Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC2.53□□□□□ -2
PDLIM5Q96HC4 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.53□□□□□ -2
PDLIM5Q96HC4 AC236972.1-201ENST00000433225 199 ntBASIC2.53□□□□□ -2
PDLIM5Q96HC4 MTND1P18-201ENST00000448191 573 ntBASIC2.53□□□□□ -2
PDLIM5Q96HC4 AP000852.1-201ENST00000472460 573 ntBASIC2.53□□□□□ -2
PDLIM5Q96HC4 AC096576.1-201ENST00000489014 359 ntBASIC2.53□□□□□ -2
PDLIM5Q96HC4 CKS1BP2-201ENST00000497342 240 ntBASIC2.53□□□□□ -2
PDLIM5Q96HC4 RNU6-685P-201ENST00000517088 95 ntBASIC2.53□□□□□ -2
PDLIM5Q96HC4 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC2.53□□□□□ -2
PDLIM5Q96HC4 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC2.53□□□□□ -2
PDLIM5Q96HC4 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.53□□□□□ -2
PDLIM5Q96HC4 MIR4703-201ENST00000577728 79 ntBASIC2.53□□□□□ -2
PDLIM5Q96HC4 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC2.53□□□□□ -2
PDLIM5Q96HC4 MIR3200-201ENST00000580767 85 ntBASIC2.53□□□□□ -2
PDLIM5Q96HC4 AC087045.1-201ENST00000605856 382 ntBASIC2.53□□□□□ -2
PDLIM5Q96HC4 RNU6-91P-201ENST00000607774 107 ntBASIC2.53□□□□□ -2
PDLIM5Q96HC4 AC096772.1-201ENST00000609146 564 ntBASIC2.53□□□□□ -2
PDLIM5Q96HC4 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC2.53□□□□□ -2
PDLIM5Q96HC4 AC024614.3-201ENST00000637860 256 ntBASIC2.53□□□□□ -2
PDLIM5Q96HC4 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
PDLIM5Q96HC4 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
PDLIM5Q96HC4 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.53□□□□□ -2
PDLIM5Q96HC4 RNU6-451P-201ENST00000362921 107 ntBASIC2.52□□□□□ -2.01
PDLIM5Q96HC4 SNORA67.1-201ENST00000364749 141 ntBASIC2.52□□□□□ -2.01
PDLIM5Q96HC4 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.52□□□□□ -2.01
PDLIM5Q96HC4 Y_RNA.573-201ENST00000384763 105 ntBASIC2.52□□□□□ -2.01
PDLIM5Q96HC4 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC2.52□□□□□ -2.01
PDLIM5Q96HC4 AL096701.2-201ENST00000416920 238 ntBASIC2.52□□□□□ -2.01
PDLIM5Q96HC4 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.52□□□□□ -2.01
PDLIM5Q96HC4 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC2.52□□□□□ -2.01
PDLIM5Q96HC4 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC2.52□□□□□ -2.01
PDLIM5Q96HC4 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC2.52□□□□□ -2.01
PDLIM5Q96HC4 AC004383.1-201ENST00000438135 289 ntBASIC2.52□□□□□ -2.01
PDLIM5Q96HC4 RPL7P12-201ENST00000446719 750 ntBASIC2.52□□□□□ -2.01
PDLIM5Q96HC4 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.52□□□□□ -2.01
PDLIM5Q96HC4 AC018437.1-201ENST00000492214 406 ntBASIC2.52□□□□□ -2.01
PDLIM5Q96HC4 RPS27P27-201ENST00000498779 255 ntBASIC2.52□□□□□ -2.01
PDLIM5Q96HC4 AC116353.2-201ENST00000505332 712 ntBASIC2.52□□□□□ -2.01
PDLIM5Q96HC4 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC2.52□□□□□ -2.01
PDLIM5Q96HC4 AC104806.1-201ENST00000508720 308 ntBASIC2.52□□□□□ -2.01
PDLIM5Q96HC4 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC2.52□□□□□ -2.01
PDLIM5Q96HC4 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC2.52□□□□□ -2.01
PDLIM5Q96HC4 AP005902.1-201ENST00000521358 186 ntBASIC2.52□□□□□ -2.01
PDLIM5Q96HC4 AC134698.4-201ENST00000523451 826 ntBASIC2.52□□□□□ -2.01
PDLIM5Q96HC4 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC2.52□□□□□ -2.01
PDLIM5Q96HC4 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.52□□□□□ -2.01
PDLIM5Q96HC4 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.52□□□□□ -2.01
PDLIM5Q96HC4 AC060766.3-201ENST00000591442 263 ntBASIC2.52□□□□□ -2.01
PDLIM5Q96HC4 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.52□□□□□ -2.01
PDLIM5Q96HC4 AL645944.1-201ENST00000603857 493 ntBASIC2.52□□□□□ -2.01
PDLIM5Q96HC4 AL670379.10-201ENST00000604330 253 ntBASIC2.52□□□□□ -2.01
PDLIM5Q96HC4 AL670379.9-201ENST00000605428 253 ntBASIC2.52□□□□□ -2.01
PDLIM5Q96HC4 AC005000.2-201ENST00000605468 310 ntBASIC2.52□□□□□ -2.01
PDLIM5Q96HC4 AC012409.4-201ENST00000612923 249 ntBASIC2.52□□□□□ -2.01
PDLIM5Q96HC4 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC2.52□□□□□ -2.01
PDLIM5Q96HC4 USP12-203ENST00000620323 349 ntTSL 3 BASIC2.52□□□□□ -2.01
PDLIM5Q96HC4 FO624990.1-201ENST00000636373 85 ntBASIC2.52□□□□□ -2.01
PDLIM5Q96HC4 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
PDLIM5Q96HC4 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
PDLIM5Q96HC4 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.52□□□□□ -2.01
PDLIM5Q96HC4 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
PDLIM5Q96HC4 AL354685.2-201ENST00000448218 1447 ntBASIC2.51□□□□□ -2.01
PDLIM5Q96HC4 MIR412-201ENST00000362142 91 ntBASIC2.51□□□□□ -2.01
PDLIM5Q96HC4 RNU6-859P-201ENST00000362728 107 ntBASIC2.51□□□□□ -2.01
PDLIM5Q96HC4 RNU6-166P-201ENST00000384371 107 ntBASIC2.51□□□□□ -2.01
PDLIM5Q96HC4 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
PDLIM5Q96HC4 RNU2-29P-201ENST00000410423 189 ntBASIC2.51□□□□□ -2.01
PDLIM5Q96HC4 RNU6-387P-201ENST00000411331 105 ntBASIC2.51□□□□□ -2.01
PDLIM5Q96HC4 AL353621.1-201ENST00000418219 243 ntBASIC2.51□□□□□ -2.01
PDLIM5Q96HC4 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC2.51□□□□□ -2.01
PDLIM5Q96HC4 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC2.51□□□□□ -2.01
PDLIM5Q96HC4 SEPT14P3-201ENST00000439401 183 ntBASIC2.51□□□□□ -2.01
PDLIM5Q96HC4 RPS12P2-201ENST00000439728 269 ntBASIC2.51□□□□□ -2.01
PDLIM5Q96HC4 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC2.51□□□□□ -2.01
PDLIM5Q96HC4 AL732372.2-207ENST00000445840 183 ntBASIC2.51□□□□□ -2.01
PDLIM5Q96HC4 SEPT14P2-201ENST00000453405 183 ntBASIC2.51□□□□□ -2.01
PDLIM5Q96HC4 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC2.51□□□□□ -2.01
PDLIM5Q96HC4 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.51□□□□□ -2.01
PDLIM5Q96HC4 AC133134.1-201ENST00000466800 359 ntBASIC2.51□□□□□ -2.01
PDLIM5Q96HC4 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
PDLIM5Q96HC4 SEPT14P4-201ENST00000513445 186 ntBASIC2.51□□□□□ -2.01
PDLIM5Q96HC4 RNU6-123P-201ENST00000516163 102 ntBASIC2.51□□□□□ -2.01
PDLIM5Q96HC4 RNU4ATAC8P-201ENST00000516196 109 ntBASIC2.51□□□□□ -2.01
PDLIM5Q96HC4 RNU5B-3P-201ENST00000516601 115 ntBASIC2.51□□□□□ -2.01
PDLIM5Q96HC4 FO082796.1-201ENST00000523795 183 ntBASIC2.51□□□□□ -2.01
PDLIM5Q96HC4 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.51□□□□□ -2.01
PDLIM5Q96HC4 MIR4424-201ENST00000585257 86 ntBASIC2.51□□□□□ -2.01
PDLIM5Q96HC4 RMST_3.1-201ENST00000611651 109 ntBASIC2.51□□□□□ -2.01
PDLIM5Q96HC4 uc_338.11-201ENST00000619132 160 ntBASIC2.51□□□□□ -2.01
PDLIM5Q96HC4 MIR5739-201ENST00000619803 80 ntBASIC2.51□□□□□ -2.01
PDLIM5Q96HC4 U6.114-201ENST00000636407 96 ntBASIC2.51□□□□□ -2.01
PDLIM5Q96HC4 AC009487.2-201ENST00000420969 6821 ntBASIC2.51□□□□□ -2.01
PDLIM5Q96HC4 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.51□□□□□ -2.01
PDLIM5Q96HC4 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.5□□□□□ -2.01
PDLIM5Q96HC4 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
PDLIM5Q96HC4 OR56A5-201ENST00000340110 738 ntBASIC2.5□□□□□ -2.01
PDLIM5Q96HC4 MIR6073-201ENST00000352083 89 ntBASIC2.5□□□□□ -2.01
PDLIM5Q96HC4 RNU6-552P-201ENST00000362869 119 ntBASIC2.5□□□□□ -2.01
PDLIM5Q96HC4 Y_RNA.88-201ENST00000363029 99 ntBASIC2.5□□□□□ -2.01
PDLIM5Q96HC4 RNA5SP456-201ENST00000364002 114 ntBASIC2.5□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 158.2 ms