Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 AC006445.1-201ENST00000491925 405 ntBASIC2.78□□□□□ -1.96
NR1H4Q96RI1 AC018437.1-201ENST00000492214 406 ntBASIC2.78□□□□□ -1.96
NR1H4Q96RI1 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC2.78□□□□□ -1.96
NR1H4Q96RI1 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.78□□□□□ -1.96
NR1H4Q96RI1 SNORA9.3-201ENST00000516383 129 ntBASIC2.78□□□□□ -1.96
NR1H4Q96RI1 SNORA31.23-201ENST00000517219 133 ntBASIC2.78□□□□□ -1.96
NR1H4Q96RI1 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.78□□□□□ -1.96
NR1H4Q96RI1 AC090136.1-201ENST00000520009 240 ntBASIC2.78□□□□□ -1.96
NR1H4Q96RI1 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC2.78□□□□□ -1.96
NR1H4Q96RI1 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.78□□□□□ -1.96
NR1H4Q96RI1 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC2.78□□□□□ -1.96
NR1H4Q96RI1 MIR3117-201ENST00000584034 78 ntBASIC2.78□□□□□ -1.96
NR1H4Q96RI1 MIR4276-201ENST00000584832 70 ntBASIC2.78□□□□□ -1.96
NR1H4Q96RI1 MIR3922-201ENST00000585192 84 ntBASIC2.78□□□□□ -1.96
NR1H4Q96RI1 MAPK10-266ENST00000641066 6555 ntBASIC2.78□□□□□ -1.96
NR1H4Q96RI1 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.77□□□□□ -1.97
NR1H4Q96RI1 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.77□□□□□ -1.97
NR1H4Q96RI1 MTND4P27-201ENST00000450813 1354 ntBASIC2.77□□□□□ -1.97
NR1H4Q96RI1 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
NR1H4Q96RI1 RNU6-105P-201ENST00000363909 104 ntBASIC2.77□□□□□ -1.97
NR1H4Q96RI1 Y_RNA.248-201ENST00000364501 109 ntBASIC2.77□□□□□ -1.97
NR1H4Q96RI1 RNU6-827P-201ENST00000365553 106 ntBASIC2.77□□□□□ -1.97
NR1H4Q96RI1 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
NR1H4Q96RI1 SET-203ENST00000372688 801 ntTSL 2 BASIC2.77□□□□□ -1.97
NR1H4Q96RI1 DEFA7P-201ENST00000382676 285 ntBASIC2.77□□□□□ -1.97
NR1H4Q96RI1 MIR218-1-201ENST00000384999 110 ntBASIC2.77□□□□□ -1.97
NR1H4Q96RI1 MIR450B-201ENST00000401182 78 ntBASIC2.77□□□□□ -1.97
NR1H4Q96RI1 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC2.77□□□□□ -1.97
NR1H4Q96RI1 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC2.77□□□□□ -1.97
NR1H4Q96RI1 AL359672.1-201ENST00000442302 409 ntBASIC2.77□□□□□ -1.97
NR1H4Q96RI1 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.77□□□□□ -1.97
NR1H4Q96RI1 RN7SL542P-201ENST00000467147 294 ntBASIC2.77□□□□□ -1.97
NR1H4Q96RI1 AP000852.1-201ENST00000472460 573 ntBASIC2.77□□□□□ -1.97
NR1H4Q96RI1 RPS29P25-201ENST00000481709 171 ntBASIC2.77□□□□□ -1.97
NR1H4Q96RI1 AC096576.1-201ENST00000489014 359 ntBASIC2.77□□□□□ -1.97
NR1H4Q96RI1 MTCYBP18-201ENST00000501056 747 ntBASIC2.77□□□□□ -1.97
NR1H4Q96RI1 AC023141.11-201ENST00000508864 202 ntBASIC2.77□□□□□ -1.97
NR1H4Q96RI1 SMURF2P1-201ENST00000514992 481 ntBASIC2.77□□□□□ -1.97
NR1H4Q96RI1 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC2.77□□□□□ -1.97
NR1H4Q96RI1 AC079598.5-201ENST00000547460 117 ntBASIC2.77□□□□□ -1.97
NR1H4Q96RI1 AC025423.5-201ENST00000550230 219 ntBASIC2.77□□□□□ -1.97
NR1H4Q96RI1 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC2.77□□□□□ -1.97
NR1H4Q96RI1 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC2.77□□□□□ -1.97
NR1H4Q96RI1 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC2.77□□□□□ -1.97
NR1H4Q96RI1 AC090897.2-201ENST00000581715 130 ntBASIC2.77□□□□□ -1.97
NR1H4Q96RI1 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC2.77□□□□□ -1.97
NR1H4Q96RI1 AL121917.1-203ENST00000605534 577 ntBASIC2.77□□□□□ -1.97
NR1H4Q96RI1 AC093913.1-201ENST00000614178 329 ntBASIC2.77□□□□□ -1.97
NR1H4Q96RI1 AC007792.1-201ENST00000623023 402 ntBASIC2.77□□□□□ -1.97
NR1H4Q96RI1 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.77□□□□□ -1.97
NR1H4Q96RI1 MIR6073-201ENST00000352083 89 ntBASIC2.76□□□□□ -1.97
NR1H4Q96RI1 RNA5SP393-201ENST00000363423 117 ntBASIC2.76□□□□□ -1.97
NR1H4Q96RI1 Y_RNA.167-201ENST00000363735 109 ntBASIC2.76□□□□□ -1.97
NR1H4Q96RI1 AL117339.3-201ENST00000418733 162 ntBASIC2.76□□□□□ -1.97
NR1H4Q96RI1 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC2.76□□□□□ -1.97
NR1H4Q96RI1 ATP6V0E1P4-201ENST00000427294 242 ntBASIC2.76□□□□□ -1.97
NR1H4Q96RI1 AC092427.1-202ENST00000430569 476 ntBASIC2.76□□□□□ -1.97
NR1H4Q96RI1 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC2.76□□□□□ -1.97
NR1H4Q96RI1 RPL7P12-201ENST00000446719 750 ntBASIC2.76□□□□□ -1.97
NR1H4Q96RI1 AL133547.1-201ENST00000448546 220 ntBASIC2.76□□□□□ -1.97
NR1H4Q96RI1 RBMY2UP-201ENST00000453474 324 ntBASIC2.76□□□□□ -1.97
NR1H4Q96RI1 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.76□□□□□ -1.97
NR1H4Q96RI1 RPL7P43-201ENST00000478876 753 ntBASIC2.76□□□□□ -1.97
NR1H4Q96RI1 RPS29P2-201ENST00000479278 136 ntBASIC2.76□□□□□ -1.97
NR1H4Q96RI1 AC008628.2-201ENST00000502605 298 ntBASIC2.76□□□□□ -1.97
NR1H4Q96RI1 SNORA25.11-201ENST00000515935 105 ntBASIC2.76□□□□□ -1.97
NR1H4Q96RI1 CKS1BP7-201ENST00000522230 235 ntBASIC2.76□□□□□ -1.97
NR1H4Q96RI1 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC2.76□□□□□ -1.97
NR1H4Q96RI1 AC060766.3-201ENST00000591442 263 ntBASIC2.76□□□□□ -1.97
NR1H4Q96RI1 AC073410.2-201ENST00000603240 332 ntBASIC2.76□□□□□ -1.97
NR1H4Q96RI1 AL356280.1-201ENST00000603614 379 ntBASIC2.76□□□□□ -1.97
NR1H4Q96RI1 AC069294.1-201ENST00000608397 350 ntBASIC2.76□□□□□ -1.97
NR1H4Q96RI1 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.76□□□□□ -1.97
NR1H4Q96RI1 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.76□□□□□ -1.97
NR1H4Q96RI1 AC002543.1-201ENST00000299783 1954 ntBASIC2.76□□□□□ -1.97
NR1H4Q96RI1 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.76□□□□□ -1.97
NR1H4Q96RI1 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
NR1H4Q96RI1 RNU6-1010P-201ENST00000362757 107 ntBASIC2.75□□□□□ -1.97
NR1H4Q96RI1 U3.12-201ENST00000364498 214 ntBASIC2.75□□□□□ -1.97
NR1H4Q96RI1 RNU6-128P-201ENST00000383976 107 ntBASIC2.75□□□□□ -1.97
NR1H4Q96RI1 RNU6-622P-201ENST00000384272 103 ntBASIC2.75□□□□□ -1.97
NR1H4Q96RI1 AL445529.1-201ENST00000398713 389 ntBASIC2.75□□□□□ -1.97
NR1H4Q96RI1 AL162578.1-201ENST00000406202 378 ntBASIC2.75□□□□□ -1.97
NR1H4Q96RI1 RNU6-1328P-201ENST00000410938 106 ntBASIC2.75□□□□□ -1.97
NR1H4Q96RI1 RNU6-293P-201ENST00000411259 106 ntBASIC2.75□□□□□ -1.97
NR1H4Q96RI1 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC2.75□□□□□ -1.97
NR1H4Q96RI1 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.75□□□□□ -1.97
NR1H4Q96RI1 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.75□□□□□ -1.97
NR1H4Q96RI1 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC2.75□□□□□ -1.97
NR1H4Q96RI1 MRPL50P4-201ENST00000446432 475 ntBASIC2.75□□□□□ -1.97
NR1H4Q96RI1 snoU13.22-201ENST00000459428 104 ntBASIC2.75□□□□□ -1.97
NR1H4Q96RI1 RN7SKP40-201ENST00000517211 242 ntBASIC2.75□□□□□ -1.97
NR1H4Q96RI1 AC109329.1-201ENST00000518744 317 ntBASIC2.75□□□□□ -1.97
NR1H4Q96RI1 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.75□□□□□ -1.97
NR1H4Q96RI1 AC105245.1-201ENST00000581934 244 ntBASIC2.75□□□□□ -1.97
NR1H4Q96RI1 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC2.75□□□□□ -1.97
NR1H4Q96RI1 BNIP3P16-201ENST00000589779 534 ntBASIC2.75□□□□□ -1.97
NR1H4Q96RI1 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.75□□□□□ -1.97
NR1H4Q96RI1 AC073657.2-201ENST00000605661 303 ntBASIC2.75□□□□□ -1.97
NR1H4Q96RI1 AL449363.1-201ENST00000617815 186 ntBASIC2.75□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 178.8 ms