Protein–RNA interactions for Protein: Q9HD42

CHMP1A, Charged multivesicular body protein 1a, humanhuman

Predicted RBP Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1AQ9HD42 Y_RNA.248-201ENST00000364501 109 ntBASIC2.54□□□□□ -2
CHMP1AQ9HD42 RNU6-220P-201ENST00000390919 107 ntBASIC2.54□□□□□ -2
CHMP1AQ9HD42 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
CHMP1AQ9HD42 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
CHMP1AQ9HD42 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC2.54□□□□□ -2
CHMP1AQ9HD42 RNU6-1148P-201ENST00000410992 104 ntBASIC2.54□□□□□ -2
CHMP1AQ9HD42 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC2.54□□□□□ -2
CHMP1AQ9HD42 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.54□□□□□ -2
CHMP1AQ9HD42 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.54□□□□□ -2
CHMP1AQ9HD42 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC2.54□□□□□ -2
CHMP1AQ9HD42 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
CHMP1AQ9HD42 MTATP6P13-201ENST00000438531 667 ntBASIC2.54□□□□□ -2
CHMP1AQ9HD42 AL445687.1-201ENST00000439946 251 ntBASIC2.54□□□□□ -2
CHMP1AQ9HD42 RNU7-66P-201ENST00000459469 62 ntBASIC2.54□□□□□ -2
CHMP1AQ9HD42 RPS29P2-201ENST00000479278 136 ntBASIC2.54□□□□□ -2
CHMP1AQ9HD42 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC2.54□□□□□ -2
CHMP1AQ9HD42 AC096576.1-201ENST00000489014 359 ntBASIC2.54□□□□□ -2
CHMP1AQ9HD42 FAM206BP-201ENST00000510179 541 ntBASIC2.54□□□□□ -2
CHMP1AQ9HD42 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC2.54□□□□□ -2
CHMP1AQ9HD42 SMURF2P1-201ENST00000514992 481 ntBASIC2.54□□□□□ -2
CHMP1AQ9HD42 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC2.54□□□□□ -2
CHMP1AQ9HD42 RNA5SP112-201ENST00000515937 99 ntBASIC2.54□□□□□ -2
CHMP1AQ9HD42 RN7SKP40-201ENST00000517211 242 ntBASIC2.54□□□□□ -2
CHMP1AQ9HD42 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC2.54□□□□□ -2
CHMP1AQ9HD42 AC087854.1-201ENST00000519706 414 ntBASIC2.54□□□□□ -2
CHMP1AQ9HD42 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.54□□□□□ -2
CHMP1AQ9HD42 AC004486.1-201ENST00000546846 233 ntBASIC2.54□□□□□ -2
CHMP1AQ9HD42 AC025423.5-201ENST00000550230 219 ntBASIC2.54□□□□□ -2
CHMP1AQ9HD42 SARNP-203ENST00000552080 726 ntTSL 2 BASIC2.54□□□□□ -2
CHMP1AQ9HD42 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC2.54□□□□□ -2
CHMP1AQ9HD42 AC103996.1-201ENST00000555468 102 ntBASIC2.54□□□□□ -2
CHMP1AQ9HD42 UBL5P2-201ENST00000583788 219 ntBASIC2.54□□□□□ -2
CHMP1AQ9HD42 NRBF2P5-201ENST00000603087 788 ntBASIC2.54□□□□□ -2
CHMP1AQ9HD42 AL356280.1-201ENST00000603614 379 ntBASIC2.54□□□□□ -2
CHMP1AQ9HD42 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.54□□□□□ -2
CHMP1AQ9HD42 ATP5A1P2-202ENST00000616464 443 ntBASIC2.54□□□□□ -2
CHMP1AQ9HD42 AL731566.2-201ENST00000618971 317 ntBASIC2.54□□□□□ -2
CHMP1AQ9HD42 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.54□□□□□ -2
CHMP1AQ9HD42 FO624990.1-201ENST00000636373 85 ntBASIC2.54□□□□□ -2
CHMP1AQ9HD42 AL049781.1-201ENST00000623195 3585 ntBASIC2.54□□□□□ -2
CHMP1AQ9HD42 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.53□□□□□ -2
CHMP1AQ9HD42 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
CHMP1AQ9HD42 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
CHMP1AQ9HD42 MTND4P27-201ENST00000450813 1354 ntBASIC2.53□□□□□ -2
CHMP1AQ9HD42 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.53□□□□□ -2
CHMP1AQ9HD42 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.53□□□□□ -2
CHMP1AQ9HD42 RNU6-486P-201ENST00000363116 107 ntBASIC2.53□□□□□ -2
CHMP1AQ9HD42 RNU6-254P-201ENST00000363377 107 ntBASIC2.53□□□□□ -2
CHMP1AQ9HD42 RNA5-8SP4-201ENST00000365096 150 ntBASIC2.53□□□□□ -2
CHMP1AQ9HD42 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.53□□□□□ -2
CHMP1AQ9HD42 AL590004.2-201ENST00000404787 371 ntBASIC2.53□□□□□ -2
CHMP1AQ9HD42 RNA5SP390-201ENST00000410191 113 ntBASIC2.53□□□□□ -2
CHMP1AQ9HD42 RNA5SP118-201ENST00000410385 109 ntBASIC2.53□□□□□ -2
CHMP1AQ9HD42 RNU2-25P-201ENST00000411041 191 ntBASIC2.53□□□□□ -2
CHMP1AQ9HD42 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.53□□□□□ -2
CHMP1AQ9HD42 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.53□□□□□ -2
CHMP1AQ9HD42 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.53□□□□□ -2
CHMP1AQ9HD42 BX276092.3-201ENST00000424182 230 ntBASIC2.53□□□□□ -2
CHMP1AQ9HD42 AL591043.1-201ENST00000432461 424 ntBASIC2.53□□□□□ -2
CHMP1AQ9HD42 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC2.53□□□□□ -2
CHMP1AQ9HD42 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC2.53□□□□□ -2
CHMP1AQ9HD42 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC2.53□□□□□ -2
CHMP1AQ9HD42 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC2.53□□□□□ -2
CHMP1AQ9HD42 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC2.53□□□□□ -2
CHMP1AQ9HD42 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC2.53□□□□□ -2
CHMP1AQ9HD42 AC012308.1-201ENST00000451232 178 ntBASIC2.53□□□□□ -2
CHMP1AQ9HD42 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC2.53□□□□□ -2
CHMP1AQ9HD42 AC008155.2-201ENST00000464337 397 ntBASIC2.53□□□□□ -2
CHMP1AQ9HD42 AC018437.1-201ENST00000492214 406 ntBASIC2.53□□□□□ -2
CHMP1AQ9HD42 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC2.53□□□□□ -2
CHMP1AQ9HD42 AC023141.11-201ENST00000508864 202 ntBASIC2.53□□□□□ -2
CHMP1AQ9HD42 AC091826.1-201ENST00000514065 313 ntBASIC2.53□□□□□ -2
CHMP1AQ9HD42 AC009812.2-201ENST00000517657 457 ntBASIC2.53□□□□□ -2
CHMP1AQ9HD42 ELOCP31-201ENST00000540463 467 ntBASIC2.53□□□□□ -2
CHMP1AQ9HD42 AC068944.2-201ENST00000610373 403 ntBASIC2.53□□□□□ -2
CHMP1AQ9HD42 AC018692.3-201ENST00000623929 123 ntBASIC2.53□□□□□ -2
CHMP1AQ9HD42 TEX41-300ENST00000631048 69 ntTSL 5 BASIC2.53□□□□□ -2
CHMP1AQ9HD42 MIR7157-201ENST00000635801 60 ntBASIC2.53□□□□□ -2
CHMP1AQ9HD42 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.53□□□□□ -2
CHMP1AQ9HD42 ATP8A2P2-201ENST00000437678 1568 ntBASIC2.53□□□□□ -2.01
CHMP1AQ9HD42 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2.53□□□□□ -2.01
CHMP1AQ9HD42 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
CHMP1AQ9HD42 RPL9P7-201ENST00000330965 580 ntBASIC2.52□□□□□ -2.01
CHMP1AQ9HD42 MIR22-201ENST00000362190 85 ntBASIC2.52□□□□□ -2.01
CHMP1AQ9HD42 RNU6-1010P-201ENST00000362757 107 ntBASIC2.52□□□□□ -2.01
CHMP1AQ9HD42 RNU1-72P-201ENST00000362976 153 ntBASIC2.52□□□□□ -2.01
CHMP1AQ9HD42 SNORD114-19-201ENST00000363072 75 ntBASIC2.52□□□□□ -2.01
CHMP1AQ9HD42 RNU6-529P-201ENST00000363383 104 ntBASIC2.52□□□□□ -2.01
CHMP1AQ9HD42 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
CHMP1AQ9HD42 RPS29P13-201ENST00000402041 169 ntBASIC2.52□□□□□ -2.01
CHMP1AQ9HD42 USP9YP20-201ENST00000419224 558 ntBASIC2.52□□□□□ -2.01
CHMP1AQ9HD42 AL139415.2-201ENST00000431968 163 ntBASIC2.52□□□□□ -2.01
CHMP1AQ9HD42 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.52□□□□□ -2.01
CHMP1AQ9HD42 NDUFA5P4-201ENST00000436704 385 ntBASIC2.52□□□□□ -2.01
CHMP1AQ9HD42 AC243964.1-201ENST00000441814 261 ntBASIC2.52□□□□□ -2.01
CHMP1AQ9HD42 AP000705.1-201ENST00000454567 350 ntBASIC2.52□□□□□ -2.01
CHMP1AQ9HD42 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC2.52□□□□□ -2.01
CHMP1AQ9HD42 AC103975.1-201ENST00000482506 483 ntBASIC2.52□□□□□ -2.01
CHMP1AQ9HD42 RPL22P13-201ENST00000493291 347 ntBASIC2.52□□□□□ -2.01
CHMP1AQ9HD42 CKS1BP7-201ENST00000522230 235 ntBASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms