Protein–RNA interactions for Protein: Q9NRR5

UBQLN4, Ubiquilin-4, humanhuman

Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4Q9NRR5 AC112220.3-201ENST00000605502 502 ntBASIC1.23□□□□□ -2.21
UBQLN4Q9NRR5 AC024940.5-201ENST00000622889 474 ntBASIC1.23□□□□□ -2.21
UBQLN4Q9NRR5 AL138960.2-201ENST00000625145 535 ntBASIC1.23□□□□□ -2.21
UBQLN4Q9NRR5 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
UBQLN4Q9NRR5 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.22□□□□□ -2.21
UBQLN4Q9NRR5 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
UBQLN4Q9NRR5 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
UBQLN4Q9NRR5 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC1.22□□□□□ -2.21
UBQLN4Q9NRR5 SNORA75B-201ENST00000384053 137 ntBASIC1.22□□□□□ -2.21
UBQLN4Q9NRR5 RNU6-439P-201ENST00000384188 106 ntBASIC1.22□□□□□ -2.21
UBQLN4Q9NRR5 SNORD116-20-201ENST00000384529 92 ntBASIC1.22□□□□□ -2.21
UBQLN4Q9NRR5 RNU6-1000P-201ENST00000391066 106 ntBASIC1.22□□□□□ -2.21
UBQLN4Q9NRR5 RNU2-62P-201ENST00000410868 191 ntBASIC1.22□□□□□ -2.21
UBQLN4Q9NRR5 AC019070.1-201ENST00000415008 1024 ntBASIC1.22□□□□□ -2.21
UBQLN4Q9NRR5 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.22□□□□□ -2.21
UBQLN4Q9NRR5 AC108667.1-201ENST00000428618 249 ntBASIC1.22□□□□□ -2.21
UBQLN4Q9NRR5 AC118469.1-201ENST00000442943 488 ntBASIC1.22□□□□□ -2.21
UBQLN4Q9NRR5 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.22□□□□□ -2.21
UBQLN4Q9NRR5 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.22□□□□□ -2.21
UBQLN4Q9NRR5 AC003071.1-201ENST00000451219 789 ntBASIC1.22□□□□□ -2.21
UBQLN4Q9NRR5 RPL23AP35-201ENST00000451906 501 ntBASIC1.22□□□□□ -2.21
UBQLN4Q9NRR5 MTCYBP18-201ENST00000501056 747 ntBASIC1.22□□□□□ -2.21
UBQLN4Q9NRR5 MTCYBP35-201ENST00000503630 1137 ntBASIC1.22□□□□□ -2.21
UBQLN4Q9NRR5 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC1.22□□□□□ -2.21
UBQLN4Q9NRR5 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC1.22□□□□□ -2.21
UBQLN4Q9NRR5 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC1.22□□□□□ -2.21
UBQLN4Q9NRR5 AC023050.2-201ENST00000544968 387 ntBASIC1.22□□□□□ -2.21
UBQLN4Q9NRR5 AC008269.2-201ENST00000561915 1105 ntBASIC1.22□□□□□ -2.21
UBQLN4Q9NRR5 MIR4421-201ENST00000578133 69 ntBASIC1.22□□□□□ -2.21
UBQLN4Q9NRR5 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC1.22□□□□□ -2.21
UBQLN4Q9NRR5 BCRP9-201ENST00000605312 388 ntBASIC1.22□□□□□ -2.21
UBQLN4Q9NRR5 AL355816.2-201ENST00000610049 647 ntBASIC1.22□□□□□ -2.21
UBQLN4Q9NRR5 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.22□□□□□ -2.21
UBQLN4Q9NRR5 AC093648.1-201ENST00000623546 606 ntBASIC1.22□□□□□ -2.21
UBQLN4Q9NRR5 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC1.22□□□□□ -2.21
UBQLN4Q9NRR5 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
UBQLN4Q9NRR5 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
UBQLN4Q9NRR5 RNU6-1210P-201ENST00000363775 107 ntBASIC1.21□□□□□ -2.22
UBQLN4Q9NRR5 RNU6-946P-201ENST00000383878 107 ntBASIC1.21□□□□□ -2.22
UBQLN4Q9NRR5 Y_RNA.623-201ENST00000411128 95 ntBASIC1.21□□□□□ -2.22
UBQLN4Q9NRR5 SRIP3-201ENST00000413200 219 ntBASIC1.21□□□□□ -2.22
UBQLN4Q9NRR5 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC1.21□□□□□ -2.22
UBQLN4Q9NRR5 TRIM60P10Y-201ENST00000425589 751 ntBASIC1.21□□□□□ -2.22
UBQLN4Q9NRR5 SDAD1P3-201ENST00000427380 333 ntBASIC1.21□□□□□ -2.22
UBQLN4Q9NRR5 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC1.21□□□□□ -2.22
UBQLN4Q9NRR5 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC1.21□□□□□ -2.22
UBQLN4Q9NRR5 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC1.21□□□□□ -2.22
UBQLN4Q9NRR5 AC009474.2-201ENST00000451383 136 ntBASIC1.21□□□□□ -2.22
UBQLN4Q9NRR5 RNU1-123P-201ENST00000458950 160 ntBASIC1.21□□□□□ -2.22
UBQLN4Q9NRR5 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC1.21□□□□□ -2.22
UBQLN4Q9NRR5 RNU6-991P-201ENST00000516168 107 ntBASIC1.21□□□□□ -2.22
UBQLN4Q9NRR5 AC068587.4-201ENST00000533893 186 ntBASIC1.21□□□□□ -2.22
UBQLN4Q9NRR5 DNAJC19P9-201ENST00000555084 351 ntBASIC1.21□□□□□ -2.22
UBQLN4Q9NRR5 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.21□□□□□ -2.22
UBQLN4Q9NRR5 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.21□□□□□ -2.22
UBQLN4Q9NRR5 MIR3146-201ENST00000580367 79 ntBASIC1.21□□□□□ -2.22
UBQLN4Q9NRR5 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC1.21□□□□□ -2.22
UBQLN4Q9NRR5 AC078795.2-201ENST00000602835 1252 ntBASIC1.21□□□□□ -2.22
UBQLN4Q9NRR5 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.21□□□□□ -2.22
UBQLN4Q9NRR5 AC063943.3-201ENST00000615562 356 ntBASIC1.21□□□□□ -2.22
UBQLN4Q9NRR5 AC006338.1-201ENST00000618453 749 ntBASIC1.21□□□□□ -2.22
UBQLN4Q9NRR5 AL161722.3-201ENST00000605789 2983 ntBASIC1.21□□□□□ -2.22
UBQLN4Q9NRR5 FARSBP1-201ENST00000435808 1778 ntBASIC1.21□□□□□ -2.22
UBQLN4Q9NRR5 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
UBQLN4Q9NRR5 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
UBQLN4Q9NRR5 Y_RNA.40-201ENST00000362645 93 ntBASIC1.2□□□□□ -2.22
UBQLN4Q9NRR5 SNORD3E-201ENST00000362899 217 ntBASIC1.2□□□□□ -2.22
UBQLN4Q9NRR5 RNU6-338P-201ENST00000383888 105 ntBASIC1.2□□□□□ -2.22
UBQLN4Q9NRR5 RNU6-1257P-201ENST00000384625 110 ntBASIC1.2□□□□□ -2.22
UBQLN4Q9NRR5 MIR10A-201ENST00000385043 110 ntBASIC1.2□□□□□ -2.22
UBQLN4Q9NRR5 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.2□□□□□ -2.22
UBQLN4Q9NRR5 MTATP6P20-201ENST00000414147 562 ntBASIC1.2□□□□□ -2.22
UBQLN4Q9NRR5 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.2□□□□□ -2.22
UBQLN4Q9NRR5 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.2□□□□□ -2.22
UBQLN4Q9NRR5 MTND3P1-201ENST00000441336 220 ntBASIC1.2□□□□□ -2.22
UBQLN4Q9NRR5 AL358794.1-201ENST00000445689 381 ntBASIC1.2□□□□□ -2.22
UBQLN4Q9NRR5 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC1.2□□□□□ -2.22
UBQLN4Q9NRR5 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.2□□□□□ -2.22
UBQLN4Q9NRR5 RPS29P23-201ENST00000458635 123 ntBASIC1.2□□□□□ -2.22
UBQLN4Q9NRR5 RNU7-95P-201ENST00000459222 64 ntBASIC1.2□□□□□ -2.22
UBQLN4Q9NRR5 AC005908.1-201ENST00000468701 347 ntBASIC1.2□□□□□ -2.22
UBQLN4Q9NRR5 AC119751.4-201ENST00000507498 357 ntBASIC1.2□□□□□ -2.22
UBQLN4Q9NRR5 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.2□□□□□ -2.22
UBQLN4Q9NRR5 RNU6-1092P-201ENST00000516955 87 ntBASIC1.2□□□□□ -2.22
UBQLN4Q9NRR5 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC1.2□□□□□ -2.22
UBQLN4Q9NRR5 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC1.2□□□□□ -2.22
UBQLN4Q9NRR5 AP003033.1-201ENST00000527244 415 ntBASIC1.2□□□□□ -2.22
UBQLN4Q9NRR5 AL158042.1-201ENST00000605338 460 ntBASIC1.2□□□□□ -2.22
UBQLN4Q9NRR5 AL158032.1-201ENST00000605401 106 ntBASIC1.2□□□□□ -2.22
UBQLN4Q9NRR5 AC080013.3-201ENST00000606839 578 ntBASIC1.2□□□□□ -2.22
UBQLN4Q9NRR5 AC021755.4-201ENST00000616620 456 ntBASIC1.2□□□□□ -2.22
UBQLN4Q9NRR5 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.2□□□□□ -2.22
UBQLN4Q9NRR5 AL138955.1-201ENST00000622881 1040 ntBASIC1.2□□□□□ -2.22
UBQLN4Q9NRR5 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
UBQLN4Q9NRR5 RNU6-942P-201ENST00000363002 107 ntBASIC1.19□□□□□ -2.22
UBQLN4Q9NRR5 RNU6-23P-201ENST00000363283 107 ntBASIC1.19□□□□□ -2.22
UBQLN4Q9NRR5 SNORA7.1-201ENST00000363750 139 ntBASIC1.19□□□□□ -2.22
UBQLN4Q9NRR5 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC1.19□□□□□ -2.22
UBQLN4Q9NRR5 RNU6-72P-201ENST00000384285 79 ntBASIC1.19□□□□□ -2.22
UBQLN4Q9NRR5 MIR150-201ENST00000385048 84 ntBASIC1.19□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms