Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC3.7□□□□□ -1.82
VTA1Q9NP79 SNORD19.2-201ENST00000516978 73 ntBASIC3.7□□□□□ -1.82
VTA1Q9NP79 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC3.7□□□□□ -1.82
VTA1Q9NP79 AP000867.2-201ENST00000532468 320 ntBASIC3.7□□□□□ -1.82
VTA1Q9NP79 CR383656.8-201ENST00000549046 145 ntBASIC3.7□□□□□ -1.82
VTA1Q9NP79 TRAV32-201ENST00000553993 340 ntBASIC3.7□□□□□ -1.82
VTA1Q9NP79 AC021739.1-201ENST00000559631 174 ntBASIC3.7□□□□□ -1.82
VTA1Q9NP79 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.7□□□□□ -1.82
VTA1Q9NP79 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.7□□□□□ -1.82
VTA1Q9NP79 AL451007.1-201ENST00000595491 289 ntBASIC3.7□□□□□ -1.82
VTA1Q9NP79 AC084781.2-201ENST00000615568 161 ntBASIC3.7□□□□□ -1.82
VTA1Q9NP79 AC090971.5-201ENST00000621102 293 ntBASIC3.7□□□□□ -1.82
VTA1Q9NP79 SCARNA15.3-201ENST00000626315 122 ntBASIC3.7□□□□□ -1.82
VTA1Q9NP79 SCARNA4.1-201ENST00000628597 123 ntBASIC3.7□□□□□ -1.82
VTA1Q9NP79 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
VTA1Q9NP79 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.7□□□□□ -1.82
VTA1Q9NP79 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.7□□□□□ -1.82
VTA1Q9NP79 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.69□□□□□ -1.82
VTA1Q9NP79 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC3.69□□□□□ -1.82
VTA1Q9NP79 KPNA2P1-201ENST00000458289 1591 ntBASIC3.69□□□□□ -1.82
VTA1Q9NP79 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.69□□□□□ -1.82
VTA1Q9NP79 HAUS6P2-201ENST00000433254 2404 ntBASIC3.69□□□□□ -1.82
VTA1Q9NP79 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
VTA1Q9NP79 MIR422A-201ENST00000362286 90 ntBASIC3.69□□□□□ -1.82
VTA1Q9NP79 RNU6-78P-201ENST00000362897 107 ntBASIC3.69□□□□□ -1.82
VTA1Q9NP79 RNU6-898P-201ENST00000365627 104 ntBASIC3.69□□□□□ -1.82
VTA1Q9NP79 MIR517A-201ENST00000385001 87 ntBASIC3.69□□□□□ -1.82
VTA1Q9NP79 EI24P2-201ENST00000397776 1076 ntBASIC3.69□□□□□ -1.82
VTA1Q9NP79 AC016831.2-201ENST00000417179 352 ntBASIC3.69□□□□□ -1.82
VTA1Q9NP79 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.69□□□□□ -1.82
VTA1Q9NP79 RPS4XP2-201ENST00000458402 793 ntBASIC3.69□□□□□ -1.82
VTA1Q9NP79 RNU7-187P-201ENST00000458985 68 ntBASIC3.69□□□□□ -1.82
VTA1Q9NP79 ACA59.1-201ENST00000515966 143 ntBASIC3.69□□□□□ -1.82
VTA1Q9NP79 AC107934.2-201ENST00000518653 310 ntBASIC3.69□□□□□ -1.82
VTA1Q9NP79 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.69□□□□□ -1.82
VTA1Q9NP79 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC3.69□□□□□ -1.82
VTA1Q9NP79 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC3.69□□□□□ -1.82
VTA1Q9NP79 UBE2Q2P8-201ENST00000560644 102 ntBASIC3.69□□□□□ -1.82
VTA1Q9NP79 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.69□□□□□ -1.82
VTA1Q9NP79 AP000654.2-201ENST00000605633 586 ntBASIC3.69□□□□□ -1.82
VTA1Q9NP79 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
VTA1Q9NP79 RNVU1-4-201ENST00000612985 164 ntBASIC3.69□□□□□ -1.82
VTA1Q9NP79 MTND4LP32-201ENST00000636111 270 ntBASIC3.69□□□□□ -1.82
VTA1Q9NP79 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
VTA1Q9NP79 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
VTA1Q9NP79 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.68□□□□□ -1.82
VTA1Q9NP79 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
VTA1Q9NP79 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
VTA1Q9NP79 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.68□□□□□ -1.82
VTA1Q9NP79 MTND4P23-201ENST00000447723 1363 ntBASIC3.68□□□□□ -1.82
VTA1Q9NP79 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
VTA1Q9NP79 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
VTA1Q9NP79 RPL9P7-201ENST00000330965 580 ntBASIC3.68□□□□□ -1.82
VTA1Q9NP79 RNU1-70P-201ENST00000362618 164 ntBASIC3.68□□□□□ -1.82
VTA1Q9NP79 RNU6-827P-201ENST00000365553 106 ntBASIC3.68□□□□□ -1.82
VTA1Q9NP79 RNU6-43P-201ENST00000384302 107 ntBASIC3.68□□□□□ -1.82
VTA1Q9NP79 U3.26-201ENST00000391236 204 ntBASIC3.68□□□□□ -1.82
VTA1Q9NP79 SNORA75.4-201ENST00000391278 119 ntBASIC3.68□□□□□ -1.82
VTA1Q9NP79 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC3.68□□□□□ -1.82
VTA1Q9NP79 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.68□□□□□ -1.82
VTA1Q9NP79 AL513043.1-201ENST00000439124 535 ntBASIC3.68□□□□□ -1.82
VTA1Q9NP79 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.68□□□□□ -1.82
VTA1Q9NP79 RPL9P9-202ENST00000466501 579 ntBASIC3.68□□□□□ -1.82
VTA1Q9NP79 AC018437.1-201ENST00000492214 406 ntBASIC3.68□□□□□ -1.82
VTA1Q9NP79 AK3P2-201ENST00000507976 429 ntBASIC3.68□□□□□ -1.82
VTA1Q9NP79 AC097473.1-201ENST00000508142 408 ntBASIC3.68□□□□□ -1.82
VTA1Q9NP79 MTCYBP40-201ENST00000509390 1135 ntBASIC3.68□□□□□ -1.82
VTA1Q9NP79 SNORA43.2-201ENST00000516652 128 ntBASIC3.68□□□□□ -1.82
VTA1Q9NP79 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC3.68□□□□□ -1.82
VTA1Q9NP79 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC3.68□□□□□ -1.82
VTA1Q9NP79 EIF4BP1-201ENST00000554881 351 ntBASIC3.68□□□□□ -1.82
VTA1Q9NP79 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.68□□□□□ -1.82
VTA1Q9NP79 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.68□□□□□ -1.82
VTA1Q9NP79 AL137843.1-201ENST00000605078 385 ntBASIC3.68□□□□□ -1.82
VTA1Q9NP79 AL353621.2-201ENST00000605340 133 ntBASIC3.68□□□□□ -1.82
VTA1Q9NP79 AL627309.6-201ENST00000606857 840 ntBASIC3.68□□□□□ -1.82
VTA1Q9NP79 AC005046.1-201ENST00000608515 625 ntBASIC3.68□□□□□ -1.82
VTA1Q9NP79 U6.98-201ENST00000637157 84 ntBASIC3.68□□□□□ -1.82
VTA1Q9NP79 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
VTA1Q9NP79 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
VTA1Q9NP79 ADAM3A-203ENST00000461344 2157 ntBASIC3.68□□□□□ -1.82
VTA1Q9NP79 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.67□□□□□ -1.82
VTA1Q9NP79 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.67□□□□□ -1.82
VTA1Q9NP79 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.67□□□□□ -1.82
VTA1Q9NP79 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
VTA1Q9NP79 DLEU2_6.3-201ENST00000340052 136 ntBASIC3.67□□□□□ -1.82
VTA1Q9NP79 RNU6-1280P-201ENST00000365211 107 ntBASIC3.67□□□□□ -1.82
VTA1Q9NP79 Y_RNA.419-201ENST00000384041 102 ntBASIC3.67□□□□□ -1.82
VTA1Q9NP79 RNU6-790P-201ENST00000384479 105 ntBASIC3.67□□□□□ -1.82
VTA1Q9NP79 MIR184-201ENST00000384962 84 ntBASIC3.67□□□□□ -1.82
VTA1Q9NP79 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
VTA1Q9NP79 AL138885.1-201ENST00000405921 675 ntBASIC3.67□□□□□ -1.82
VTA1Q9NP79 SNORA11.2-201ENST00000408318 127 ntBASIC3.67□□□□□ -1.82
VTA1Q9NP79 Y_RNA.594-201ENST00000410373 140 ntBASIC3.67□□□□□ -1.82
VTA1Q9NP79 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC3.67□□□□□ -1.82
VTA1Q9NP79 MTCO2P12-201ENST00000427426 682 ntBASIC3.67□□□□□ -1.82
VTA1Q9NP79 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.67□□□□□ -1.82
VTA1Q9NP79 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC3.67□□□□□ -1.82
VTA1Q9NP79 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.67□□□□□ -1.82
VTA1Q9NP79 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 116.6 ms