□□ -1.74
AP4E1Q9UPM8 AC091959.1-201ENST00000495857 238 ntBASIC4.2□□□□□ -1.74
AP4E1Q9UPM8 AC108043.1-201ENST00000512696 574 ntBASIC4.2□□□□□ -1.74
AP4E1Q9UPM8 RN7SKP49-201ENST00000516675 260 ntBASIC4.2□□□□□ -1.74
AP4E1Q9UPM8 RNU6-567P-201ENST00000516746 107 ntBASIC4.2□□□□□ -1.74
AP4E1Q9UPM8 RNU7-110P-201ENST00000516891 62 ntBASIC4.2□□□□□ -1.74
AP4E1Q9UPM8 RNU6-703P-201ENST00000516946 107 ntBASIC4.2□□□□□ -1.74
AP4E1Q9UPM8 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC4.2□□□□□ -1.74
AP4E1Q9UPM8 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC4.2□□□□□ -1.74
AP4E1Q9UPM8 H3F3AP1-201ENST00000559984 334 ntBASIC4.2□□□□□ -1.74
AP4E1Q9UPM8 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC4.2□□□□□ -1.74
AP4E1Q9UPM8 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.2□□□□□ -1.74
AP4E1Q9UPM8 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.2□□□□□ -1.74
AP4E1Q9UPM8 Clostridiales-1.2-201ENST00000636724 160 ntBASIC4.2□□□□□ -1.74
AP4E1Q9UPM8 U6.99-201ENST00000637524 83 ntBASIC4.2□□□□□ -1.74
AP4E1Q9UPM8 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC4.2□□□□□ -1.74
AP4E1Q9UPM8 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
AP4E1Q9UPM8 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
AP4E1Q9UPM8 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.2□□□□□ -1.74
AP4E1Q9UPM8 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC4.19□□□□□ -1.74
AP4E1Q9UPM8 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
AP4E1Q9UPM8 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
AP4E1Q9UPM8 U8.10-201ENST00000384260 133 ntBASIC4.19□□□□□ -1.74
AP4E1Q9UPM8 SNORA3C-201ENST00000408792 125 ntBASIC4.19□□□□□ -1.74
AP4E1Q9UPM8 RNU6-394P-201ENST00000410735 107 ntBASIC4.19□□□□□ -1.74
AP4E1Q9UPM8 RNA5SP39-201ENST00000411245 120 ntBASIC4.19□□□□□ -1.74
AP4E1Q9UPM8 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 89.1 ms