Protein–RNA interactions for Protein: Q96M19

LINC00477, Putative transmembrane protein encoded by LINC00477, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00477Q96M19 RN7SKP298-201ENST00000515950 94 ntBASIC1.68□□□□□ -2.14
LINC00477Q96M19 MIR892C-201ENST00000516410 77 ntBASIC1.68□□□□□ -2.14
LINC00477Q96M19 RN7SKP219-201ENST00000516825 296 ntBASIC1.68□□□□□ -2.14
LINC00477Q96M19 Y_RNA.704-201ENST00000516851 102 ntBASIC1.68□□□□□ -2.14
LINC00477Q96M19 AL121821.2-201ENST00000556081 394 ntBASIC1.68□□□□□ -2.14
LINC00477Q96M19 AL118558.2-201ENST00000556294 238 ntBASIC1.68□□□□□ -2.14
LINC00477Q96M19 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC1.68□□□□□ -2.14
LINC00477Q96M19 MTCYBP33-201ENST00000575007 1130 ntBASIC1.68□□□□□ -2.14
LINC00477Q96M19 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC1.68□□□□□ -2.14
LINC00477Q96M19 MIR4703-201ENST00000577728 79 ntBASIC1.68□□□□□ -2.14
LINC00477Q96M19 MIR1273C-201ENST00000578669 77 ntBASIC1.68□□□□□ -2.14
LINC00477Q96M19 MIR4448-201ENST00000584360 86 ntBASIC1.68□□□□□ -2.14
LINC00477Q96M19 AC091152.3-201ENST00000604227 325 ntBASIC1.68□□□□□ -2.14
LINC00477Q96M19 APOOP1-201ENST00000604695 592 ntBASIC1.68□□□□□ -2.14
LINC00477Q96M19 AC064807.4-201ENST00000607201 407 ntBASIC1.68□□□□□ -2.14
LINC00477Q96M19 AC007684.1-201ENST00000609671 477 ntBASIC1.68□□□□□ -2.14
LINC00477Q96M19 AC109347.2-201ENST00000610220 349 ntBASIC1.68□□□□□ -2.14
LINC00477Q96M19 AL627230.6-201ENST00000611129 280 ntBASIC1.68□□□□□ -2.14
LINC00477Q96M19 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC1.68□□□□□ -2.14
LINC00477Q96M19 AC009831.4-201ENST00000620744 325 ntBASIC1.68□□□□□ -2.14
LINC00477Q96M19 MIR6132-201ENST00000622083 109 ntBASIC1.68□□□□□ -2.14
LINC00477Q96M19 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
LINC00477Q96M19 ATM-228ENST00000639240 498 ntTSL 5 BASIC1.68□□□□□ -2.14
LINC00477Q96M19 ATM-230ENST00000640388 578 ntTSL 5 BASIC1.68□□□□□ -2.14
LINC00477Q96M19 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.68□□□□□ -2.14
LINC00477Q96M19 ZNF720P1-201ENST00000562403 1939 ntBASIC1.68□□□□□ -2.14
LINC00477Q96M19 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC1.67□□□□□ -2.14
LINC00477Q96M19 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
LINC00477Q96M19 AC004520.1-201ENST00000608362 1413 ntBASIC1.67□□□□□ -2.14
LINC00477Q96M19 AC010889.1-201ENST00000566193 2666 ntBASIC1.67□□□□□ -2.14
LINC00477Q96M19 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
LINC00477Q96M19 Y_RNA.1-201ENST00000352915 104 ntBASIC1.67□□□□□ -2.14
LINC00477Q96M19 Y_RNA.3-201ENST00000362331 103 ntBASIC1.67□□□□□ -2.14
LINC00477Q96M19 Y_RNA.33-201ENST00000362591 102 ntBASIC1.67□□□□□ -2.14
LINC00477Q96M19 SNORD14B-201ENST00000364533 90 ntBASIC1.67□□□□□ -2.14
LINC00477Q96M19 RNU6-715P-201ENST00000365204 103 ntBASIC1.67□□□□□ -2.14
LINC00477Q96M19 RNU6-301P-201ENST00000384277 107 ntBASIC1.67□□□□□ -2.14
LINC00477Q96M19 Y_RNA.554-201ENST00000384672 102 ntBASIC1.67□□□□□ -2.14
LINC00477Q96M19 SNORA16.2-201ENST00000390991 127 ntBASIC1.67□□□□□ -2.14
LINC00477Q96M19 BTF3P7-201ENST00000407097 488 ntBASIC1.67□□□□□ -2.14
LINC00477Q96M19 RNU4-55P-201ENST00000410731 137 ntBASIC1.67□□□□□ -2.14
LINC00477Q96M19 RNA5SP270-201ENST00000411361 118 ntBASIC1.67□□□□□ -2.14
LINC00477Q96M19 RNA5SP111-201ENST00000411386 101 ntBASIC1.67□□□□□ -2.14
LINC00477Q96M19 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC1.67□□□□□ -2.14
LINC00477Q96M19 OR6C66P-201ENST00000414917 930 ntBASIC1.67□□□□□ -2.14
LINC00477Q96M19 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC1.67□□□□□ -2.14
LINC00477Q96M19 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC1.67□□□□□ -2.14
LINC00477Q96M19 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC1.67□□□□□ -2.14
LINC00477Q96M19 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC1.67□□□□□ -2.14
LINC00477Q96M19 PGBD4P6-201ENST00000421501 610 ntBASIC1.67□□□□□ -2.14
LINC00477Q96M19 AIMP1P2-201ENST00000425294 312 ntBASIC1.67□□□□□ -2.14
LINC00477Q96M19 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1.67□□□□□ -2.14
LINC00477Q96M19 AC073464.1-201ENST00000429823 534 ntBASIC1.67□□□□□ -2.14
LINC00477Q96M19 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC1.67□□□□□ -2.14
LINC00477Q96M19 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC1.67□□□□□ -2.14
LINC00477Q96M19 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC1.67□□□□□ -2.14
LINC00477Q96M19 BRK1P2-201ENST00000442875 223 ntBASIC1.67□□□□□ -2.14
LINC00477Q96M19 AC104058.1-201ENST00000448028 297 ntBASIC1.67□□□□□ -2.14
LINC00477Q96M19 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC1.67□□□□□ -2.14
LINC00477Q96M19 AP001486.1-201ENST00000463339 476 ntBASIC1.67□□□□□ -2.14
LINC00477Q96M19 AC087884.1-201ENST00000469738 328 ntBASIC1.67□□□□□ -2.14
LINC00477Q96M19 RPS3AP17-201ENST00000472594 777 ntBASIC1.67□□□□□ -2.14
LINC00477Q96M19 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC1.67□□□□□ -2.14
LINC00477Q96M19 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC1.67□□□□□ -2.14
LINC00477Q96M19 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC1.67□□□□□ -2.14
LINC00477Q96M19 RNA5SP200-201ENST00000516360 103 ntBASIC1.67□□□□□ -2.14
LINC00477Q96M19 SNORA31.25-201ENST00000517242 134 ntBASIC1.67□□□□□ -2.14
LINC00477Q96M19 RNU2-19P-201ENST00000517288 84 ntBASIC1.67□□□□□ -2.14
LINC00477Q96M19 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC1.67□□□□□ -2.14
LINC00477Q96M19 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
LINC00477Q96M19 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC1.67□□□□□ -2.14
LINC00477Q96M19 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC1.67□□□□□ -2.14
LINC00477Q96M19 ADI1P3-201ENST00000549509 470 ntBASIC1.67□□□□□ -2.14
LINC00477Q96M19 NTS-203ENST00000551529 801 ntTSL 3 BASIC1.67□□□□□ -2.14
LINC00477Q96M19 AL133241.1-201ENST00000556832 487 ntBASIC1.67□□□□□ -2.14
LINC00477Q96M19 NDUFAF4P1-201ENST00000559425 519 ntBASIC1.67□□□□□ -2.14
LINC00477Q96M19 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
LINC00477Q96M19 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC1.67□□□□□ -2.14
LINC00477Q96M19 AC008121.1-201ENST00000603244 268 ntBASIC1.67□□□□□ -2.14
LINC00477Q96M19 AC123912.5-201ENST00000605470 343 ntBASIC1.67□□□□□ -2.14
LINC00477Q96M19 AL139286.2-201ENST00000606838 396 ntBASIC1.67□□□□□ -2.14
LINC00477Q96M19 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC1.67□□□□□ -2.14
LINC00477Q96M19 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC1.67□□□□□ -2.14
LINC00477Q96M19 AC072046.2-201ENST00000618366 268 ntBASIC1.67□□□□□ -2.14
LINC00477Q96M19 OR5AK4P-201ENST00000635912 903 ntBASIC1.67□□□□□ -2.14
LINC00477Q96M19 MIR6863-201ENST00000636112 90 ntBASIC1.67□□□□□ -2.14
LINC00477Q96M19 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.67□□□□□ -2.14
LINC00477Q96M19 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC1.66□□□□□ -2.14
LINC00477Q96M19 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
LINC00477Q96M19 CDC27P3-201ENST00000635418 1910 ntBASIC1.66□□□□□ -2.14
LINC00477Q96M19 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.66□□□□□ -2.14
LINC00477Q96M19 RNU6-942P-201ENST00000363002 107 ntBASIC1.66□□□□□ -2.14
LINC00477Q96M19 RNU6-1097P-201ENST00000363586 107 ntBASIC1.66□□□□□ -2.14
LINC00477Q96M19 RNU6-1090P-201ENST00000364065 94 ntBASIC1.66□□□□□ -2.14
LINC00477Q96M19 RNU4-48P-201ENST00000365559 182 ntBASIC1.66□□□□□ -2.14
LINC00477Q96M19 RNU4-20P-201ENST00000365601 151 ntBASIC1.66□□□□□ -2.14
LINC00477Q96M19 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC1.66□□□□□ -2.14
LINC00477Q96M19 Y_RNA.516-201ENST00000384541 124 ntBASIC1.66□□□□□ -2.14
LINC00477Q96M19 RNU6-1179P-201ENST00000384667 107 ntBASIC1.66□□□□□ -2.14
LINC00477Q96M19 RNU6-903P-201ENST00000391270 109 ntBASIC1.66□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 112.3 ms