Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC1.86□□□□□ -2.11
LRRC40Q9H9A6 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC1.86□□□□□ -2.11
LRRC40Q9H9A6 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC1.86□□□□□ -2.11
LRRC40Q9H9A6 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC1.86□□□□□ -2.11
LRRC40Q9H9A6 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC1.86□□□□□ -2.11
LRRC40Q9H9A6 BNIP3P6-201ENST00000549284 499 ntBASIC1.86□□□□□ -2.11
LRRC40Q9H9A6 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC1.86□□□□□ -2.11
LRRC40Q9H9A6 BNIP3P25-201ENST00000596023 559 ntBASIC1.86□□□□□ -2.11
LRRC40Q9H9A6 AC012065.4-201ENST00000602445 679 ntBASIC1.86□□□□□ -2.11
LRRC40Q9H9A6 AP000240.1-201ENST00000609910 452 ntBASIC1.86□□□□□ -2.11
LRRC40Q9H9A6 AC007792.1-201ENST00000623023 402 ntBASIC1.86□□□□□ -2.11
LRRC40Q9H9A6 SNORD56.1-201ENST00000362913 68 ntBASIC1.85□□□□□ -2.11
LRRC40Q9H9A6 RNU6-944P-201ENST00000364023 107 ntBASIC1.85□□□□□ -2.11
LRRC40Q9H9A6 RNU6-384P-201ENST00000364900 104 ntBASIC1.85□□□□□ -2.11
LRRC40Q9H9A6 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC1.85□□□□□ -2.11
LRRC40Q9H9A6 RNU6-641P-201ENST00000384006 107 ntBASIC1.85□□□□□ -2.11
LRRC40Q9H9A6 SNORA24.1-201ENST00000384401 135 ntBASIC1.85□□□□□ -2.11
LRRC40Q9H9A6 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.85□□□□□ -2.11
LRRC40Q9H9A6 AL445685.2-201ENST00000422551 342 ntBASIC1.85□□□□□ -2.11
LRRC40Q9H9A6 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC1.85□□□□□ -2.11
LRRC40Q9H9A6 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC1.85□□□□□ -2.11
LRRC40Q9H9A6 AL589872.1-201ENST00000426602 288 ntBASIC1.85□□□□□ -2.11
LRRC40Q9H9A6 TOMM20P4-201ENST00000427861 435 ntBASIC1.85□□□□□ -2.11
LRRC40Q9H9A6 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC1.85□□□□□ -2.11
LRRC40Q9H9A6 HMGB1P31-201ENST00000437242 427 ntBASIC1.85□□□□□ -2.11
LRRC40Q9H9A6 RPS24P1-201ENST00000438550 371 ntBASIC1.85□□□□□ -2.11
LRRC40Q9H9A6 AL512286.1-201ENST00000439244 400 ntBASIC1.85□□□□□ -2.11
LRRC40Q9H9A6 snoU13.14-201ENST00000459372 104 ntBASIC1.85□□□□□ -2.11
LRRC40Q9H9A6 PTP4A1P4-201ENST00000512479 322 ntBASIC1.85□□□□□ -2.11
LRRC40Q9H9A6 AC117532.1-201ENST00000514638 323 ntBASIC1.85□□□□□ -2.11
LRRC40Q9H9A6 RN7SKP256-201ENST00000517201 314 ntBASIC1.85□□□□□ -2.11
LRRC40Q9H9A6 AP005660.1-201ENST00000522972 293 ntBASIC1.85□□□□□ -2.11
LRRC40Q9H9A6 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC1.85□□□□□ -2.11
LRRC40Q9H9A6 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC1.85□□□□□ -2.11
LRRC40Q9H9A6 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC1.85□□□□□ -2.11
LRRC40Q9H9A6 MIR4513-201ENST00000581077 86 ntBASIC1.85□□□□□ -2.11
LRRC40Q9H9A6 AC016597.2-201ENST00000613256 341 ntBASIC1.85□□□□□ -2.11
LRRC40Q9H9A6 AC027807.2-201ENST00000616099 408 ntBASIC1.85□□□□□ -2.11
LRRC40Q9H9A6 AC092140.2-201ENST00000618027 521 ntBASIC1.85□□□□□ -2.11
LRRC40Q9H9A6 AL157786.1-207ENST00000627771 695 ntBASIC1.85□□□□□ -2.11
LRRC40Q9H9A6 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.84□□□□□ -2.11
LRRC40Q9H9A6 SNORD14D-201ENST00000384390 87 ntBASIC1.84□□□□□ -2.11
LRRC40Q9H9A6 MIR29B2-201ENST00000385055 81 ntBASIC1.84□□□□□ -2.11
LRRC40Q9H9A6 AL031779.1-201ENST00000415663 330 ntBASIC1.84□□□□□ -2.11
LRRC40Q9H9A6 MTCYBP5-201ENST00000423752 1135 ntBASIC1.84□□□□□ -2.11
LRRC40Q9H9A6 USP9YP18-201ENST00000425912 695 ntBASIC1.84□□□□□ -2.11
LRRC40Q9H9A6 USP9YP15-201ENST00000442391 422 ntBASIC1.84□□□□□ -2.11
LRRC40Q9H9A6 RNA5SP57-201ENST00000459463 123 ntBASIC1.84□□□□□ -2.11
LRRC40Q9H9A6 RPL30P12-201ENST00000474666 353 ntBASIC1.84□□□□□ -2.11
LRRC40Q9H9A6 AC020699.1-201ENST00000505161 445 ntBASIC1.84□□□□□ -2.11
LRRC40Q9H9A6 RNA5SP182-201ENST00000516064 82 ntBASIC1.84□□□□□ -2.11
LRRC40Q9H9A6 RNU6-965P-201ENST00000516721 96 ntBASIC1.84□□□□□ -2.11
LRRC40Q9H9A6 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC1.84□□□□□ -2.11
LRRC40Q9H9A6 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC1.84□□□□□ -2.11
LRRC40Q9H9A6 SEPT7P9-203ENST00000604116 343 ntBASIC1.84□□□□□ -2.11
LRRC40Q9H9A6 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC1.84□□□□□ -2.11
LRRC40Q9H9A6 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
LRRC40Q9H9A6 snoU2_19.1-201ENST00000362361 80 ntBASIC1.83□□□□□ -2.12
LRRC40Q9H9A6 RNU5F-7P-201ENST00000363696 115 ntBASIC1.83□□□□□ -2.12
LRRC40Q9H9A6 RNU6-743P-201ENST00000364151 106 ntBASIC1.83□□□□□ -2.12
LRRC40Q9H9A6 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC1.83□□□□□ -2.12
LRRC40Q9H9A6 MIR558-201ENST00000384920 94 ntBASIC1.83□□□□□ -2.12
LRRC40Q9H9A6 RNU4-26P-201ENST00000410270 107 ntBASIC1.83□□□□□ -2.12
LRRC40Q9H9A6 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC1.83□□□□□ -2.12
LRRC40Q9H9A6 MED13P1-201ENST00000428342 171 ntBASIC1.83□□□□□ -2.12
LRRC40Q9H9A6 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC1.83□□□□□ -2.12
LRRC40Q9H9A6 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC1.83□□□□□ -2.12
LRRC40Q9H9A6 AL353752.1-201ENST00000454946 260 ntBASIC1.83□□□□□ -2.12
LRRC40Q9H9A6 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1.83□□□□□ -2.12
LRRC40Q9H9A6 AC092436.1-201ENST00000506450 503 ntBASIC1.83□□□□□ -2.12
LRRC40Q9H9A6 RBBP4P6-201ENST00000508098 202 ntBASIC1.83□□□□□ -2.12
LRRC40Q9H9A6 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC1.83□□□□□ -2.12
LRRC40Q9H9A6 AC110588.1-201ENST00000559699 137 ntBASIC1.83□□□□□ -2.12
LRRC40Q9H9A6 UBE2Q2P8-201ENST00000560644 102 ntBASIC1.83□□□□□ -2.12
LRRC40Q9H9A6 MIR4419B-201ENST00000577260 68 ntBASIC1.83□□□□□ -2.12
LRRC40Q9H9A6 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.83□□□□□ -2.12
LRRC40Q9H9A6 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC1.83□□□□□ -2.12
LRRC40Q9H9A6 AC026585.1-201ENST00000619582 524 ntBASIC1.83□□□□□ -2.12
LRRC40Q9H9A6 AC009878.1-201ENST00000621819 340 ntBASIC1.83□□□□□ -2.12
LRRC40Q9H9A6 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
LRRC40Q9H9A6 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC1.83□□□□□ -2.12
LRRC40Q9H9A6 AC002543.1-201ENST00000299783 1954 ntBASIC1.82□□□□□ -2.12
LRRC40Q9H9A6 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC1.82□□□□□ -2.12
LRRC40Q9H9A6 RNU6-500P-201ENST00000362349 107 ntBASIC1.82□□□□□ -2.12
LRRC40Q9H9A6 MIR23A-201ENST00000385245 73 ntBASIC1.82□□□□□ -2.12
LRRC40Q9H9A6 BTF3L4P2-201ENST00000392798 346 ntBASIC1.82□□□□□ -2.12
LRRC40Q9H9A6 SRIP3-201ENST00000413200 219 ntBASIC1.82□□□□□ -2.12
LRRC40Q9H9A6 RPL21P90-201ENST00000415692 466 ntBASIC1.82□□□□□ -2.12
LRRC40Q9H9A6 AC003989.2-201ENST00000440224 169 ntBASIC1.82□□□□□ -2.12
LRRC40Q9H9A6 Z73417.1-201ENST00000447373 778 ntBASIC1.82□□□□□ -2.12
LRRC40Q9H9A6 AL360271.2-201ENST00000447710 161 ntBASIC1.82□□□□□ -2.12
LRRC40Q9H9A6 FDX1P2-201ENST00000450769 375 ntBASIC1.82□□□□□ -2.12
LRRC40Q9H9A6 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC1.82□□□□□ -2.12
LRRC40Q9H9A6 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC1.82□□□□□ -2.12
LRRC40Q9H9A6 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.82□□□□□ -2.12
LRRC40Q9H9A6 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC1.82□□□□□ -2.12
LRRC40Q9H9A6 AC024614.2-201ENST00000577584 372 ntBASIC1.82□□□□□ -2.12
LRRC40Q9H9A6 MIR3618-201ENST00000580330 88 ntBASIC1.82□□□□□ -2.12
LRRC40Q9H9A6 MIR5692A1-201ENST00000580523 69 ntBASIC1.82□□□□□ -2.12
LRRC40Q9H9A6 MIR4713-201ENST00000582691 75 ntBASIC1.82□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 97.9 ms