Protein–RNA interactions for Protein: Q99626

CDX2, Homeobox protein CDX-2, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2Q99626 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC1.78□□□□□ -2.12
CDX2Q99626 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
CDX2Q99626 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.78□□□□□ -2.12
CDX2Q99626 AL161670.1-201ENST00000554348 137 ntBASIC1.78□□□□□ -2.12
CDX2Q99626 RPL21P5-201ENST00000554662 472 ntBASIC1.78□□□□□ -2.12
CDX2Q99626 AC091489.2-201ENST00000566263 604 ntBASIC1.78□□□□□ -2.12
CDX2Q99626 AC002400.1-201ENST00000569310 726 ntBASIC1.78□□□□□ -2.12
CDX2Q99626 AC073544.2-201ENST00000601155 540 ntBASIC1.78□□□□□ -2.12
CDX2Q99626 CLPTM1LP1-201ENST00000604519 484 ntBASIC1.78□□□□□ -2.12
CDX2Q99626 AP000860.1-201ENST00000605250 559 ntBASIC1.78□□□□□ -2.12
CDX2Q99626 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC1.78□□□□□ -2.12
CDX2Q99626 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC1.78□□□□□ -2.12
CDX2Q99626 MIR6134-201ENST00000617606 109 ntBASIC1.78□□□□□ -2.12
CDX2Q99626 AC025048.6-202ENST00000627667 438 ntBASIC1.78□□□□□ -2.12
CDX2Q99626 MTND5P42-201ENST00000637720 498 ntBASIC1.78□□□□□ -2.12
CDX2Q99626 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
CDX2Q99626 MTND4P1-201ENST00000457501 1466 ntBASIC1.77□□□□□ -2.13
CDX2Q99626 AC092104.1-201ENST00000497346 1441 ntBASIC1.77□□□□□ -2.13
CDX2Q99626 ZNF209P-201ENST00000593450 2304 ntBASIC1.77□□□□□ -2.13
CDX2Q99626 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
CDX2Q99626 Y_RNA.30-201ENST00000362572 97 ntBASIC1.77□□□□□ -2.13
CDX2Q99626 RNU4-1-201ENST00000363925 141 ntBASIC1.77□□□□□ -2.13
CDX2Q99626 RNU6-553P-201ENST00000364047 96 ntBASIC1.77□□□□□ -2.13
CDX2Q99626 RNY3P13-201ENST00000365542 102 ntBASIC1.77□□□□□ -2.13
CDX2Q99626 RNU5E-6P-201ENST00000365574 115 ntBASIC1.77□□□□□ -2.13
CDX2Q99626 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC1.77□□□□□ -2.13
CDX2Q99626 MIR518D-201ENST00000385014 87 ntBASIC1.77□□□□□ -2.13
CDX2Q99626 AL049545.1-201ENST00000401856 572 ntBASIC1.77□□□□□ -2.13
CDX2Q99626 RNU6-174P-201ENST00000410406 106 ntBASIC1.77□□□□□ -2.13
CDX2Q99626 RNU2-40P-201ENST00000410833 196 ntBASIC1.77□□□□□ -2.13
CDX2Q99626 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC1.77□□□□□ -2.13
CDX2Q99626 AC098592.1-201ENST00000419352 333 ntBASIC1.77□□□□□ -2.13
CDX2Q99626 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.77□□□□□ -2.13
CDX2Q99626 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC1.77□□□□□ -2.13
CDX2Q99626 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC1.77□□□□□ -2.13
CDX2Q99626 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC1.77□□□□□ -2.13
CDX2Q99626 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC1.77□□□□□ -2.13
CDX2Q99626 NEFMP1-201ENST00000443423 1006 ntBASIC1.77□□□□□ -2.13
CDX2Q99626 EPS15P1-201ENST00000448836 336 ntBASIC1.77□□□□□ -2.13
CDX2Q99626 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC1.77□□□□□ -2.13
CDX2Q99626 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC1.77□□□□□ -2.13
CDX2Q99626 MTND1P12-201ENST00000455231 147 ntBASIC1.77□□□□□ -2.13
CDX2Q99626 TPTE2P5-203ENST00000458118 728 ntBASIC1.77□□□□□ -2.13
CDX2Q99626 DYNLL1P5-201ENST00000467158 270 ntBASIC1.77□□□□□ -2.13
CDX2Q99626 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC1.77□□□□□ -2.13
CDX2Q99626 AC023141.11-201ENST00000508864 202 ntBASIC1.77□□□□□ -2.13
CDX2Q99626 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC1.77□□□□□ -2.13
CDX2Q99626 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC1.77□□□□□ -2.13
CDX2Q99626 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC1.77□□□□□ -2.13
CDX2Q99626 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC1.77□□□□□ -2.13
CDX2Q99626 RNU6-1183P-201ENST00000517054 60 ntBASIC1.77□□□□□ -2.13
CDX2Q99626 RNU6-232P-201ENST00000517144 64 ntBASIC1.77□□□□□ -2.13
CDX2Q99626 CBX3P4-201ENST00000538909 354 ntBASIC1.77□□□□□ -2.13
CDX2Q99626 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC1.77□□□□□ -2.13
CDX2Q99626 AKIRIN1P1-201ENST00000547384 544 ntBASIC1.77□□□□□ -2.13
CDX2Q99626 ZNF519P3-201ENST00000557158 1032 ntBASIC1.77□□□□□ -2.13
CDX2Q99626 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC1.77□□□□□ -2.13
CDX2Q99626 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC1.77□□□□□ -2.13
CDX2Q99626 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC1.77□□□□□ -2.13
CDX2Q99626 AC012414.6-201ENST00000568241 401 ntBASIC1.77□□□□□ -2.13
CDX2Q99626 MIR3118-1-201ENST00000581787 76 ntBASIC1.77□□□□□ -2.13
CDX2Q99626 PIGPP4-201ENST00000584447 307 ntBASIC1.77□□□□□ -2.13
CDX2Q99626 AC121247.2-201ENST00000604776 136 ntBASIC1.77□□□□□ -2.13
CDX2Q99626 AL365204.3-201ENST00000612448 685 ntBASIC1.77□□□□□ -2.13
CDX2Q99626 AC090970.3-201ENST00000612566 866 ntBASIC1.77□□□□□ -2.13
CDX2Q99626 AC011939.3-201ENST00000613686 466 ntBASIC1.77□□□□□ -2.13
CDX2Q99626 AL161423.1-201ENST00000613700 262 ntBASIC1.77□□□□□ -2.13
CDX2Q99626 AL162373.1-201ENST00000620433 407 ntBASIC1.77□□□□□ -2.13
CDX2Q99626 MIR7157-201ENST00000635801 60 ntBASIC1.77□□□□□ -2.13
CDX2Q99626 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC1.76□□□□□ -2.13
CDX2Q99626 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC1.76□□□□□ -2.13
CDX2Q99626 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC1.76□□□□□ -2.13
CDX2Q99626 Y_RNA.51-201ENST00000362725 102 ntBASIC1.76□□□□□ -2.13
CDX2Q99626 Y_RNA.436-201ENST00000384097 102 ntBASIC1.76□□□□□ -2.13
CDX2Q99626 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
CDX2Q99626 RNU6-278P-201ENST00000390945 109 ntBASIC1.76□□□□□ -2.13
CDX2Q99626 CIR1P3-201ENST00000405137 479 ntBASIC1.76□□□□□ -2.13
CDX2Q99626 ELOCP17-201ENST00000414751 326 ntBASIC1.76□□□□□ -2.13
CDX2Q99626 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC1.76□□□□□ -2.13
CDX2Q99626 RAC1P6-201ENST00000423911 575 ntBASIC1.76□□□□□ -2.13
CDX2Q99626 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1.76□□□□□ -2.13
CDX2Q99626 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
CDX2Q99626 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC1.76□□□□□ -2.13
CDX2Q99626 AL591704.1-201ENST00000432574 275 ntBASIC1.76□□□□□ -2.13
CDX2Q99626 MTCO2P16-201ENST00000436962 677 ntBASIC1.76□□□□□ -2.13
CDX2Q99626 AC004383.1-201ENST00000438135 289 ntBASIC1.76□□□□□ -2.13
CDX2Q99626 AL354941.1-201ENST00000438600 464 ntBASIC1.76□□□□□ -2.13
CDX2Q99626 AL161651.1-201ENST00000440882 223 ntBASIC1.76□□□□□ -2.13
CDX2Q99626 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC1.76□□□□□ -2.13
CDX2Q99626 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC1.76□□□□□ -2.13
CDX2Q99626 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC1.76□□□□□ -2.13
CDX2Q99626 BZW1P2-201ENST00000473537 826 ntBASIC1.76□□□□□ -2.13
CDX2Q99626 MTND1P3-201ENST00000484956 952 ntBASIC1.76□□□□□ -2.13
CDX2Q99626 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC1.76□□□□□ -2.13
CDX2Q99626 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC1.76□□□□□ -2.13
CDX2Q99626 SCARNA3-201ENST00000517097 143 ntBASIC1.76□□□□□ -2.13
CDX2Q99626 RNU6-1223P-201ENST00000517124 104 ntBASIC1.76□□□□□ -2.13
CDX2Q99626 AC022616.6-201ENST00000520479 119 ntBASIC1.76□□□□□ -2.13
CDX2Q99626 AC010186.2-204ENST00000537668 439 ntBASIC1.76□□□□□ -2.13
CDX2Q99626 AC015720.1-201ENST00000565251 277 ntBASIC1.76□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 128.2 ms