Protein–RNA interactions for Protein: Q9H0E7

USP44, Ubiquitin carboxyl-terminal hydrolase 44, humanhuman

Predictions only

Length 712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP44Q9H0E7 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC3.01□□□□□ -1.93
USP44Q9H0E7 SCARNA18-201ENST00000459004 134 ntBASIC3.01□□□□□ -1.93
USP44Q9H0E7 RNU7-180P-201ENST00000459240 63 ntBASIC3.01□□□□□ -1.93
USP44Q9H0E7 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC3.01□□□□□ -1.93
USP44Q9H0E7 AC092989.1-201ENST00000481235 277 ntBASIC3.01□□□□□ -1.93
USP44Q9H0E7 RPS27P27-201ENST00000498779 255 ntBASIC3.01□□□□□ -1.93
USP44Q9H0E7 MTCO3P9-201ENST00000506989 781 ntBASIC3.01□□□□□ -1.93
USP44Q9H0E7 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC3.01□□□□□ -1.93
USP44Q9H0E7 AF213884.2-201ENST00000510417 903 ntBASIC3.01□□□□□ -1.93
USP44Q9H0E7 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.01□□□□□ -1.93
USP44Q9H0E7 RNU6-56P-201ENST00000516986 93 ntBASIC3.01□□□□□ -1.93
USP44Q9H0E7 AP004607.1-201ENST00000524456 203 ntBASIC3.01□□□□□ -1.93
USP44Q9H0E7 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC3.01□□□□□ -1.93
USP44Q9H0E7 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC3.01□□□□□ -1.93
USP44Q9H0E7 AL121821.2-201ENST00000556081 394 ntBASIC3.01□□□□□ -1.93
USP44Q9H0E7 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.01□□□□□ -1.93
USP44Q9H0E7 MTCO3P13-201ENST00000577757 781 ntBASIC3.01□□□□□ -1.93
USP44Q9H0E7 AP000787.2-201ENST00000604432 568 ntBASIC3.01□□□□□ -1.93
USP44Q9H0E7 AC067747.1-201ENST00000608026 250 ntBASIC3.01□□□□□ -1.93
USP44Q9H0E7 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC3.01□□□□□ -1.93
USP44Q9H0E7 YWHAEP7-203ENST00000622054 312 ntBASIC3.01□□□□□ -1.93
USP44Q9H0E7 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.01□□□□□ -1.93
USP44Q9H0E7 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.01□□□□□ -1.93
USP44Q9H0E7 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC3□□□□□ -1.93
USP44Q9H0E7 AC010329.5-201ENST00000623497 2174 ntBASIC3□□□□□ -1.93
USP44Q9H0E7 DLEU2_6.3-201ENST00000340052 136 ntBASIC3□□□□□ -1.93
USP44Q9H0E7 RNU6-1083P-201ENST00000384022 107 ntBASIC3□□□□□ -1.93
USP44Q9H0E7 AL606923.1-201ENST00000406616 190 ntBASIC3□□□□□ -1.93
USP44Q9H0E7 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC3□□□□□ -1.93
USP44Q9H0E7 AL669831.1-202ENST00000428504 417 ntBASIC3□□□□□ -1.93
USP44Q9H0E7 AC000111.3-201ENST00000433478 193 ntBASIC3□□□□□ -1.93
USP44Q9H0E7 GTF2IP13-201ENST00000438487 386 ntBASIC3□□□□□ -1.93
USP44Q9H0E7 RPS12P2-201ENST00000439728 269 ntBASIC3□□□□□ -1.93
USP44Q9H0E7 HIGD1AP2-201ENST00000446367 280 ntBASIC3□□□□□ -1.93
USP44Q9H0E7 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC3□□□□□ -1.93
USP44Q9H0E7 FGF7P6-202ENST00000451282 293 ntBASIC3□□□□□ -1.93
USP44Q9H0E7 AC116655.1-201ENST00000508324 901 ntBASIC3□□□□□ -1.93
USP44Q9H0E7 AC234781.5-201ENST00000508429 271 ntBASIC3□□□□□ -1.93
USP44Q9H0E7 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC3□□□□□ -1.93
USP44Q9H0E7 MTND1P35-201ENST00000526739 508 ntBASIC3□□□□□ -1.93
USP44Q9H0E7 MDM2-233ENST00000545204 398 ntTSL 5 BASIC3□□□□□ -1.93
USP44Q9H0E7 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC3□□□□□ -1.93
USP44Q9H0E7 AC091152.3-201ENST00000604227 325 ntBASIC3□□□□□ -1.93
USP44Q9H0E7 AL627309.6-201ENST00000606857 840 ntBASIC3□□□□□ -1.93
USP44Q9H0E7 AC068944.2-201ENST00000610373 403 ntBASIC3□□□□□ -1.93
USP44Q9H0E7 DLEU2_6.2-201ENST00000620994 136 ntBASIC3□□□□□ -1.93
USP44Q9H0E7 FER-210ENST00000628534 558 ntTSL 5 BASIC3□□□□□ -1.93
USP44Q9H0E7 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3□□□□□ -1.93
USP44Q9H0E7 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
USP44Q9H0E7 HAUS6P2-201ENST00000433254 2404 ntBASIC2.99□□□□□ -1.93
USP44Q9H0E7 Y_RNA.453-201ENST00000384223 109 ntBASIC2.99□□□□□ -1.93
USP44Q9H0E7 MIR10A-201ENST00000385043 110 ntBASIC2.99□□□□□ -1.93
USP44Q9H0E7 SNORD70.1-201ENST00000391007 85 ntBASIC2.99□□□□□ -1.93
USP44Q9H0E7 AC104389.3-201ENST00000445629 235 ntBASIC2.99□□□□□ -1.93
USP44Q9H0E7 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC2.99□□□□□ -1.93
USP44Q9H0E7 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC2.99□□□□□ -1.93
USP44Q9H0E7 RNU2-69P-201ENST00000516061 100 ntBASIC2.99□□□□□ -1.93
USP44Q9H0E7 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.99□□□□□ -1.93
USP44Q9H0E7 MIR4424-201ENST00000585257 86 ntBASIC2.99□□□□□ -1.93
USP44Q9H0E7 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC2.99□□□□□ -1.93
USP44Q9H0E7 AC078899.3-201ENST00000599065 212 ntBASIC2.99□□□□□ -1.93
USP44Q9H0E7 U2.17-201ENST00000611454 95 ntBASIC2.99□□□□□ -1.93
USP44Q9H0E7 uc_338.34-201ENST00000617467 174 ntBASIC2.99□□□□□ -1.93
USP44Q9H0E7 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC2.99□□□□□ -1.93
USP44Q9H0E7 MTND5P30-201ENST00000452896 1731 ntBASIC2.99□□□□□ -1.93
USP44Q9H0E7 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.99□□□□□ -1.93
USP44Q9H0E7 Y_RNA.89-201ENST00000363031 102 ntBASIC2.98□□□□□ -1.93
USP44Q9H0E7 SNORA68.1-201ENST00000364537 132 ntBASIC2.98□□□□□ -1.93
USP44Q9H0E7 RNU6-534P-201ENST00000364877 106 ntBASIC2.98□□□□□ -1.93
USP44Q9H0E7 U8.9-201ENST00000365667 134 ntBASIC2.98□□□□□ -1.93
USP44Q9H0E7 RNU6-72P-201ENST00000384285 79 ntBASIC2.98□□□□□ -1.93
USP44Q9H0E7 RNU6-1068P-201ENST00000410958 103 ntBASIC2.98□□□□□ -1.93
USP44Q9H0E7 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC2.98□□□□□ -1.93
USP44Q9H0E7 AC018634.1-201ENST00000437554 401 ntBASIC2.98□□□□□ -1.93
USP44Q9H0E7 CALM1P1-201ENST00000442082 433 ntBASIC2.98□□□□□ -1.93
USP44Q9H0E7 PRPS1P1-201ENST00000445305 876 ntBASIC2.98□□□□□ -1.93
USP44Q9H0E7 RNU7-167P-201ENST00000459160 62 ntBASIC2.98□□□□□ -1.93
USP44Q9H0E7 RN7SL499P-201ENST00000481141 276 ntBASIC2.98□□□□□ -1.93
USP44Q9H0E7 RPL38P4-201ENST00000502376 214 ntBASIC2.98□□□□□ -1.93
USP44Q9H0E7 GZMAP1-201ENST00000503054 631 ntBASIC2.98□□□□□ -1.93
USP44Q9H0E7 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.98□□□□□ -1.93
USP44Q9H0E7 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
USP44Q9H0E7 TBCAP3-201ENST00000512475 312 ntBASIC2.98□□□□□ -1.93
USP44Q9H0E7 RNU5F-8P-201ENST00000515941 111 ntBASIC2.98□□□□□ -1.93
USP44Q9H0E7 AC069113.1-201ENST00000517763 267 ntBASIC2.98□□□□□ -1.93
USP44Q9H0E7 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC2.98□□□□□ -1.93
USP44Q9H0E7 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.98□□□□□ -1.93
USP44Q9H0E7 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC2.98□□□□□ -1.93
USP44Q9H0E7 AC021269.2-201ENST00000532318 330 ntBASIC2.98□□□□□ -1.93
USP44Q9H0E7 AL138976.2-201ENST00000563989 694 ntBASIC2.98□□□□□ -1.93
USP44Q9H0E7 MIR5583-1-201ENST00000580941 59 ntBASIC2.98□□□□□ -1.93
USP44Q9H0E7 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC2.98□□□□□ -1.93
USP44Q9H0E7 AC073539.2-201ENST00000597113 165 ntBASIC2.98□□□□□ -1.93
USP44Q9H0E7 AC019159.1-201ENST00000605094 187 ntBASIC2.98□□□□□ -1.93
USP44Q9H0E7 DISC2.1-201ENST00000612827 205 ntBASIC2.98□□□□□ -1.93
USP44Q9H0E7 AL031601.2-202ENST00000622650 282 ntBASIC2.98□□□□□ -1.93
USP44Q9H0E7 AC002064.3-201ENST00000623448 346 ntBASIC2.98□□□□□ -1.93
USP44Q9H0E7 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.98□□□□□ -1.93
USP44Q9H0E7 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC2.98□□□□□ -1.93
USP44Q9H0E7 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 115.9 ms