Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 RNU6-487P-201ENST00000365430 104 ntBASIC1.92□□□□□ -2.1
RPRD1AQ96P16 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
RPRD1AQ96P16 MIR504-201ENST00000385065 83 ntBASIC1.92□□□□□ -2.1
RPRD1AQ96P16 RNU2-39P-201ENST00000410604 198 ntBASIC1.92□□□□□ -2.1
RPRD1AQ96P16 EEF1A1P40-201ENST00000412883 573 ntBASIC1.92□□□□□ -2.1
RPRD1AQ96P16 XKRYP1-201ENST00000423438 492 ntBASIC1.92□□□□□ -2.1
RPRD1AQ96P16 XKRYP2-201ENST00000432915 492 ntBASIC1.92□□□□□ -2.1
RPRD1AQ96P16 AL360271.2-201ENST00000447710 161 ntBASIC1.92□□□□□ -2.1
RPRD1AQ96P16 FDX1P2-201ENST00000450769 375 ntBASIC1.92□□□□□ -2.1
RPRD1AQ96P16 snoU109.1-201ENST00000459339 135 ntBASIC1.92□□□□□ -2.1
RPRD1AQ96P16 RAP1BP2-201ENST00000478270 544 ntBASIC1.92□□□□□ -2.1
RPRD1AQ96P16 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC1.92□□□□□ -2.1
RPRD1AQ96P16 AC005178.1-201ENST00000508392 440 ntBASIC1.92□□□□□ -2.1
RPRD1AQ96P16 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC1.92□□□□□ -2.1
RPRD1AQ96P16 RNU6-1129P-201ENST00000515964 104 ntBASIC1.92□□□□□ -2.1
RPRD1AQ96P16 Y_RNA.672-201ENST00000516289 104 ntBASIC1.92□□□□□ -2.1
RPRD1AQ96P16 RNU6-295P-201ENST00000516901 104 ntBASIC1.92□□□□□ -2.1
RPRD1AQ96P16 SNORA31.23-201ENST00000517219 133 ntBASIC1.92□□□□□ -2.1
RPRD1AQ96P16 RNU6-586P-201ENST00000517265 104 ntBASIC1.92□□□□□ -2.1
RPRD1AQ96P16 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC1.92□□□□□ -2.1
RPRD1AQ96P16 AC022616.3-201ENST00000523940 148 ntBASIC1.92□□□□□ -2.1
RPRD1AQ96P16 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.92□□□□□ -2.1
RPRD1AQ96P16 CR383656.8-201ENST00000549046 145 ntBASIC1.92□□□□□ -2.1
RPRD1AQ96P16 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC1.92□□□□□ -2.1
RPRD1AQ96P16 AC009094.1-201ENST00000564443 426 ntBASIC1.92□□□□□ -2.1
RPRD1AQ96P16 AL022161.1-201ENST00000604390 213 ntBASIC1.92□□□□□ -2.1
RPRD1AQ96P16 ELOCP5-201ENST00000604924 333 ntBASIC1.92□□□□□ -2.1
RPRD1AQ96P16 uc_338.15-201ENST00000615470 191 ntBASIC1.92□□□□□ -2.1
RPRD1AQ96P16 U6.42-201ENST00000618440 107 ntBASIC1.92□□□□□ -2.1
RPRD1AQ96P16 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.92□□□□□ -2.1
RPRD1AQ96P16 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC1.92□□□□□ -2.1
RPRD1AQ96P16 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC1.92□□□□□ -2.1
RPRD1AQ96P16 Y_RNA.40-201ENST00000362645 93 ntBASIC1.91□□□□□ -2.1
RPRD1AQ96P16 RNU6-234P-201ENST00000365229 104 ntBASIC1.91□□□□□ -2.1
RPRD1AQ96P16 RNU6-61P-201ENST00000365528 109 ntBASIC1.91□□□□□ -2.1
RPRD1AQ96P16 RNU6-641P-201ENST00000384006 107 ntBASIC1.91□□□□□ -2.1
RPRD1AQ96P16 SNORD116-20-201ENST00000384529 92 ntBASIC1.91□□□□□ -2.1
RPRD1AQ96P16 SNORA40.19-201ENST00000390846 128 ntBASIC1.91□□□□□ -2.1
RPRD1AQ96P16 RPL23AP32-201ENST00000395315 459 ntBASIC1.91□□□□□ -2.1
RPRD1AQ96P16 RPS3AP36-201ENST00000398190 775 ntBASIC1.91□□□□□ -2.1
RPRD1AQ96P16 HIGD1AP15-201ENST00000416198 280 ntBASIC1.91□□□□□ -2.1
RPRD1AQ96P16 AC096920.1-201ENST00000423991 241 ntBASIC1.91□□□□□ -2.1
RPRD1AQ96P16 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC1.91□□□□□ -2.1
RPRD1AQ96P16 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC1.91□□□□□ -2.1
RPRD1AQ96P16 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC1.91□□□□□ -2.1
RPRD1AQ96P16 TAF9P1-201ENST00000445421 515 ntBASIC1.91□□□□□ -2.1
RPRD1AQ96P16 AC012308.1-201ENST00000451232 178 ntBASIC1.91□□□□□ -2.1
RPRD1AQ96P16 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC1.91□□□□□ -2.1
RPRD1AQ96P16 TAF9P2-201ENST00000454958 515 ntBASIC1.91□□□□□ -2.1
RPRD1AQ96P16 HMGB1P35-201ENST00000503360 598 ntBASIC1.91□□□□□ -2.1
RPRD1AQ96P16 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC1.91□□□□□ -2.1
RPRD1AQ96P16 AC117522.1-201ENST00000509821 380 ntBASIC1.91□□□□□ -2.1
RPRD1AQ96P16 NDUFA5P6-201ENST00000542110 379 ntBASIC1.91□□□□□ -2.1
RPRD1AQ96P16 RPL21P5-201ENST00000554662 472 ntBASIC1.91□□□□□ -2.1
RPRD1AQ96P16 MIR4299-201ENST00000577899 72 ntBASIC1.91□□□□□ -2.1
RPRD1AQ96P16 AC008521.1-201ENST00000587471 187 ntBASIC1.91□□□□□ -2.1
RPRD1AQ96P16 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
RPRD1AQ96P16 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC1.91□□□□□ -2.1
RPRD1AQ96P16 AC022022.2-201ENST00000602989 360 ntBASIC1.91□□□□□ -2.1
RPRD1AQ96P16 DUXAP9-208ENST00000622815 614 ntBASIC1.91□□□□□ -2.1
RPRD1AQ96P16 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.91□□□□□ -2.1
RPRD1AQ96P16 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC1.9□□□□□ -2.11
RPRD1AQ96P16 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
RPRD1AQ96P16 RNA5SP276-201ENST00000362580 94 ntBASIC1.9□□□□□ -2.11
RPRD1AQ96P16 RNU6-529P-201ENST00000363383 104 ntBASIC1.9□□□□□ -2.11
RPRD1AQ96P16 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
RPRD1AQ96P16 RNA5SP450-201ENST00000411206 102 ntBASIC1.9□□□□□ -2.11
RPRD1AQ96P16 RPL31P63-201ENST00000422565 375 ntBASIC1.9□□□□□ -2.11
RPRD1AQ96P16 CALM2P2-201ENST00000428512 440 ntBASIC1.9□□□□□ -2.11
RPRD1AQ96P16 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC1.9□□□□□ -2.11
RPRD1AQ96P16 KATNBL1P6-201ENST00000453433 915 ntBASIC1.9□□□□□ -2.11
RPRD1AQ96P16 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.9□□□□□ -2.11
RPRD1AQ96P16 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC1.9□□□□□ -2.11
RPRD1AQ96P16 RPL23AP63-201ENST00000498752 471 ntBASIC1.9□□□□□ -2.11
RPRD1AQ96P16 AC109329.1-201ENST00000518744 317 ntBASIC1.9□□□□□ -2.11
RPRD1AQ96P16 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.9□□□□□ -2.11
RPRD1AQ96P16 AC011494.1-201ENST00000596454 237 ntBASIC1.9□□□□□ -2.11
RPRD1AQ96P16 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC1.9□□□□□ -2.11
RPRD1AQ96P16 AC091304.9-201ENST00000612091 226 ntBASIC1.9□□□□□ -2.11
RPRD1AQ96P16 MIR6845-201ENST00000613182 61 ntBASIC1.9□□□□□ -2.11
RPRD1AQ96P16 MIR7843-201ENST00000622274 79 ntBASIC1.9□□□□□ -2.11
RPRD1AQ96P16 SCARNA4-202ENST00000625402 129 ntBASIC1.9□□□□□ -2.11
RPRD1AQ96P16 AC002543.1-201ENST00000299783 1954 ntBASIC1.9□□□□□ -2.11
RPRD1AQ96P16 ZNF702P-202ENST00000434269 1966 ntBASIC1.9□□□□□ -2.11
RPRD1AQ96P16 RNU6-1274P-201ENST00000384557 107 ntBASIC1.89□□□□□ -2.11
RPRD1AQ96P16 MIR518A2-201ENST00000384966 87 ntBASIC1.89□□□□□ -2.11
RPRD1AQ96P16 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
RPRD1AQ96P16 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
RPRD1AQ96P16 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC1.89□□□□□ -2.11
RPRD1AQ96P16 AL158823.1-201ENST00000418441 478 ntBASIC1.89□□□□□ -2.11
RPRD1AQ96P16 AC010099.3-201ENST00000423896 409 ntBASIC1.89□□□□□ -2.11
RPRD1AQ96P16 MTCO3P5-201ENST00000433620 714 ntBASIC1.89□□□□□ -2.11
RPRD1AQ96P16 UBE2D3P4-201ENST00000441973 436 ntBASIC1.89□□□□□ -2.11
RPRD1AQ96P16 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC1.89□□□□□ -2.11
RPRD1AQ96P16 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.89□□□□□ -2.11
RPRD1AQ96P16 AL121594.1-201ENST00000475906 575 ntBASIC1.89□□□□□ -2.11
RPRD1AQ96P16 RN7SL274P-201ENST00000492268 272 ntBASIC1.89□□□□□ -2.11
RPRD1AQ96P16 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC1.89□□□□□ -2.11
RPRD1AQ96P16 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC1.89□□□□□ -2.11
RPRD1AQ96P16 RNU1-86P-201ENST00000516108 154 ntBASIC1.89□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 86.2 ms