Protein–RNA interactions for Protein: Q9NRQ5

SMCO4, Single-pass membrane and coiled-coil domain-containing protein 4, humanhuman

Predictions only

Length 59 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4Q9NRQ5 AC012557.2-201ENST00000605919 418 ntBASIC-0.29□□□□□ -2.46
SMCO4Q9NRQ5 MIR6504-201ENST00000613520 61 ntBASIC-0.29□□□□□ -2.46
SMCO4Q9NRQ5 AC073349.3-201ENST00000617616 186 ntBASIC-0.29□□□□□ -2.46
SMCO4Q9NRQ5 U2.21-201ENST00000637295 81 ntBASIC-0.29□□□□□ -2.46
SMCO4Q9NRQ5 RNU6-778P-201ENST00000363269 103 ntBASIC-0.3□□□□□ -2.46
SMCO4Q9NRQ5 RNU6-546P-201ENST00000383991 107 ntBASIC-0.3□□□□□ -2.46
SMCO4Q9NRQ5 ATP5F1P6-201ENST00000402768 767 ntBASIC-0.3□□□□□ -2.46
SMCO4Q9NRQ5 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC-0.3□□□□□ -2.46
SMCO4Q9NRQ5 RPL26P27-201ENST00000414397 437 ntBASIC-0.3□□□□□ -2.46
SMCO4Q9NRQ5 RPL31P35-201ENST00000431058 377 ntBASIC-0.3□□□□□ -2.46
SMCO4Q9NRQ5 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC-0.3□□□□□ -2.46
SMCO4Q9NRQ5 AL606662.1-201ENST00000445763 553 ntBASIC-0.3□□□□□ -2.46
SMCO4Q9NRQ5 AL096829.2-201ENST00000446582 742 ntBASIC-0.3□□□□□ -2.46
SMCO4Q9NRQ5 AC093767.1-201ENST00000504523 156 ntBASIC-0.3□□□□□ -2.46
SMCO4Q9NRQ5 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC-0.3□□□□□ -2.46
SMCO4Q9NRQ5 EIF1P4-201ENST00000572664 335 ntBASIC-0.3□□□□□ -2.46
SMCO4Q9NRQ5 AC005951.2-201ENST00000576282 495 ntBASIC-0.3□□□□□ -2.46
SMCO4Q9NRQ5 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC-0.3□□□□□ -2.46
SMCO4Q9NRQ5 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC-0.3□□□□□ -2.46
SMCO4Q9NRQ5 ANKRD30BP1-201ENST00000451052 2186 ntBASIC-0.3□□□□□ -2.46
SMCO4Q9NRQ5 RNA5SP493-201ENST00000364115 91 ntBASIC-0.31□□□□□ -2.46
SMCO4Q9NRQ5 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC-0.31□□□□□ -2.46
SMCO4Q9NRQ5 RNU2-47P-201ENST00000410649 186 ntBASIC-0.31□□□□□ -2.46
SMCO4Q9NRQ5 AL359704.1-201ENST00000411586 781 ntBASIC-0.31□□□□□ -2.46
SMCO4Q9NRQ5 AC118282.2-201ENST00000508739 374 ntBASIC-0.31□□□□□ -2.46
SMCO4Q9NRQ5 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC-0.31□□□□□ -2.46
SMCO4Q9NRQ5 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC-0.31□□□□□ -2.46
SMCO4Q9NRQ5 AL121821.2-201ENST00000556081 394 ntBASIC-0.31□□□□□ -2.46
SMCO4Q9NRQ5 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC-0.31□□□□□ -2.46
SMCO4Q9NRQ5 PCMTD1P7-201ENST00000634506 357 ntBASIC-0.31□□□□□ -2.46
SMCO4Q9NRQ5 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC-0.32□□□□□ -2.46
SMCO4Q9NRQ5 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC-0.32□□□□□ -2.46
SMCO4Q9NRQ5 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC-0.32□□□□□ -2.46
SMCO4Q9NRQ5 RNA5SP264-201ENST00000363115 107 ntBASIC-0.32□□□□□ -2.46
SMCO4Q9NRQ5 SNRPEP9-201ENST00000436794 238 ntBASIC-0.32□□□□□ -2.46
SMCO4Q9NRQ5 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC-0.32□□□□□ -2.46
SMCO4Q9NRQ5 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC-0.32□□□□□ -2.46
SMCO4Q9NRQ5 AL360219.1-201ENST00000610230 366 ntBASIC-0.32□□□□□ -2.46
SMCO4Q9NRQ5 AC004908.3-201ENST00000610248 625 ntBASIC-0.32□□□□□ -2.46
SMCO4Q9NRQ5 AC093648.1-201ENST00000623546 606 ntBASIC-0.32□□□□□ -2.46
SMCO4Q9NRQ5 SNORD114-23-201ENST00000363536 72 ntBASIC-0.33□□□□□ -2.46
SMCO4Q9NRQ5 SNORA32.1-201ENST00000364514 115 ntBASIC-0.33□□□□□ -2.46
SMCO4Q9NRQ5 RNU6-969P-201ENST00000383900 105 ntBASIC-0.33□□□□□ -2.46
SMCO4Q9NRQ5 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC-0.33□□□□□ -2.46
SMCO4Q9NRQ5 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC-0.33□□□□□ -2.46
SMCO4Q9NRQ5 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC-0.33□□□□□ -2.46
SMCO4Q9NRQ5 WDR78-207ENST00000488333 613 ntTSL 3 BASIC-0.33□□□□□ -2.46
SMCO4Q9NRQ5 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC-0.33□□□□□ -2.46
SMCO4Q9NRQ5 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC-0.33□□□□□ -2.46
SMCO4Q9NRQ5 RNU4-77P-201ENST00000516692 156 ntBASIC-0.33□□□□□ -2.46
SMCO4Q9NRQ5 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC-0.33□□□□□ -2.46
SMCO4Q9NRQ5 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC-0.33□□□□□ -2.46
SMCO4Q9NRQ5 AC126177.8-201ENST00000618339 1015 ntBASIC-0.33□□□□□ -2.46
SMCO4Q9NRQ5 AC080188.3-201ENST00000624842 748 ntBASIC-0.33□□□□□ -2.46
SMCO4Q9NRQ5 UGP2-230ENST00000626380 276 ntTSL 5 BASIC-0.33□□□□□ -2.46
SMCO4Q9NRQ5 ANKRD36BP1-202ENST00000604892 1417 ntBASIC-0.33□□□□□ -2.46
SMCO4Q9NRQ5 MIR194-1-201ENST00000384892 85 ntBASIC-0.34□□□□□ -2.46
SMCO4Q9NRQ5 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC-0.34□□□□□ -2.46
SMCO4Q9NRQ5 DAP3P1-201ENST00000441522 278 ntBASIC-0.34□□□□□ -2.46
SMCO4Q9NRQ5 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC-0.34□□□□□ -2.46
SMCO4Q9NRQ5 AC011005.2-201ENST00000487324 359 ntBASIC-0.34□□□□□ -2.46
SMCO4Q9NRQ5 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC-0.34□□□□□ -2.46
SMCO4Q9NRQ5 RNA5SP227-201ENST00000516184 113 ntBASIC-0.34□□□□□ -2.46
SMCO4Q9NRQ5 AP003066.2-201ENST00000529375 555 ntBASIC-0.34□□□□□ -2.46
SMCO4Q9NRQ5 NTS-203ENST00000551529 801 ntTSL 3 BASIC-0.34□□□□□ -2.46
SMCO4Q9NRQ5 MIR4290-201ENST00000583807 95 ntBASIC-0.34□□□□□ -2.46
SMCO4Q9NRQ5 SNORA4-201ENST00000584302 138 ntBASIC-0.34□□□□□ -2.46
SMCO4Q9NRQ5 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC-0.34□□□□□ -2.46
SMCO4Q9NRQ5 AC107075.1-201ENST00000613695 314 ntBASIC-0.34□□□□□ -2.46
SMCO4Q9NRQ5 AC004808.1-201ENST00000627671 721 ntBASIC-0.34□□□□□ -2.46
SMCO4Q9NRQ5 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC-0.35□□□□□ -2.47
SMCO4Q9NRQ5 RNU6-160P-201ENST00000384591 107 ntBASIC-0.35□□□□□ -2.47
SMCO4Q9NRQ5 RPL22P22-201ENST00000395439 379 ntBASIC-0.35□□□□□ -2.47
SMCO4Q9NRQ5 RAB28P5-201ENST00000427490 651 ntBASIC-0.35□□□□□ -2.47
SMCO4Q9NRQ5 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC-0.35□□□□□ -2.47
SMCO4Q9NRQ5 AC245047.7-201ENST00000440265 293 ntBASIC-0.35□□□□□ -2.47
SMCO4Q9NRQ5 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC-0.35□□□□□ -2.47
SMCO4Q9NRQ5 OR6C7P-201ENST00000547875 934 ntBASIC-0.35□□□□□ -2.47
SMCO4Q9NRQ5 HMGB1P33-201ENST00000563485 527 ntBASIC-0.35□□□□□ -2.47
SMCO4Q9NRQ5 MIR5094-201ENST00000578766 85 ntBASIC-0.35□□□□□ -2.47
SMCO4Q9NRQ5 AC123767.1-202ENST00000620407 817 ntBASIC-0.35□□□□□ -2.47
SMCO4Q9NRQ5 AC130454.1-201ENST00000622948 401 ntBASIC-0.35□□□□□ -2.47
SMCO4Q9NRQ5 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC-0.35□□□□□ -2.47
SMCO4Q9NRQ5 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC-0.35□□□□□ -2.47
SMCO4Q9NRQ5 MIR520A-201ENST00000384862 85 ntBASIC-0.36□□□□□ -2.47
SMCO4Q9NRQ5 SNORD99-201ENST00000408612 74 ntBASIC-0.36□□□□□ -2.47
SMCO4Q9NRQ5 AC010385.1-201ENST00000412374 256 ntBASIC-0.36□□□□□ -2.47
SMCO4Q9NRQ5 AL022400.1-201ENST00000423946 935 ntBASIC-0.36□□□□□ -2.47
SMCO4Q9NRQ5 AC099677.2-201ENST00000436385 175 ntBASIC-0.36□□□□□ -2.47
SMCO4Q9NRQ5 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC-0.36□□□□□ -2.47
SMCO4Q9NRQ5 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC-0.36□□□□□ -2.47
SMCO4Q9NRQ5 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC-0.36□□□□□ -2.47
SMCO4Q9NRQ5 AC015724.1-201ENST00000478577 156 ntBASIC-0.36□□□□□ -2.47
SMCO4Q9NRQ5 RNU6-991P-201ENST00000516168 107 ntBASIC-0.36□□□□□ -2.47
SMCO4Q9NRQ5 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC-0.36□□□□□ -2.47
SMCO4Q9NRQ5 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC-0.36□□□□□ -2.47
SMCO4Q9NRQ5 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC-0.36□□□□□ -2.47
SMCO4Q9NRQ5 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC-0.36□□□□□ -2.47
SMCO4Q9NRQ5 AP002906.1-201ENST00000603405 233 ntBASIC-0.36□□□□□ -2.47
SMCO4Q9NRQ5 RNU6-950P-201ENST00000384651 107 ntBASIC-0.37□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms