Protein–RNA interactions for Protein: Q96M42

LINC00479, Putative uncharacterized protein encoded by LINC00479, humanhuman

Predictions only

Length 142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00479Q96M42 AL160281.1-201ENST00000605307 311 ntBASIC2.38□□□□□ -2.03
LINC00479Q96M42 MIR3976-201ENST00000606807 139 ntBASIC2.38□□□□□ -2.03
LINC00479Q96M42 AC019193.3-201ENST00000609144 554 ntBASIC2.38□□□□□ -2.03
LINC00479Q96M42 AC006023.2-201ENST00000609916 167 ntBASIC2.38□□□□□ -2.03
LINC00479Q96M42 AL121772.2-201ENST00000614331 297 ntBASIC2.38□□□□□ -2.03
LINC00479Q96M42 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC2.38□□□□□ -2.03
LINC00479Q96M42 U6.99-201ENST00000637524 83 ntBASIC2.38□□□□□ -2.03
LINC00479Q96M42 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
LINC00479Q96M42 AC009093.8-201ENST00000641769 292 ntBASIC2.38□□□□□ -2.03
LINC00479Q96M42 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
LINC00479Q96M42 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC2.38□□□□□ -2.03
LINC00479Q96M42 AL161431.1-201ENST00000618966 4205 ntBASIC2.37□□□□□ -2.03
LINC00479Q96M42 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC2.37□□□□□ -2.03
LINC00479Q96M42 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC2.37□□□□□ -2.03
LINC00479Q96M42 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.37□□□□□ -2.03
LINC00479Q96M42 RNU6-827P-201ENST00000365553 106 ntBASIC2.37□□□□□ -2.03
LINC00479Q96M42 Y_RNA.445-201ENST00000384168 102 ntBASIC2.37□□□□□ -2.03
LINC00479Q96M42 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
LINC00479Q96M42 PTMAP2-201ENST00000397627 327 ntBASIC2.37□□□□□ -2.03
LINC00479Q96M42 EIF4EBP2P3-201ENST00000403144 334 ntBASIC2.37□□□□□ -2.03
LINC00479Q96M42 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
LINC00479Q96M42 AC243428.1-201ENST00000421099 264 ntBASIC2.37□□□□□ -2.03
LINC00479Q96M42 AC098614.2-201ENST00000426040 255 ntBASIC2.37□□□□□ -2.03
LINC00479Q96M42 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.37□□□□□ -2.03
LINC00479Q96M42 AC098831.1-201ENST00000440661 216 ntBASIC2.37□□□□□ -2.03
LINC00479Q96M42 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.37□□□□□ -2.03
LINC00479Q96M42 AL078601.1-201ENST00000444542 271 ntBASIC2.37□□□□□ -2.03
LINC00479Q96M42 HIGD1AP2-201ENST00000446367 280 ntBASIC2.37□□□□□ -2.03
LINC00479Q96M42 AL031274.1-201ENST00000450334 232 ntBASIC2.37□□□□□ -2.03
LINC00479Q96M42 Y_RNA.631-201ENST00000459607 101 ntBASIC2.37□□□□□ -2.03
LINC00479Q96M42 AC106707.2-201ENST00000484182 374 ntBASIC2.37□□□□□ -2.03
LINC00479Q96M42 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC2.37□□□□□ -2.03
LINC00479Q96M42 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC2.37□□□□□ -2.03
LINC00479Q96M42 SCARNA16.2-201ENST00000516520 172 ntBASIC2.37□□□□□ -2.03
LINC00479Q96M42 Y_RNA.687-201ENST00000516558 91 ntBASIC2.37□□□□□ -2.03
LINC00479Q96M42 Y_RNA.708-201ENST00000516950 96 ntBASIC2.37□□□□□ -2.03
LINC00479Q96M42 RNU6-1183P-201ENST00000517054 60 ntBASIC2.37□□□□□ -2.03
LINC00479Q96M42 RNU6-1137P-201ENST00000517073 99 ntBASIC2.37□□□□□ -2.03
LINC00479Q96M42 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC2.37□□□□□ -2.03
LINC00479Q96M42 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC2.37□□□□□ -2.03
LINC00479Q96M42 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC2.37□□□□□ -2.03
LINC00479Q96M42 MIR4276-201ENST00000584832 70 ntBASIC2.37□□□□□ -2.03
LINC00479Q96M42 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
LINC00479Q96M42 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.37□□□□□ -2.03
LINC00479Q96M42 AL360085.1-201ENST00000604713 532 ntBASIC2.37□□□□□ -2.03
LINC00479Q96M42 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.37□□□□□ -2.03
LINC00479Q96M42 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
LINC00479Q96M42 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
LINC00479Q96M42 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
LINC00479Q96M42 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
LINC00479Q96M42 ZNF807-201ENST00000328088 1707 ntBASIC2.37□□□□□ -2.03
LINC00479Q96M42 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
LINC00479Q96M42 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.36□□□□□ -2.03
LINC00479Q96M42 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC2.36□□□□□ -2.03
LINC00479Q96M42 MTND4P27-201ENST00000450813 1354 ntBASIC2.36□□□□□ -2.03
LINC00479Q96M42 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.36□□□□□ -2.03
LINC00479Q96M42 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
LINC00479Q96M42 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.36□□□□□ -2.03
LINC00479Q96M42 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC2.36□□□□□ -2.03
LINC00479Q96M42 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.36□□□□□ -2.03
LINC00479Q96M42 Y_RNA.2-201ENST00000362330 96 ntBASIC2.36□□□□□ -2.03
LINC00479Q96M42 RNU6-1317P-201ENST00000364582 104 ntBASIC2.36□□□□□ -2.03
LINC00479Q96M42 IARS-201ENST00000375627 697 ntTSL 3 BASIC2.36□□□□□ -2.03
LINC00479Q96M42 RNU6-658P-201ENST00000384606 106 ntBASIC2.36□□□□□ -2.03
LINC00479Q96M42 MIR518D-201ENST00000385014 87 ntBASIC2.36□□□□□ -2.03
LINC00479Q96M42 MIR181B1-201ENST00000385240 110 ntBASIC2.36□□□□□ -2.03
LINC00479Q96M42 AL591034.1-201ENST00000407447 340 ntBASIC2.36□□□□□ -2.03
LINC00479Q96M42 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.36□□□□□ -2.03
LINC00479Q96M42 ATP6V0E1P4-201ENST00000427294 242 ntBASIC2.36□□□□□ -2.03
LINC00479Q96M42 AL160004.2-201ENST00000432935 350 ntBASIC2.36□□□□□ -2.03
LINC00479Q96M42 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC2.36□□□□□ -2.03
LINC00479Q96M42 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC2.36□□□□□ -2.03
LINC00479Q96M42 HMGN2P20-201ENST00000437531 273 ntBASIC2.36□□□□□ -2.03
LINC00479Q96M42 RN7SL20P-201ENST00000488827 297 ntBASIC2.36□□□□□ -2.03
LINC00479Q96M42 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
LINC00479Q96M42 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC2.36□□□□□ -2.03
LINC00479Q96M42 HIGD1AP1-201ENST00000550979 275 ntBASIC2.36□□□□□ -2.03
LINC00479Q96M42 AL442663.2-201ENST00000554385 511 ntBASIC2.36□□□□□ -2.03
LINC00479Q96M42 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC2.36□□□□□ -2.03
LINC00479Q96M42 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC2.36□□□□□ -2.03
LINC00479Q96M42 PISRT1.1-201ENST00000616930 107 ntBASIC2.36□□□□□ -2.03
LINC00479Q96M42 USP12-203ENST00000620323 349 ntTSL 3 BASIC2.36□□□□□ -2.03
LINC00479Q96M42 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.36□□□□□ -2.03
LINC00479Q96M42 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
LINC00479Q96M42 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC2.36□□□□□ -2.03
LINC00479Q96M42 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
LINC00479Q96M42 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC2.35□□□□□ -2.03
LINC00479Q96M42 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.35□□□□□ -2.03
LINC00479Q96M42 MTND4P1-201ENST00000457501 1466 ntBASIC2.35□□□□□ -2.03
LINC00479Q96M42 RNA5SP124-201ENST00000362739 110 ntBASIC2.35□□□□□ -2.03
LINC00479Q96M42 SNORA63C-201ENST00000364578 129 ntBASIC2.35□□□□□ -2.03
LINC00479Q96M42 RNU6-593P-201ENST00000364716 112 ntBASIC2.35□□□□□ -2.03
LINC00479Q96M42 RNU6-898P-201ENST00000365627 104 ntBASIC2.35□□□□□ -2.03
LINC00479Q96M42 RNU1-73P-201ENST00000383971 164 ntBASIC2.35□□□□□ -2.03
LINC00479Q96M42 Y_RNA.496-201ENST00000384444 101 ntBASIC2.35□□□□□ -2.03
LINC00479Q96M42 MIR23B-201ENST00000384832 97 ntBASIC2.35□□□□□ -2.03
LINC00479Q96M42 MIR134-201ENST00000385258 73 ntBASIC2.35□□□□□ -2.03
LINC00479Q96M42 SNORA48.7-201ENST00000391302 135 ntBASIC2.35□□□□□ -2.03
LINC00479Q96M42 PVALB-202ENST00000404171 422 ntTSL 2 BASIC2.35□□□□□ -2.03
LINC00479Q96M42 RNA5SP274-201ENST00000410484 108 ntBASIC2.35□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 126.6 ms