Protein–RNA interactions for Protein: Q96KN7

RPGRIP1, X-linked retinitis pigmentosa GTPase regulator-interacting protein 1, humanhuman

Predictions only

Length 1,286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRIP1Q96KN7 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.37□□□□□ -2.03
RPGRIP1Q96KN7 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.37□□□□□ -2.03
RPGRIP1Q96KN7 MIR412-201ENST00000362142 91 ntBASIC2.37□□□□□ -2.03
RPGRIP1Q96KN7 RNU6-108P-201ENST00000365558 107 ntBASIC2.37□□□□□ -2.03
RPGRIP1Q96KN7 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
RPGRIP1Q96KN7 SNORA6-201ENST00000384033 151 ntBASIC2.37□□□□□ -2.03
RPGRIP1Q96KN7 MIR578-201ENST00000384828 96 ntBASIC2.37□□□□□ -2.03
RPGRIP1Q96KN7 MIR1-2-201ENST00000384961 85 ntBASIC2.37□□□□□ -2.03
RPGRIP1Q96KN7 Y_RNA.623-201ENST00000411128 95 ntBASIC2.37□□□□□ -2.03
RPGRIP1Q96KN7 AL365338.1-201ENST00000422282 858 ntBASIC2.37□□□□□ -2.03
RPGRIP1Q96KN7 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
RPGRIP1Q96KN7 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.37□□□□□ -2.03
RPGRIP1Q96KN7 RNU6-956P-201ENST00000458868 103 ntBASIC2.37□□□□□ -2.03
RPGRIP1Q96KN7 AC025033.1-201ENST00000463883 194 ntBASIC2.37□□□□□ -2.03
RPGRIP1Q96KN7 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC2.37□□□□□ -2.03
RPGRIP1Q96KN7 AC132942.1-201ENST00000486753 483 ntBASIC2.37□□□□□ -2.03
RPGRIP1Q96KN7 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.37□□□□□ -2.03
RPGRIP1Q96KN7 OR5AL2P-201ENST00000532185 920 ntBASIC2.37□□□□□ -2.03
RPGRIP1Q96KN7 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.37□□□□□ -2.03
RPGRIP1Q96KN7 AC023043.2-201ENST00000589678 1026 ntBASIC2.37□□□□□ -2.03
RPGRIP1Q96KN7 AC119751.7-201ENST00000600494 245 ntBASIC2.37□□□□□ -2.03
RPGRIP1Q96KN7 uc_338.14-201ENST00000613162 166 ntBASIC2.37□□□□□ -2.03
RPGRIP1Q96KN7 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC2.37□□□□□ -2.03
RPGRIP1Q96KN7 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
RPGRIP1Q96KN7 USP12-203ENST00000620323 349 ntTSL 3 BASIC2.37□□□□□ -2.03
RPGRIP1Q96KN7 MIR219B-201ENST00000637023 88 ntBASIC2.37□□□□□ -2.03
RPGRIP1Q96KN7 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
RPGRIP1Q96KN7 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.37□□□□□ -2.03
RPGRIP1Q96KN7 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.37□□□□□ -2.03
RPGRIP1Q96KN7 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.36□□□□□ -2.03
RPGRIP1Q96KN7 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.36□□□□□ -2.03
RPGRIP1Q96KN7 MTND5P17-201ENST00000418405 1603 ntBASIC2.36□□□□□ -2.03
RPGRIP1Q96KN7 DLEU2_6.3-201ENST00000340052 136 ntBASIC2.36□□□□□ -2.03
RPGRIP1Q96KN7 Y_RNA.77-201ENST00000362962 107 ntBASIC2.36□□□□□ -2.03
RPGRIP1Q96KN7 RNU6-1097P-201ENST00000363586 107 ntBASIC2.36□□□□□ -2.03
RPGRIP1Q96KN7 SNORA62.1-201ENST00000364287 154 ntBASIC2.36□□□□□ -2.03
RPGRIP1Q96KN7 SNORD115-7-201ENST00000365306 82 ntBASIC2.36□□□□□ -2.03
RPGRIP1Q96KN7 RNU6-748P-201ENST00000384648 107 ntBASIC2.36□□□□□ -2.03
RPGRIP1Q96KN7 MIR221-201ENST00000385135 110 ntBASIC2.36□□□□□ -2.03
RPGRIP1Q96KN7 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
RPGRIP1Q96KN7 SNORA48.3-201ENST00000391081 134 ntBASIC2.36□□□□□ -2.03
RPGRIP1Q96KN7 AL023284.1-201ENST00000403956 276 ntBASIC2.36□□□□□ -2.03
RPGRIP1Q96KN7 RNU6-387P-201ENST00000411331 105 ntBASIC2.36□□□□□ -2.03
RPGRIP1Q96KN7 CYCSP48-201ENST00000417124 323 ntBASIC2.36□□□□□ -2.03
RPGRIP1Q96KN7 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC2.36□□□□□ -2.03
RPGRIP1Q96KN7 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.36□□□□□ -2.03
RPGRIP1Q96KN7 PIGFP2-201ENST00000421400 651 ntBASIC2.36□□□□□ -2.03
RPGRIP1Q96KN7 MTCYBP5-201ENST00000423752 1135 ntBASIC2.36□□□□□ -2.03
RPGRIP1Q96KN7 CALM2P2-201ENST00000428512 440 ntBASIC2.36□□□□□ -2.03
RPGRIP1Q96KN7 AC133104.1-201ENST00000429100 218 ntBASIC2.36□□□□□ -2.03
RPGRIP1Q96KN7 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC2.36□□□□□ -2.03
RPGRIP1Q96KN7 MTCO3P5-201ENST00000433620 714 ntBASIC2.36□□□□□ -2.03
RPGRIP1Q96KN7 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
RPGRIP1Q96KN7 RPS15AP9-201ENST00000439856 381 ntBASIC2.36□□□□□ -2.03
RPGRIP1Q96KN7 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC2.36□□□□□ -2.03
RPGRIP1Q96KN7 RNU6-717P-201ENST00000459076 104 ntBASIC2.36□□□□□ -2.03
RPGRIP1Q96KN7 RN7SKP210-201ENST00000459176 261 ntBASIC2.36□□□□□ -2.03
RPGRIP1Q96KN7 KLF3P2-201ENST00000465138 268 ntBASIC2.36□□□□□ -2.03
RPGRIP1Q96KN7 DYNLL1P5-201ENST00000467158 270 ntBASIC2.36□□□□□ -2.03
RPGRIP1Q96KN7 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC2.36□□□□□ -2.03
RPGRIP1Q96KN7 AC117532.1-201ENST00000514638 323 ntBASIC2.36□□□□□ -2.03
RPGRIP1Q96KN7 RNU1-40P-201ENST00000516816 164 ntBASIC2.36□□□□□ -2.03
RPGRIP1Q96KN7 RNU1-97P-201ENST00000516872 164 ntBASIC2.36□□□□□ -2.03
RPGRIP1Q96KN7 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC2.36□□□□□ -2.03
RPGRIP1Q96KN7 AL356057.1-201ENST00000533798 831 ntBASIC2.36□□□□□ -2.03
RPGRIP1Q96KN7 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC2.36□□□□□ -2.03
RPGRIP1Q96KN7 AC092325.1-201ENST00000566449 554 ntBASIC2.36□□□□□ -2.03
RPGRIP1Q96KN7 AC009127.3-201ENST00000570531 403 ntBASIC2.36□□□□□ -2.03
RPGRIP1Q96KN7 MIR4528-201ENST00000577763 90 ntBASIC2.36□□□□□ -2.03
RPGRIP1Q96KN7 RPS15AP11-201ENST00000594193 385 ntBASIC2.36□□□□□ -2.03
RPGRIP1Q96KN7 AC011494.1-201ENST00000596454 237 ntBASIC2.36□□□□□ -2.03
RPGRIP1Q96KN7 Z84480.1-201ENST00000605131 311 ntBASIC2.36□□□□□ -2.03
RPGRIP1Q96KN7 AC069294.1-201ENST00000608397 350 ntBASIC2.36□□□□□ -2.03
RPGRIP1Q96KN7 AC006566.1-201ENST00000608943 513 ntBASIC2.36□□□□□ -2.03
RPGRIP1Q96KN7 AC010378.1-201ENST00000619270 362 ntBASIC2.36□□□□□ -2.03
RPGRIP1Q96KN7 AC009831.4-201ENST00000620744 325 ntBASIC2.36□□□□□ -2.03
RPGRIP1Q96KN7 DLEU2_6.2-201ENST00000620994 136 ntBASIC2.36□□□□□ -2.03
RPGRIP1Q96KN7 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.36□□□□□ -2.03
RPGRIP1Q96KN7 AL109809.4-201ENST00000603520 2185 ntBASIC2.36□□□□□ -2.03
RPGRIP1Q96KN7 AL359854.1-201ENST00000614203 1594 ntBASIC2.36□□□□□ -2.03
RPGRIP1Q96KN7 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.35□□□□□ -2.03
RPGRIP1Q96KN7 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.35□□□□□ -2.03
RPGRIP1Q96KN7 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC2.35□□□□□ -2.03
RPGRIP1Q96KN7 RNU1-17P-201ENST00000363022 152 ntBASIC2.35□□□□□ -2.03
RPGRIP1Q96KN7 RNU6-181P-201ENST00000363225 107 ntBASIC2.35□□□□□ -2.03
RPGRIP1Q96KN7 SNORD14B-201ENST00000364533 90 ntBASIC2.35□□□□□ -2.03
RPGRIP1Q96KN7 SNORA75-201ENST00000384158 137 ntBASIC2.35□□□□□ -2.03
RPGRIP1Q96KN7 RNU6-1179P-201ENST00000384667 107 ntBASIC2.35□□□□□ -2.03
RPGRIP1Q96KN7 CIR1P3-201ENST00000405137 479 ntBASIC2.35□□□□□ -2.03
RPGRIP1Q96KN7 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC2.35□□□□□ -2.03
RPGRIP1Q96KN7 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC2.35□□□□□ -2.03
RPGRIP1Q96KN7 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC2.35□□□□□ -2.03
RPGRIP1Q96KN7 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC2.35□□□□□ -2.03
RPGRIP1Q96KN7 AL358934.1-201ENST00000432346 324 ntBASIC2.35□□□□□ -2.03
RPGRIP1Q96KN7 IPO7P1-201ENST00000442031 636 ntBASIC2.35□□□□□ -2.03
RPGRIP1Q96KN7 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC2.35□□□□□ -2.03
RPGRIP1Q96KN7 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC2.35□□□□□ -2.03
RPGRIP1Q96KN7 AL360271.2-201ENST00000447710 161 ntBASIC2.35□□□□□ -2.03
RPGRIP1Q96KN7 AC080013.2-201ENST00000460866 323 ntBASIC2.35□□□□□ -2.03
RPGRIP1Q96KN7 AC011005.2-201ENST00000487324 359 ntBASIC2.35□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms