Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.29□□□□□ -1.88
AMBRA1Q9C0C7 AC022336.2-201ENST00000568966 2538 ntBASIC3.29□□□□□ -1.88
AMBRA1Q9C0C7 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
AMBRA1Q9C0C7 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC3.29□□□□□ -1.88
AMBRA1Q9C0C7 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
AMBRA1Q9C0C7 ZNF807-201ENST00000328088 1707 ntBASIC3.28□□□□□ -1.88
AMBRA1Q9C0C7 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
AMBRA1Q9C0C7 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
AMBRA1Q9C0C7 Y_RNA.48-201ENST00000362710 103 ntBASIC3.28□□□□□ -1.88
AMBRA1Q9C0C7 RNU6-778P-201ENST00000363269 103 ntBASIC3.28□□□□□ -1.88
AMBRA1Q9C0C7 RNU1-115P-201ENST00000365329 160 ntBASIC3.28□□□□□ -1.88
AMBRA1Q9C0C7 RNU6-72P-201ENST00000384285 79 ntBASIC3.28□□□□□ -1.88
AMBRA1Q9C0C7 RPL21P17-201ENST00000397467 475 ntBASIC3.28□□□□□ -1.88
AMBRA1Q9C0C7 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC3.28□□□□□ -1.88
AMBRA1Q9C0C7 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC3.28□□□□□ -1.88
AMBRA1Q9C0C7 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.28□□□□□ -1.88
AMBRA1Q9C0C7 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC3.28□□□□□ -1.88
AMBRA1Q9C0C7 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.28□□□□□ -1.88
AMBRA1Q9C0C7 AP000907.1-201ENST00000428428 510 ntBASIC3.28□□□□□ -1.88
AMBRA1Q9C0C7 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
AMBRA1Q9C0C7 CYCSP32-201ENST00000440548 321 ntBASIC3.28□□□□□ -1.88
AMBRA1Q9C0C7 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC3.28□□□□□ -1.88
AMBRA1Q9C0C7 CYCSP35-201ENST00000451978 304 ntBASIC3.28□□□□□ -1.88
AMBRA1Q9C0C7 GSTA11P-201ENST00000452866 669 ntBASIC3.28□□□□□ -1.88
AMBRA1Q9C0C7 HMGN2P16-201ENST00000456802 261 ntBASIC3.28□□□□□ -1.88
AMBRA1Q9C0C7 AC022447.4-201ENST00000504053 364 ntBASIC3.28□□□□□ -1.88
AMBRA1Q9C0C7 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC3.28□□□□□ -1.88
AMBRA1Q9C0C7 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.28□□□□□ -1.88
AMBRA1Q9C0C7 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.28□□□□□ -1.88
AMBRA1Q9C0C7 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.28□□□□□ -1.88
AMBRA1Q9C0C7 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC3.28□□□□□ -1.88
AMBRA1Q9C0C7 UBE2Q2P8-201ENST00000560644 102 ntBASIC3.28□□□□□ -1.88
AMBRA1Q9C0C7 MIR4680-201ENST00000580906 66 ntBASIC3.28□□□□□ -1.88
AMBRA1Q9C0C7 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.28□□□□□ -1.88
AMBRA1Q9C0C7 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC3.28□□□□□ -1.88
AMBRA1Q9C0C7 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
AMBRA1Q9C0C7 U4.7-201ENST00000638126 106 ntBASIC3.28□□□□□ -1.88
AMBRA1Q9C0C7 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
AMBRA1Q9C0C7 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.28□□□□□ -1.89
AMBRA1Q9C0C7 CUL1P1-201ENST00000509510 2425 ntBASIC3.28□□□□□ -1.89
AMBRA1Q9C0C7 AP001148.1-201ENST00000624124 2359 ntBASIC3.27□□□□□ -1.89
AMBRA1Q9C0C7 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
AMBRA1Q9C0C7 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
AMBRA1Q9C0C7 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
AMBRA1Q9C0C7 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
AMBRA1Q9C0C7 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
AMBRA1Q9C0C7 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.27□□□□□ -1.89
AMBRA1Q9C0C7 RNU6-428P-201ENST00000362942 107 ntBASIC3.27□□□□□ -1.89
AMBRA1Q9C0C7 RNU6-884P-201ENST00000363889 107 ntBASIC3.27□□□□□ -1.89
AMBRA1Q9C0C7 RNU5E-7P-201ENST00000365290 117 ntBASIC3.27□□□□□ -1.89
AMBRA1Q9C0C7 RNU6-805P-201ENST00000365643 106 ntBASIC3.27□□□□□ -1.89
AMBRA1Q9C0C7 Z98749.2-208ENST00000381646 500 ntBASIC3.27□□□□□ -1.89
AMBRA1Q9C0C7 RNU1-73P-201ENST00000383971 164 ntBASIC3.27□□□□□ -1.89
AMBRA1Q9C0C7 RNU6-658P-201ENST00000384606 106 ntBASIC3.27□□□□□ -1.89
AMBRA1Q9C0C7 MIR521-1-201ENST00000384902 87 ntBASIC3.27□□□□□ -1.89
AMBRA1Q9C0C7 U3.37-201ENST00000408528 213 ntBASIC3.27□□□□□ -1.89
AMBRA1Q9C0C7 HNRNPDLP1-201ENST00000412834 550 ntBASIC3.27□□□□□ -1.89
AMBRA1Q9C0C7 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC3.27□□□□□ -1.89
AMBRA1Q9C0C7 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.27□□□□□ -1.89
AMBRA1Q9C0C7 HMGN2P30-201ENST00000423237 256 ntBASIC3.27□□□□□ -1.89
AMBRA1Q9C0C7 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC3.27□□□□□ -1.89
AMBRA1Q9C0C7 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.27□□□□□ -1.89
AMBRA1Q9C0C7 AC099799.1-201ENST00000439809 192 ntBASIC3.27□□□□□ -1.89
AMBRA1Q9C0C7 AL357552.1-201ENST00000445254 415 ntBASIC3.27□□□□□ -1.89
AMBRA1Q9C0C7 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.27□□□□□ -1.89
AMBRA1Q9C0C7 RN7SL594P-201ENST00000470590 287 ntBASIC3.27□□□□□ -1.89
AMBRA1Q9C0C7 HMGN2P13-201ENST00000476476 274 ntBASIC3.27□□□□□ -1.89
AMBRA1Q9C0C7 FO393415.2-201ENST00000480085 343 ntBASIC3.27□□□□□ -1.89
AMBRA1Q9C0C7 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC3.27□□□□□ -1.89
AMBRA1Q9C0C7 AC015911.1-201ENST00000495111 156 ntBASIC3.27□□□□□ -1.89
AMBRA1Q9C0C7 AC114801.2-201ENST00000503825 781 ntBASIC3.27□□□□□ -1.89
AMBRA1Q9C0C7 RNU6-1046P-201ENST00000516538 107 ntBASIC3.27□□□□□ -1.89
AMBRA1Q9C0C7 AC104027.1-201ENST00000521887 300 ntBASIC3.27□□□□□ -1.89
AMBRA1Q9C0C7 CBX3P8-201ENST00000532412 525 ntBASIC3.27□□□□□ -1.89
AMBRA1Q9C0C7 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.27□□□□□ -1.89
AMBRA1Q9C0C7 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC3.27□□□□□ -1.89
AMBRA1Q9C0C7 AC011471.1-201ENST00000585766 187 ntBASIC3.27□□□□□ -1.89
AMBRA1Q9C0C7 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.27□□□□□ -1.89
AMBRA1Q9C0C7 AC092447.9-201ENST00000603395 144 ntBASIC3.27□□□□□ -1.89
AMBRA1Q9C0C7 MIR8076-201ENST00000611401 83 ntBASIC3.27□□□□□ -1.89
AMBRA1Q9C0C7 AC090617.7-201ENST00000623952 126 ntBASIC3.27□□□□□ -1.89
AMBRA1Q9C0C7 SCARNA4-202ENST00000625402 129 ntBASIC3.27□□□□□ -1.89
AMBRA1Q9C0C7 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
AMBRA1Q9C0C7 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.27□□□□□ -1.89
AMBRA1Q9C0C7 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
AMBRA1Q9C0C7 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
AMBRA1Q9C0C7 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
AMBRA1Q9C0C7 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
AMBRA1Q9C0C7 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.26□□□□□ -1.89
AMBRA1Q9C0C7 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.26□□□□□ -1.89
AMBRA1Q9C0C7 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.26□□□□□ -1.89
AMBRA1Q9C0C7 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.26□□□□□ -1.89
AMBRA1Q9C0C7 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
AMBRA1Q9C0C7 RNU6-1035P-201ENST00000384477 107 ntBASIC3.26□□□□□ -1.89
AMBRA1Q9C0C7 MIR888-201ENST00000401186 77 ntBASIC3.26□□□□□ -1.89
AMBRA1Q9C0C7 AL356057.3-201ENST00000402607 340 ntBASIC3.26□□□□□ -1.89
AMBRA1Q9C0C7 AL591034.2-201ENST00000402839 359 ntBASIC3.26□□□□□ -1.89
AMBRA1Q9C0C7 RN7SKP53-201ENST00000411337 315 ntBASIC3.26□□□□□ -1.89
AMBRA1Q9C0C7 ATP5A1P2-201ENST00000412323 255 ntBASIC3.26□□□□□ -1.89
AMBRA1Q9C0C7 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 110.6 ms