Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC4.06□□□□□ -1.76
SSU72Q9NP77 TEX41-205ENST00000431734 529 ntTSL 4 BASIC4.06□□□□□ -1.76
SSU72Q9NP77 MTCO1P5-201ENST00000433573 344 ntBASIC4.06□□□□□ -1.76
SSU72Q9NP77 Y_RNA.638-201ENST00000459374 113 ntBASIC4.06□□□□□ -1.76
SSU72Q9NP77 RN7SL98P-201ENST00000462271 300 ntBASIC4.06□□□□□ -1.76
SSU72Q9NP77 RPS29P26-201ENST00000477483 171 ntBASIC4.06□□□□□ -1.76
SSU72Q9NP77 AP001025.1-201ENST00000486139 332 ntBASIC4.06□□□□□ -1.76
SSU72Q9NP77 RPL29P14-201ENST00000495837 428 ntBASIC4.06□□□□□ -1.76
SSU72Q9NP77 RNY3P16-201ENST00000516338 101 ntBASIC4.06□□□□□ -1.76
SSU72Q9NP77 RNU6-58P-201ENST00000517143 103 ntBASIC4.06□□□□□ -1.76
SSU72Q9NP77 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC4.06□□□□□ -1.76
SSU72Q9NP77 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
SSU72Q9NP77 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC4.06□□□□□ -1.76
SSU72Q9NP77 RPL21P9-201ENST00000556149 474 ntBASIC4.06□□□□□ -1.76
SSU72Q9NP77 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
SSU72Q9NP77 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC4.06□□□□□ -1.76
SSU72Q9NP77 MIR5571-201ENST00000577998 113 ntBASIC4.06□□□□□ -1.76
SSU72Q9NP77 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC4.06□□□□□ -1.76
SSU72Q9NP77 MIR5695-201ENST00000579717 85 ntBASIC4.06□□□□□ -1.76
SSU72Q9NP77 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC4.06□□□□□ -1.76
SSU72Q9NP77 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.06□□□□□ -1.76
SSU72Q9NP77 AC008749.1-201ENST00000597650 306 ntBASIC4.06□□□□□ -1.76
SSU72Q9NP77 MIR6826-201ENST00000617808 98 ntBASIC4.06□□□□□ -1.76
SSU72Q9NP77 Clostridiales-1.2-201ENST00000636724 160 ntBASIC4.06□□□□□ -1.76
SSU72Q9NP77 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.06□□□□□ -1.76
SSU72Q9NP77 HSP90AA4P-202ENST00000506915 2228 ntBASIC4.06□□□□□ -1.76
SSU72Q9NP77 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4.06□□□□□ -1.76
SSU72Q9NP77 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
SSU72Q9NP77 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
SSU72Q9NP77 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4.06□□□□□ -1.76
SSU72Q9NP77 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
SSU72Q9NP77 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.05□□□□□ -1.76
SSU72Q9NP77 MIR410-201ENST00000362222 80 ntBASIC4.05□□□□□ -1.76
SSU72Q9NP77 RNA5SP197-201ENST00000363357 119 ntBASIC4.05□□□□□ -1.76
SSU72Q9NP77 Y_RNA.233-201ENST00000364407 101 ntBASIC4.05□□□□□ -1.76
SSU72Q9NP77 Y_RNA.240-201ENST00000364469 95 ntBASIC4.05□□□□□ -1.76
SSU72Q9NP77 Y_RNA.319-201ENST00000365138 92 ntBASIC4.05□□□□□ -1.76
SSU72Q9NP77 RNU1-100P-201ENST00000365255 165 ntBASIC4.05□□□□□ -1.76
SSU72Q9NP77 RNU6-804P-201ENST00000384286 107 ntBASIC4.05□□□□□ -1.76
SSU72Q9NP77 SNORD116-20-201ENST00000384529 92 ntBASIC4.05□□□□□ -1.76
SSU72Q9NP77 MIR708-201ENST00000390708 88 ntBASIC4.05□□□□□ -1.76
SSU72Q9NP77 RNU6-1197P-201ENST00000391183 107 ntBASIC4.05□□□□□ -1.76
SSU72Q9NP77 MTHFD2P2-201ENST00000407725 247 ntBASIC4.05□□□□□ -1.76
SSU72Q9NP77 Y_RNA.590-201ENST00000410140 107 ntBASIC4.05□□□□□ -1.76
SSU72Q9NP77 RNU6-394P-201ENST00000410735 107 ntBASIC4.05□□□□□ -1.76
SSU72Q9NP77 RPL19P1-201ENST00000411635 428 ntBASIC4.05□□□□□ -1.76
SSU72Q9NP77 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC4.05□□□□□ -1.76
SSU72Q9NP77 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC4.05□□□□□ -1.76
SSU72Q9NP77 AC011998.1-201ENST00000433403 117 ntBASIC4.05□□□□□ -1.76
SSU72Q9NP77 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC4.05□□□□□ -1.76
SSU72Q9NP77 AC006011.1-201ENST00000442758 349 ntBASIC4.05□□□□□ -1.76
SSU72Q9NP77 RPL23AP3-201ENST00000453844 468 ntBASIC4.05□□□□□ -1.76
SSU72Q9NP77 SNORD2.1-201ENST00000458762 69 ntBASIC4.05□□□□□ -1.76
SSU72Q9NP77 AL132838.2-201ENST00000492041 314 ntBASIC4.05□□□□□ -1.76
SSU72Q9NP77 AC097462.2-201ENST00000504623 481 ntBASIC4.05□□□□□ -1.76
SSU72Q9NP77 SNORA27.4-201ENST00000516650 95 ntBASIC4.05□□□□□ -1.76
SSU72Q9NP77 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC4.05□□□□□ -1.76
SSU72Q9NP77 MRPS18CP4-201ENST00000535821 231 ntBASIC4.05□□□□□ -1.76
SSU72Q9NP77 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
SSU72Q9NP77 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC4.05□□□□□ -1.76
SSU72Q9NP77 AC012468.1-201ENST00000604888 430 ntBASIC4.05□□□□□ -1.76
SSU72Q9NP77 AL357075.2-201ENST00000614906 189 ntBASIC4.05□□□□□ -1.76
SSU72Q9NP77 MIR6134-201ENST00000617606 109 ntBASIC4.05□□□□□ -1.76
SSU72Q9NP77 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.05□□□□□ -1.76
SSU72Q9NP77 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
SSU72Q9NP77 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC4.05□□□□□ -1.76
SSU72Q9NP77 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.05□□□□□ -1.76
SSU72Q9NP77 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC4.05□□□□□ -1.76
SSU72Q9NP77 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC4.04□□□□□ -1.76
SSU72Q9NP77 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
SSU72Q9NP77 AC015813.6-201ENST00000624409 5808 ntBASIC4.04□□□□□ -1.76
SSU72Q9NP77 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
SSU72Q9NP77 SNORD56.1-201ENST00000362913 68 ntBASIC4.04□□□□□ -1.76
SSU72Q9NP77 Y_RNA.136-201ENST00000363444 102 ntBASIC4.04□□□□□ -1.76
SSU72Q9NP77 U3.15-201ENST00000365398 212 ntBASIC4.04□□□□□ -1.76
SSU72Q9NP77 RNU1-73P-201ENST00000383971 164 ntBASIC4.04□□□□□ -1.76
SSU72Q9NP77 SNORA36A-201ENST00000384221 132 ntBASIC4.04□□□□□ -1.76
SSU72Q9NP77 RNU6-1289P-201ENST00000384431 106 ntBASIC4.04□□□□□ -1.76
SSU72Q9NP77 RNU6-21P-201ENST00000384710 107 ntBASIC4.04□□□□□ -1.76
SSU72Q9NP77 MIR493-201ENST00000385254 89 ntBASIC4.04□□□□□ -1.76
SSU72Q9NP77 RN7SKP229-201ENST00000410465 302 ntBASIC4.04□□□□□ -1.76
SSU72Q9NP77 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC4.04□□□□□ -1.76
SSU72Q9NP77 AC074117.2-201ENST00000417130 397 ntBASIC4.04□□□□□ -1.76
SSU72Q9NP77 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC4.04□□□□□ -1.76
SSU72Q9NP77 PHBP16-201ENST00000446318 950 ntBASIC4.04□□□□□ -1.76
SSU72Q9NP77 MRPS10P1-201ENST00000448483 130 ntBASIC4.04□□□□□ -1.76
SSU72Q9NP77 AC117440.1-201ENST00000474107 571 ntBASIC4.04□□□□□ -1.76
SSU72Q9NP77 RPS23P1-201ENST00000491662 432 ntBASIC4.04□□□□□ -1.76
SSU72Q9NP77 Y_RNA.662-201ENST00000516028 97 ntBASIC4.04□□□□□ -1.76
SSU72Q9NP77 RNU6-966P-201ENST00000516479 104 ntBASIC4.04□□□□□ -1.76
SSU72Q9NP77 RNA5SP519-201ENST00000516480 119 ntBASIC4.04□□□□□ -1.76
SSU72Q9NP77 IGLV2-28-201ENST00000520681 304 ntBASIC4.04□□□□□ -1.76
SSU72Q9NP77 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC4.04□□□□□ -1.76
SSU72Q9NP77 AC016256.1-201ENST00000547971 354 ntBASIC4.04□□□□□ -1.76
SSU72Q9NP77 CR383656.8-201ENST00000549046 145 ntBASIC4.04□□□□□ -1.76
SSU72Q9NP77 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC4.04□□□□□ -1.76
SSU72Q9NP77 AC055872.1-201ENST00000570978 278 ntBASIC4.04□□□□□ -1.76
SSU72Q9NP77 AC022655.2-201ENST00000577280 318 ntBASIC4.04□□□□□ -1.76
SSU72Q9NP77 AC024581.2-201ENST00000619986 252 ntBASIC4.04□□□□□ -1.76
SSU72Q9NP77 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms