Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 AP001506.1-201ENST00000615444 211 ntBASIC1.98□□□□□ -2.09
NPIPA1Q9UND3 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC1.98□□□□□ -2.09
NPIPA1Q9UND3 AC009831.4-201ENST00000620744 325 ntBASIC1.98□□□□□ -2.09
NPIPA1Q9UND3 MIR219B-201ENST00000637023 88 ntBASIC1.98□□□□□ -2.09
NPIPA1Q9UND3 AC005336.3-201ENST00000623833 2679 ntBASIC1.98□□□□□ -2.09
NPIPA1Q9UND3 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.98□□□□□ -2.09
NPIPA1Q9UND3 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC1.97□□□□□ -2.09
NPIPA1Q9UND3 AL359851.1-201ENST00000569460 4997 ntBASIC1.97□□□□□ -2.09
NPIPA1Q9UND3 SNORD115-7-201ENST00000365306 82 ntBASIC1.97□□□□□ -2.09
NPIPA1Q9UND3 MIR186-201ENST00000384988 86 ntBASIC1.97□□□□□ -2.09
NPIPA1Q9UND3 MIR764-201ENST00000390811 85 ntBASIC1.97□□□□□ -2.09
NPIPA1Q9UND3 AL591034.2-201ENST00000402839 359 ntBASIC1.97□□□□□ -2.09
NPIPA1Q9UND3 MTND2P18-201ENST00000419962 1030 ntBASIC1.97□□□□□ -2.09
NPIPA1Q9UND3 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC1.97□□□□□ -2.09
NPIPA1Q9UND3 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC1.97□□□□□ -2.09
NPIPA1Q9UND3 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC1.97□□□□□ -2.09
NPIPA1Q9UND3 MTCO3P5-201ENST00000433620 714 ntBASIC1.97□□□□□ -2.09
NPIPA1Q9UND3 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC1.97□□□□□ -2.09
NPIPA1Q9UND3 AC009961.2-201ENST00000435771 251 ntBASIC1.97□□□□□ -2.09
NPIPA1Q9UND3 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC1.97□□□□□ -2.09
NPIPA1Q9UND3 HMGB1P31-201ENST00000437242 427 ntBASIC1.97□□□□□ -2.09
NPIPA1Q9UND3 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC1.97□□□□□ -2.09
NPIPA1Q9UND3 AC104058.1-201ENST00000448028 297 ntBASIC1.97□□□□□ -2.09
NPIPA1Q9UND3 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC1.97□□□□□ -2.09
NPIPA1Q9UND3 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC1.97□□□□□ -2.09
NPIPA1Q9UND3 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC1.97□□□□□ -2.09
NPIPA1Q9UND3 AC108210.2-201ENST00000503681 201 ntBASIC1.97□□□□□ -2.09
NPIPA1Q9UND3 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC1.97□□□□□ -2.09
NPIPA1Q9UND3 AC091965.2-201ENST00000512324 613 ntBASIC1.97□□□□□ -2.09
NPIPA1Q9UND3 RNU1-86P-201ENST00000516108 154 ntBASIC1.97□□□□□ -2.09
NPIPA1Q9UND3 RNU2-53P-201ENST00000516257 147 ntBASIC1.97□□□□□ -2.09
NPIPA1Q9UND3 RNU1-107P-201ENST00000516617 154 ntBASIC1.97□□□□□ -2.09
NPIPA1Q9UND3 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC1.97□□□□□ -2.09
NPIPA1Q9UND3 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC1.97□□□□□ -2.09
NPIPA1Q9UND3 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC1.97□□□□□ -2.09
NPIPA1Q9UND3 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC1.97□□□□□ -2.09
NPIPA1Q9UND3 CLIC4P2-201ENST00000601934 717 ntBASIC1.97□□□□□ -2.09
NPIPA1Q9UND3 Z84480.1-201ENST00000605131 311 ntBASIC1.97□□□□□ -2.09
NPIPA1Q9UND3 BNIP3P10-201ENST00000605360 577 ntBASIC1.97□□□□□ -2.09
NPIPA1Q9UND3 AL121917.1-203ENST00000605534 577 ntBASIC1.97□□□□□ -2.09
NPIPA1Q9UND3 AC022202.1-201ENST00000613515 211 ntBASIC1.97□□□□□ -2.09
NPIPA1Q9UND3 uc_338.15-201ENST00000615470 191 ntBASIC1.97□□□□□ -2.09
NPIPA1Q9UND3 AC008121.3-201ENST00000618726 433 ntBASIC1.97□□□□□ -2.09
NPIPA1Q9UND3 AC026585.1-201ENST00000619582 524 ntBASIC1.97□□□□□ -2.09
NPIPA1Q9UND3 SCARNA4-202ENST00000625402 129 ntBASIC1.97□□□□□ -2.09
NPIPA1Q9UND3 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC1.97□□□□□ -2.09
NPIPA1Q9UND3 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC1.97□□□□□ -2.09
NPIPA1Q9UND3 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
NPIPA1Q9UND3 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
NPIPA1Q9UND3 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
NPIPA1Q9UND3 FARSBP1-201ENST00000435808 1778 ntBASIC1.96□□□□□ -2.1
NPIPA1Q9UND3 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC1.96□□□□□ -2.1
NPIPA1Q9UND3 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
NPIPA1Q9UND3 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
NPIPA1Q9UND3 RNU6-529P-201ENST00000363383 104 ntBASIC1.96□□□□□ -2.1
NPIPA1Q9UND3 SNORA62.1-201ENST00000364287 154 ntBASIC1.96□□□□□ -2.1
NPIPA1Q9UND3 SNORA16B-201ENST00000364674 135 ntBASIC1.96□□□□□ -2.1
NPIPA1Q9UND3 RNU6-387P-201ENST00000411331 105 ntBASIC1.96□□□□□ -2.1
NPIPA1Q9UND3 BX295541.1-201ENST00000417774 250 ntBASIC1.96□□□□□ -2.1
NPIPA1Q9UND3 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC1.96□□□□□ -2.1
NPIPA1Q9UND3 AL365400.1-201ENST00000431854 640 ntBASIC1.96□□□□□ -2.1
NPIPA1Q9UND3 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC1.96□□□□□ -2.1
NPIPA1Q9UND3 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC1.96□□□□□ -2.1
NPIPA1Q9UND3 MTND3P25-201ENST00000509243 135 ntBASIC1.96□□□□□ -2.1
NPIPA1Q9UND3 RNA5SP200-201ENST00000516360 103 ntBASIC1.96□□□□□ -2.1
NPIPA1Q9UND3 SNORA18.6-201ENST00000516792 115 ntBASIC1.96□□□□□ -2.1
NPIPA1Q9UND3 RNU6-410P-201ENST00000517006 107 ntBASIC1.96□□□□□ -2.1
NPIPA1Q9UND3 RNU6-685P-201ENST00000517088 95 ntBASIC1.96□□□□□ -2.1
NPIPA1Q9UND3 BNIP3P6-201ENST00000549284 499 ntBASIC1.96□□□□□ -2.1
NPIPA1Q9UND3 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC1.96□□□□□ -2.1
NPIPA1Q9UND3 AC093249.1-201ENST00000567049 203 ntBASIC1.96□□□□□ -2.1
NPIPA1Q9UND3 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC1.96□□□□□ -2.1
NPIPA1Q9UND3 SEPT7P9-203ENST00000604116 343 ntBASIC1.96□□□□□ -2.1
NPIPA1Q9UND3 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC1.96□□□□□ -2.1
NPIPA1Q9UND3 AC138649.3-201ENST00000622154 254 ntBASIC1.96□□□□□ -2.1
NPIPA1Q9UND3 AP000770.2-201ENST00000623694 100 ntBASIC1.96□□□□□ -2.1
NPIPA1Q9UND3 AC090517.3-201ENST00000625170 141 ntBASIC1.96□□□□□ -2.1
NPIPA1Q9UND3 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
NPIPA1Q9UND3 OR4G2P-201ENST00000328113 903 ntBASIC1.95□□□□□ -2.1
NPIPA1Q9UND3 RNU6-1010P-201ENST00000362757 107 ntBASIC1.95□□□□□ -2.1
NPIPA1Q9UND3 SNORD56.1-201ENST00000362913 68 ntBASIC1.95□□□□□ -2.1
NPIPA1Q9UND3 RNU6-1287P-201ENST00000362914 107 ntBASIC1.95□□□□□ -2.1
NPIPA1Q9UND3 RNU1-23P-201ENST00000363361 144 ntBASIC1.95□□□□□ -2.1
NPIPA1Q9UND3 Y_RNA.367-201ENST00000365544 101 ntBASIC1.95□□□□□ -2.1
NPIPA1Q9UND3 RNU6-297P-201ENST00000384636 107 ntBASIC1.95□□□□□ -2.1
NPIPA1Q9UND3 RNU6-1060P-201ENST00000384664 107 ntBASIC1.95□□□□□ -2.1
NPIPA1Q9UND3 MIR561-201ENST00000385216 97 ntBASIC1.95□□□□□ -2.1
NPIPA1Q9UND3 RNU2-40P-201ENST00000410833 196 ntBASIC1.95□□□□□ -2.1
NPIPA1Q9UND3 AL356379.1-201ENST00000414105 126 ntBASIC1.95□□□□□ -2.1
NPIPA1Q9UND3 OR6C66P-201ENST00000414917 930 ntBASIC1.95□□□□□ -2.1
NPIPA1Q9UND3 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC1.95□□□□□ -2.1
NPIPA1Q9UND3 EDDM3CP-201ENST00000415977 425 ntBASIC1.95□□□□□ -2.1
NPIPA1Q9UND3 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC1.95□□□□□ -2.1
NPIPA1Q9UND3 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC1.95□□□□□ -2.1
NPIPA1Q9UND3 MTCYBP5-201ENST00000423752 1135 ntBASIC1.95□□□□□ -2.1
NPIPA1Q9UND3 GPR143P-201ENST00000434155 205 ntBASIC1.95□□□□□ -2.1
NPIPA1Q9UND3 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC1.95□□□□□ -2.1
NPIPA1Q9UND3 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC1.95□□□□□ -2.1
NPIPA1Q9UND3 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC1.95□□□□□ -2.1
NPIPA1Q9UND3 Y_RNA.638-201ENST00000459374 113 ntBASIC1.95□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms