Protein–RNA interactions for Protein: Q9C0A0

CNTNAP4, Contactin-associated protein-like 4, humanhuman

Predictions only

Length 1,308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP4Q9C0A0 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC4.38□□□□□ -1.71
CNTNAP4Q9C0A0 AL592437.2-201ENST00000421655 2434 ntBASIC4.38□□□□□ -1.71
CNTNAP4Q9C0A0 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CNTNAP4Q9C0A0 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
CNTNAP4Q9C0A0 AL450326.2-201ENST00000421913 1962 ntBASIC4.38□□□□□ -1.71
CNTNAP4Q9C0A0 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CNTNAP4Q9C0A0 Y_RNA.352-201ENST00000365439 102 ntBASIC4.38□□□□□ -1.71
CNTNAP4Q9C0A0 Y_RNA.464-201ENST00000384282 110 ntBASIC4.38□□□□□ -1.71
CNTNAP4Q9C0A0 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
CNTNAP4Q9C0A0 AL138785.1-201ENST00000425821 331 ntBASIC4.38□□□□□ -1.71
CNTNAP4Q9C0A0 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC4.38□□□□□ -1.71
CNTNAP4Q9C0A0 EIF1P2-201ENST00000428233 350 ntBASIC4.38□□□□□ -1.71
CNTNAP4Q9C0A0 AC092573.2-201ENST00000434546 243 ntBASIC4.38□□□□□ -1.71
CNTNAP4Q9C0A0 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CNTNAP4Q9C0A0 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.38□□□□□ -1.71
CNTNAP4Q9C0A0 Vault.1-201ENST00000516474 102 ntBASIC4.38□□□□□ -1.71
CNTNAP4Q9C0A0 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC4.38□□□□□ -1.71
CNTNAP4Q9C0A0 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC4.38□□□□□ -1.71
CNTNAP4Q9C0A0 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC4.38□□□□□ -1.71
CNTNAP4Q9C0A0 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CNTNAP4Q9C0A0 AC087190.4-201ENST00000574616 8334 ntBASIC4.38□□□□□ -1.71
CNTNAP4Q9C0A0 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CNTNAP4Q9C0A0 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
CNTNAP4Q9C0A0 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
CNTNAP4Q9C0A0 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CNTNAP4Q9C0A0 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CNTNAP4Q9C0A0 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CNTNAP4Q9C0A0 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CNTNAP4Q9C0A0 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CNTNAP4Q9C0A0 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
CNTNAP4Q9C0A0 DEFB108F-201ENST00000344638 222 ntBASIC4.37□□□□□ -1.71
CNTNAP4Q9C0A0 Y_RNA.84-201ENST00000363011 104 ntBASIC4.37□□□□□ -1.71
CNTNAP4Q9C0A0 SNORD81.1-201ENST00000363064 77 ntBASIC4.37□□□□□ -1.71
CNTNAP4Q9C0A0 RNU6-1167P-201ENST00000363227 94 ntBASIC4.37□□□□□ -1.71
CNTNAP4Q9C0A0 RNU6-493P-201ENST00000391321 108 ntBASIC4.37□□□□□ -1.71
CNTNAP4Q9C0A0 SNORD56-201ENST00000413522 71 ntBASIC4.37□□□□□ -1.71
CNTNAP4Q9C0A0 MTCO1P39-201ENST00000426148 480 ntBASIC4.37□□□□□ -1.71
CNTNAP4Q9C0A0 SETP5-201ENST00000437270 562 ntBASIC4.37□□□□□ -1.71
CNTNAP4Q9C0A0 AC006028.1-201ENST00000438379 402 ntBASIC4.37□□□□□ -1.71
CNTNAP4Q9C0A0 RNU4-71P-201ENST00000516258 113 ntBASIC4.37□□□□□ -1.71
CNTNAP4Q9C0A0 RNU4-60P-201ENST00000517239 135 ntBASIC4.37□□□□□ -1.71
CNTNAP4Q9C0A0 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC4.37□□□□□ -1.71
CNTNAP4Q9C0A0 AMZ2P1-203ENST00000565833 850 ntBASIC4.37□□□□□ -1.71
CNTNAP4Q9C0A0 KLKP1-201ENST00000595979 403 ntBASIC4.37□□□□□ -1.71
CNTNAP4Q9C0A0 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
CNTNAP4Q9C0A0 NEAT1-202ENST00000501122 22743 ntBASIC4.37□□□□□ -1.71
CNTNAP4Q9C0A0 AC116096.1-201ENST00000566804 2314 ntBASIC4.36□□□□□ -1.71
CNTNAP4Q9C0A0 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CNTNAP4Q9C0A0 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
CNTNAP4Q9C0A0 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.36□□□□□ -1.71
CNTNAP4Q9C0A0 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC4.36□□□□□ -1.71
CNTNAP4Q9C0A0 AL391987.6-201ENST00000305671 199 ntBASIC4.36□□□□□ -1.71
CNTNAP4Q9C0A0 RNU5A-1-201ENST00000362698 116 ntBASIC4.36□□□□□ -1.71
CNTNAP4Q9C0A0 RNU6-173P-201ENST00000364215 104 ntBASIC4.36□□□□□ -1.71
CNTNAP4Q9C0A0 RNA5SP42-201ENST00000364278 115 ntBASIC4.36□□□□□ -1.71
CNTNAP4Q9C0A0 MIR521-1-201ENST00000384902 87 ntBASIC4.36□□□□□ -1.71
CNTNAP4Q9C0A0 AL451074.5-201ENST00000415894 435 ntBASIC4.36□□□□□ -1.71
CNTNAP4Q9C0A0 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC4.36□□□□□ -1.71
CNTNAP4Q9C0A0 AL138752.1-201ENST00000452964 351 ntBASIC4.36□□□□□ -1.71
CNTNAP4Q9C0A0 AC006445.1-201ENST00000491925 405 ntBASIC4.36□□□□□ -1.71
CNTNAP4Q9C0A0 AC067942.3-201ENST00000512025 362 ntBASIC4.36□□□□□ -1.71
CNTNAP4Q9C0A0 RNA5SP341-201ENST00000516261 117 ntBASIC4.36□□□□□ -1.71
CNTNAP4Q9C0A0 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC4.36□□□□□ -1.71
CNTNAP4Q9C0A0 AC084851.1-201ENST00000529105 249 ntBASIC4.36□□□□□ -1.71
CNTNAP4Q9C0A0 AL590705.4-201ENST00000532209 134 ntBASIC4.36□□□□□ -1.71
CNTNAP4Q9C0A0 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC4.36□□□□□ -1.71
CNTNAP4Q9C0A0 LARP7P3-201ENST00000579888 337 ntBASIC4.36□□□□□ -1.71
CNTNAP4Q9C0A0 AC010620.2-201ENST00000600135 313 ntBASIC4.36□□□□□ -1.71
CNTNAP4Q9C0A0 AC006557.5-201ENST00000603126 811 ntBASIC4.36□□□□□ -1.71
CNTNAP4Q9C0A0 AC098826.3-201ENST00000603823 466 ntBASIC4.36□□□□□ -1.71
CNTNAP4Q9C0A0 AL645944.1-201ENST00000603857 493 ntBASIC4.36□□□□□ -1.71
CNTNAP4Q9C0A0 AC123912.5-201ENST00000605470 343 ntBASIC4.36□□□□□ -1.71
CNTNAP4Q9C0A0 BX284668.6-201ENST00000606899 438 ntBASIC4.36□□□□□ -1.71
CNTNAP4Q9C0A0 AC015813.4-201ENST00000610469 179 ntBASIC4.36□□□□□ -1.71
CNTNAP4Q9C0A0 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC4.36□□□□□ -1.71
CNTNAP4Q9C0A0 AP001282.2-201ENST00000616149 309 ntBASIC4.36□□□□□ -1.71
CNTNAP4Q9C0A0 OTUD4P1-201ENST00000237841 3067 ntBASIC4.36□□□□□ -1.71
CNTNAP4Q9C0A0 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
CNTNAP4Q9C0A0 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
CNTNAP4Q9C0A0 RNU6-545P-201ENST00000362681 104 ntBASIC4.35□□□□□ -1.71
CNTNAP4Q9C0A0 RNU6-280P-201ENST00000364145 104 ntBASIC4.35□□□□□ -1.71
CNTNAP4Q9C0A0 RNU6-512P-201ENST00000364438 103 ntBASIC4.35□□□□□ -1.71
CNTNAP4Q9C0A0 SNORD50B-201ENST00000364995 70 ntBASIC4.35□□□□□ -1.71
CNTNAP4Q9C0A0 RNU6-1074P-201ENST00000383995 104 ntBASIC4.35□□□□□ -1.71
CNTNAP4Q9C0A0 Y_RNA.458-201ENST00000384240 102 ntBASIC4.35□□□□□ -1.71
CNTNAP4Q9C0A0 SNORD115-46-201ENST00000390982 71 ntBASIC4.35□□□□□ -1.71
CNTNAP4Q9C0A0 RNU4-47P-201ENST00000410876 114 ntBASIC4.35□□□□□ -1.71
CNTNAP4Q9C0A0 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC4.35□□□□□ -1.71
CNTNAP4Q9C0A0 EI24P1-201ENST00000416584 867 ntBASIC4.35□□□□□ -1.71
CNTNAP4Q9C0A0 TOMM20P4-201ENST00000427861 435 ntBASIC4.35□□□□□ -1.71
CNTNAP4Q9C0A0 MTCO3P29-201ENST00000432119 779 ntBASIC4.35□□□□□ -1.71
CNTNAP4Q9C0A0 TMSB4XP3-201ENST00000445144 114 ntBASIC4.35□□□□□ -1.71
CNTNAP4Q9C0A0 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC4.35□□□□□ -1.71
CNTNAP4Q9C0A0 ANP32BP2-201ENST00000454525 545 ntBASIC4.35□□□□□ -1.71
CNTNAP4Q9C0A0 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC4.35□□□□□ -1.71
CNTNAP4Q9C0A0 AC025445.1-201ENST00000502728 300 ntBASIC4.35□□□□□ -1.71
CNTNAP4Q9C0A0 AC097462.2-201ENST00000504623 481 ntBASIC4.35□□□□□ -1.71
CNTNAP4Q9C0A0 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC4.35□□□□□ -1.71
CNTNAP4Q9C0A0 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC4.35□□□□□ -1.71
CNTNAP4Q9C0A0 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms