Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 AC124303.1-201ENST00000605703 360 ntBASIC3.24□□□□□ -1.89
USP29Q9HBJ7 AC064836.2-201ENST00000609491 462 ntBASIC3.24□□□□□ -1.89
USP29Q9HBJ7 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC3.24□□□□□ -1.89
USP29Q9HBJ7 AC138627.2-201ENST00000624202 601 ntBASIC3.24□□□□□ -1.89
USP29Q9HBJ7 Z69720.2-201ENST00000624755 279 ntBASIC3.24□□□□□ -1.89
USP29Q9HBJ7 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.24□□□□□ -1.89
USP29Q9HBJ7 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC3.24□□□□□ -1.89
USP29Q9HBJ7 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
USP29Q9HBJ7 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
USP29Q9HBJ7 Y_RNA.138-201ENST00000363462 102 ntBASIC3.23□□□□□ -1.89
USP29Q9HBJ7 RNU6-1188P-201ENST00000363795 107 ntBASIC3.23□□□□□ -1.89
USP29Q9HBJ7 RNU1-140P-201ENST00000365040 165 ntBASIC3.23□□□□□ -1.89
USP29Q9HBJ7 Y_RNA.315-201ENST00000365117 102 ntBASIC3.23□□□□□ -1.89
USP29Q9HBJ7 Z98749.2-208ENST00000381646 500 ntBASIC3.23□□□□□ -1.89
USP29Q9HBJ7 RNU6-43P-201ENST00000384302 107 ntBASIC3.23□□□□□ -1.89
USP29Q9HBJ7 RNU6-1304P-201ENST00000411374 106 ntBASIC3.23□□□□□ -1.89
USP29Q9HBJ7 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.23□□□□□ -1.89
USP29Q9HBJ7 AL096701.2-201ENST00000416920 238 ntBASIC3.23□□□□□ -1.89
USP29Q9HBJ7 AL078601.1-201ENST00000444542 271 ntBASIC3.23□□□□□ -1.89
USP29Q9HBJ7 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
USP29Q9HBJ7 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC3.23□□□□□ -1.89
USP29Q9HBJ7 RN7SL75P-201ENST00000461926 281 ntBASIC3.23□□□□□ -1.89
USP29Q9HBJ7 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.23□□□□□ -1.89
USP29Q9HBJ7 AC116337.1-201ENST00000509680 687 ntBASIC3.23□□□□□ -1.89
USP29Q9HBJ7 AC096745.1-201ENST00000509945 370 ntBASIC3.23□□□□□ -1.89
USP29Q9HBJ7 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.23□□□□□ -1.89
USP29Q9HBJ7 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC3.23□□□□□ -1.89
USP29Q9HBJ7 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC3.23□□□□□ -1.89
USP29Q9HBJ7 CYCSP39-201ENST00000565821 309 ntBASIC3.23□□□□□ -1.89
USP29Q9HBJ7 AC093249.1-201ENST00000567049 203 ntBASIC3.23□□□□□ -1.89
USP29Q9HBJ7 OR1M4P-201ENST00000589199 287 ntBASIC3.23□□□□□ -1.89
USP29Q9HBJ7 AL645944.1-201ENST00000603857 493 ntBASIC3.23□□□□□ -1.89
USP29Q9HBJ7 HSPE1P7-201ENST00000604681 321 ntBASIC3.23□□□□□ -1.89
USP29Q9HBJ7 AC084781.2-201ENST00000615568 161 ntBASIC3.23□□□□□ -1.89
USP29Q9HBJ7 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC3.23□□□□□ -1.89
USP29Q9HBJ7 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.23□□□□□ -1.89
USP29Q9HBJ7 RNU6-593P-201ENST00000364716 112 ntBASIC3.22□□□□□ -1.89
USP29Q9HBJ7 SNORD42.2-201ENST00000365570 69 ntBASIC3.22□□□□□ -1.89
USP29Q9HBJ7 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.22□□□□□ -1.89
USP29Q9HBJ7 RNU6-1035P-201ENST00000384477 107 ntBASIC3.22□□□□□ -1.89
USP29Q9HBJ7 RNU6-601P-201ENST00000384540 107 ntBASIC3.22□□□□□ -1.89
USP29Q9HBJ7 MIR10A-201ENST00000385043 110 ntBASIC3.22□□□□□ -1.89
USP29Q9HBJ7 MTCYBP4-201ENST00000401524 249 ntBASIC3.22□□□□□ -1.89
USP29Q9HBJ7 AL138885.1-201ENST00000405921 675 ntBASIC3.22□□□□□ -1.89
USP29Q9HBJ7 RN7SKP123-201ENST00000410732 291 ntBASIC3.22□□□□□ -1.89
USP29Q9HBJ7 RNA5SP38-201ENST00000410750 119 ntBASIC3.22□□□□□ -1.89
USP29Q9HBJ7 AC245054.2-201ENST00000415639 319 ntBASIC3.22□□□□□ -1.89
USP29Q9HBJ7 AC016831.2-201ENST00000417179 352 ntBASIC3.22□□□□□ -1.89
USP29Q9HBJ7 MTCO2P27-201ENST00000420740 428 ntBASIC3.22□□□□□ -1.89
USP29Q9HBJ7 PGBD4P6-201ENST00000421501 610 ntBASIC3.22□□□□□ -1.89
USP29Q9HBJ7 HMGN2P13-201ENST00000476476 274 ntBASIC3.22□□□□□ -1.89
USP29Q9HBJ7 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC3.22□□□□□ -1.89
USP29Q9HBJ7 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.22□□□□□ -1.89
USP29Q9HBJ7 AC006445.2-201ENST00000510061 472 ntBASIC3.22□□□□□ -1.89
USP29Q9HBJ7 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.22□□□□□ -1.89
USP29Q9HBJ7 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC3.22□□□□□ -1.89
USP29Q9HBJ7 H3F3AP1-201ENST00000559984 334 ntBASIC3.22□□□□□ -1.89
USP29Q9HBJ7 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
USP29Q9HBJ7 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC3.22□□□□□ -1.89
USP29Q9HBJ7 RNU6ATAC35P-201ENST00000609276 444 ntBASIC3.22□□□□□ -1.89
USP29Q9HBJ7 AC010378.1-201ENST00000619270 362 ntBASIC3.22□□□□□ -1.89
USP29Q9HBJ7 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.22□□□□□ -1.89
USP29Q9HBJ7 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
USP29Q9HBJ7 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
USP29Q9HBJ7 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.22□□□□□ -1.89
USP29Q9HBJ7 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
USP29Q9HBJ7 MTND5P19-201ENST00000424872 1794 ntBASIC3.21□□□□□ -1.9
USP29Q9HBJ7 MIR422A-201ENST00000362286 90 ntBASIC3.21□□□□□ -1.9
USP29Q9HBJ7 SNORD62.1-201ENST00000362541 86 ntBASIC3.21□□□□□ -1.9
USP29Q9HBJ7 RNU6-37P-201ENST00000362692 107 ntBASIC3.21□□□□□ -1.9
USP29Q9HBJ7 RNU6-11P-201ENST00000364234 107 ntBASIC3.21□□□□□ -1.9
USP29Q9HBJ7 RNU6-7-201ENST00000364784 107 ntBASIC3.21□□□□□ -1.9
USP29Q9HBJ7 RNU6-8-201ENST00000365467 107 ntBASIC3.21□□□□□ -1.9
USP29Q9HBJ7 RNU6-25P-201ENST00000383873 107 ntBASIC3.21□□□□□ -1.9
USP29Q9HBJ7 RNU6-1-201ENST00000383898 107 ntBASIC3.21□□□□□ -1.9
USP29Q9HBJ7 RNU6-48P-201ENST00000384161 107 ntBASIC3.21□□□□□ -1.9
USP29Q9HBJ7 RNU6-36P-201ENST00000384172 107 ntBASIC3.21□□□□□ -1.9
USP29Q9HBJ7 RNU6-4P-201ENST00000384205 107 ntBASIC3.21□□□□□ -1.9
USP29Q9HBJ7 RNU6-5P-201ENST00000384238 107 ntBASIC3.21□□□□□ -1.9
USP29Q9HBJ7 RNU6-3P-201ENST00000384314 107 ntBASIC3.21□□□□□ -1.9
USP29Q9HBJ7 RNU6-16P-201ENST00000384385 107 ntBASIC3.21□□□□□ -1.9
USP29Q9HBJ7 RNU6-15P-201ENST00000384534 107 ntBASIC3.21□□□□□ -1.9
USP29Q9HBJ7 RNU6-2-201ENST00000384627 107 ntBASIC3.21□□□□□ -1.9
USP29Q9HBJ7 RNU6-29P-201ENST00000384637 107 ntBASIC3.21□□□□□ -1.9
USP29Q9HBJ7 SNORA46-201ENST00000384762 135 ntBASIC3.21□□□□□ -1.9
USP29Q9HBJ7 RNU6-9-201ENST00000384776 107 ntBASIC3.21□□□□□ -1.9
USP29Q9HBJ7 RNU6-33P-201ENST00000384793 107 ntBASIC3.21□□□□□ -1.9
USP29Q9HBJ7 SNORD56-201ENST00000413522 71 ntBASIC3.21□□□□□ -1.9
USP29Q9HBJ7 AC007560.1-201ENST00000426912 237 ntBASIC3.21□□□□□ -1.9
USP29Q9HBJ7 MTCO2P12-201ENST00000427426 682 ntBASIC3.21□□□□□ -1.9
USP29Q9HBJ7 AC005534.2-201ENST00000431047 433 ntBASIC3.21□□□□□ -1.9
USP29Q9HBJ7 AC244505.4-201ENST00000434905 287 ntBASIC3.21□□□□□ -1.9
USP29Q9HBJ7 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.21□□□□□ -1.9
USP29Q9HBJ7 SSXP5-201ENST00000443473 287 ntBASIC3.21□□□□□ -1.9
USP29Q9HBJ7 MTATP6P7-201ENST00000453315 681 ntBASIC3.21□□□□□ -1.9
USP29Q9HBJ7 Y_RNA.639-201ENST00000458981 102 ntBASIC3.21□□□□□ -1.9
USP29Q9HBJ7 RNU7-187P-201ENST00000458985 68 ntBASIC3.21□□□□□ -1.9
USP29Q9HBJ7 AL049873.1-201ENST00000480540 376 ntBASIC3.21□□□□□ -1.9
USP29Q9HBJ7 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
USP29Q9HBJ7 AC026782.1-201ENST00000512952 449 ntBASIC3.21□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 149.2 ms