Protein–RNA interactions for Protein: Q9ULD4

BRPF3, Bromodomain and PHD finger-containing protein 3, humanhuman

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3Q9ULD4 Y_RNA.405-201ENST00000383979 100 ntBASIC4.69□□□□□ -1.66
BRPF3Q9ULD4 Y_RNA.451-201ENST00000384200 100 ntBASIC4.69□□□□□ -1.66
BRPF3Q9ULD4 Y_RNA.483-201ENST00000384380 101 ntBASIC4.69□□□□□ -1.66
BRPF3Q9ULD4 RNU1-13P-201ENST00000384499 162 ntBASIC4.69□□□□□ -1.66
BRPF3Q9ULD4 Y_RNA.524-201ENST00000384564 100 ntBASIC4.69□□□□□ -1.66
BRPF3Q9ULD4 Y_RNA.561-201ENST00000384694 100 ntBASIC4.69□□□□□ -1.66
BRPF3Q9ULD4 BTF3L4P2-201ENST00000392798 346 ntBASIC4.69□□□□□ -1.66
BRPF3Q9ULD4 RPS26P8-201ENST00000393490 348 ntBASIC4.69□□□□□ -1.66
BRPF3Q9ULD4 AC124916.1-201ENST00000444020 547 ntBASIC4.69□□□□□ -1.66
BRPF3Q9ULD4 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC4.69□□□□□ -1.66
BRPF3Q9ULD4 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC4.69□□□□□ -1.66
BRPF3Q9ULD4 SNORD127-201ENST00000458892 86 ntBASIC4.69□□□□□ -1.66
BRPF3Q9ULD4 AC084357.1-201ENST00000473404 255 ntBASIC4.69□□□□□ -1.66
BRPF3Q9ULD4 AL132838.2-201ENST00000492041 314 ntBASIC4.69□□□□□ -1.66
BRPF3Q9ULD4 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC4.69□□□□□ -1.66
BRPF3Q9ULD4 AC074250.1-201ENST00000511117 192 ntBASIC4.69□□□□□ -1.66
BRPF3Q9ULD4 SNORA43.2-201ENST00000516652 128 ntBASIC4.69□□□□□ -1.66
BRPF3Q9ULD4 SNORD59.2-201ENST00000516873 68 ntBASIC4.69□□□□□ -1.66
BRPF3Q9ULD4 AC091144.1-201ENST00000519573 138 ntBASIC4.69□□□□□ -1.66
BRPF3Q9ULD4 AP004607.1-201ENST00000524456 203 ntBASIC4.69□□□□□ -1.66
BRPF3Q9ULD4 AC007458.1-201ENST00000542812 373 ntBASIC4.69□□□□□ -1.66
BRPF3Q9ULD4 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC4.69□□□□□ -1.66
BRPF3Q9ULD4 AC104581.2-201ENST00000572227 430 ntBASIC4.69□□□□□ -1.66
BRPF3Q9ULD4 BRDTP1-201ENST00000605735 677 ntBASIC4.69□□□□□ -1.66
BRPF3Q9ULD4 AC068831.7-201ENST00000616954 363 ntBASIC4.69□□□□□ -1.66
BRPF3Q9ULD4 AC002076.2-201ENST00000617362 122 ntBASIC4.69□□□□□ -1.66
BRPF3Q9ULD4 AC006111.3-201ENST00000622137 383 ntBASIC4.69□□□□□ -1.66
BRPF3Q9ULD4 RNA5SP196-201ENST00000625967 102 ntBASIC4.69□□□□□ -1.66
BRPF3Q9ULD4 AC243829.7-201ENST00000633081 225 ntBASIC4.69□□□□□ -1.66
BRPF3Q9ULD4 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
BRPF3Q9ULD4 U6.104-201ENST00000637979 90 ntBASIC4.69□□□□□ -1.66
BRPF3Q9ULD4 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
BRPF3Q9ULD4 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
BRPF3Q9ULD4 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
BRPF3Q9ULD4 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC4.69□□□□□ -1.66
BRPF3Q9ULD4 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
BRPF3Q9ULD4 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.69□□□□□ -1.66
BRPF3Q9ULD4 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC4.68□□□□□ -1.66
BRPF3Q9ULD4 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
BRPF3Q9ULD4 Z75746.1-201ENST00000440243 2080 ntBASIC4.68□□□□□ -1.66
BRPF3Q9ULD4 RNU1-76P-201ENST00000362903 159 ntBASIC4.68□□□□□ -1.66
BRPF3Q9ULD4 RNU6-778P-201ENST00000363269 103 ntBASIC4.68□□□□□ -1.66
BRPF3Q9ULD4 RNU6-527P-201ENST00000363425 104 ntBASIC4.68□□□□□ -1.66
BRPF3Q9ULD4 Y_RNA.350-201ENST00000365409 98 ntBASIC4.68□□□□□ -1.66
BRPF3Q9ULD4 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC4.68□□□□□ -1.66
BRPF3Q9ULD4 RFX3-203ENST00000381984 364 ntTSL 3 BASIC4.68□□□□□ -1.66
BRPF3Q9ULD4 RNU6ATAC23P-201ENST00000408448 123 ntBASIC4.68□□□□□ -1.66
BRPF3Q9ULD4 RNU6-1077P-201ENST00000410506 102 ntBASIC4.68□□□□□ -1.66
BRPF3Q9ULD4 AP000275.1-201ENST00000411943 390 ntBASIC4.68□□□□□ -1.66
BRPF3Q9ULD4 AC009310.1-201ENST00000414414 451 ntBASIC4.68□□□□□ -1.66
BRPF3Q9ULD4 TPT1P12-201ENST00000448968 492 ntBASIC4.68□□□□□ -1.66
BRPF3Q9ULD4 AC006026.2-201ENST00000457376 180 ntBASIC4.68□□□□□ -1.66
BRPF3Q9ULD4 RPL23AP14-201ENST00000468281 468 ntBASIC4.68□□□□□ -1.66
BRPF3Q9ULD4 AC034236.1-201ENST00000469891 373 ntBASIC4.68□□□□□ -1.66
BRPF3Q9ULD4 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC4.68□□□□□ -1.66
BRPF3Q9ULD4 RPL23AP49-201ENST00000492925 468 ntBASIC4.68□□□□□ -1.66
BRPF3Q9ULD4 AC107222.1-201ENST00000510899 637 ntBASIC4.68□□□□□ -1.66
BRPF3Q9ULD4 YPEL5P3-201ENST00000547227 352 ntBASIC4.68□□□□□ -1.66
BRPF3Q9ULD4 AC024153.1-201ENST00000603103 365 ntBASIC4.68□□□□□ -1.66
BRPF3Q9ULD4 RNVU1-4-201ENST00000612985 164 ntBASIC4.68□□□□□ -1.66
BRPF3Q9ULD4 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
BRPF3Q9ULD4 IPO8P1-201ENST00000455509 3109 ntBASIC4.68□□□□□ -1.66
BRPF3Q9ULD4 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
BRPF3Q9ULD4 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC4.68□□□□□ -1.66
BRPF3Q9ULD4 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC4.68□□□□□ -1.66
BRPF3Q9ULD4 UBE3AP2-201ENST00000429033 2259 ntBASIC4.67□□□□□ -1.66
BRPF3Q9ULD4 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.67□□□□□ -1.66
BRPF3Q9ULD4 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC4.67□□□□□ -1.66
BRPF3Q9ULD4 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
BRPF3Q9ULD4 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC4.67□□□□□ -1.66
BRPF3Q9ULD4 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.67□□□□□ -1.66
BRPF3Q9ULD4 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
BRPF3Q9ULD4 SNORA70.2-201ENST00000364506 135 ntBASIC4.67□□□□□ -1.66
BRPF3Q9ULD4 Y_RNA.358-201ENST00000365491 99 ntBASIC4.67□□□□□ -1.66
BRPF3Q9ULD4 RNU6-898P-201ENST00000365627 104 ntBASIC4.67□□□□□ -1.66
BRPF3Q9ULD4 RNU6-611P-201ENST00000384276 104 ntBASIC4.67□□□□□ -1.66
BRPF3Q9ULD4 MIR518D-201ENST00000385014 87 ntBASIC4.67□□□□□ -1.66
BRPF3Q9ULD4 HMGN2P30-201ENST00000423237 256 ntBASIC4.67□□□□□ -1.66
BRPF3Q9ULD4 AC098831.1-201ENST00000440661 216 ntBASIC4.67□□□□□ -1.66
BRPF3Q9ULD4 RPEP5-201ENST00000441137 268 ntBASIC4.67□□□□□ -1.66
BRPF3Q9ULD4 NUTF2P7-201ENST00000453086 375 ntBASIC4.67□□□□□ -1.66
BRPF3Q9ULD4 RN7SL860P-201ENST00000473738 223 ntBASIC4.67□□□□□ -1.66
BRPF3Q9ULD4 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC4.67□□□□□ -1.66
BRPF3Q9ULD4 RNU7-175P-201ENST00000515915 61 ntBASIC4.67□□□□□ -1.66
BRPF3Q9ULD4 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC4.67□□□□□ -1.66
BRPF3Q9ULD4 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.67□□□□□ -1.66
BRPF3Q9ULD4 AC060766.3-201ENST00000591442 263 ntBASIC4.67□□□□□ -1.66
BRPF3Q9ULD4 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC4.67□□□□□ -1.66
BRPF3Q9ULD4 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
BRPF3Q9ULD4 AC112484.5-201ENST00000624189 228 ntBASIC4.67□□□□□ -1.66
BRPF3Q9ULD4 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
BRPF3Q9ULD4 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
BRPF3Q9ULD4 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
BRPF3Q9ULD4 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
BRPF3Q9ULD4 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
BRPF3Q9ULD4 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
BRPF3Q9ULD4 AL079305.1-201ENST00000623159 3008 ntBASIC4.67□□□□□ -1.66
BRPF3Q9ULD4 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
BRPF3Q9ULD4 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
BRPF3Q9ULD4 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 119.2 ms