Protein–RNA interactions for Protein: Q96DZ5

CLIP3, CAP-Gly domain-containing linker protein 3, humanhuman

Predictions only

Length 547 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3Q96DZ5 Y_RNA.14-201ENST00000362415 103 ntBASIC3.71□□□□□ -1.82
CLIP3Q96DZ5 Y_RNA.151-201ENST00000363566 112 ntBASIC3.71□□□□□ -1.82
CLIP3Q96DZ5 RNU6-1303P-201ENST00000364841 107 ntBASIC3.71□□□□□ -1.82
CLIP3Q96DZ5 SNORD14.1-201ENST00000365609 90 ntBASIC3.71□□□□□ -1.82
CLIP3Q96DZ5 RNU6-214P-201ENST00000384130 107 ntBASIC3.71□□□□□ -1.82
CLIP3Q96DZ5 Y_RNA.518-201ENST00000384552 113 ntBASIC3.71□□□□□ -1.82
CLIP3Q96DZ5 RNU2-38P-201ENST00000410856 79 ntBASIC3.71□□□□□ -1.82
CLIP3Q96DZ5 SYF2P2-201ENST00000417620 583 ntBASIC3.71□□□□□ -1.82
CLIP3Q96DZ5 BPY2DP-201ENST00000422208 265 ntBASIC3.71□□□□□ -1.82
CLIP3Q96DZ5 ELOCP20-201ENST00000422460 345 ntBASIC3.71□□□□□ -1.82
CLIP3Q96DZ5 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC3.71□□□□□ -1.82
CLIP3Q96DZ5 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.71□□□□□ -1.82
CLIP3Q96DZ5 AL133547.1-201ENST00000448546 220 ntBASIC3.71□□□□□ -1.82
CLIP3Q96DZ5 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.71□□□□□ -1.82
CLIP3Q96DZ5 AC069499.1-201ENST00000489433 509 ntBASIC3.71□□□□□ -1.82
CLIP3Q96DZ5 AC022447.4-201ENST00000504053 364 ntBASIC3.71□□□□□ -1.82
CLIP3Q96DZ5 SNORA40.14-201ENST00000516543 86 ntBASIC3.71□□□□□ -1.82
CLIP3Q96DZ5 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.71□□□□□ -1.82
CLIP3Q96DZ5 CYCSP39-201ENST00000565821 309 ntBASIC3.71□□□□□ -1.82
CLIP3Q96DZ5 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC3.71□□□□□ -1.82
CLIP3Q96DZ5 SNORA51-201ENST00000606420 132 ntBASIC3.71□□□□□ -1.82
CLIP3Q96DZ5 AC002044.1-201ENST00000606707 158 ntBASIC3.71□□□□□ -1.82
CLIP3Q96DZ5 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.71□□□□□ -1.82
CLIP3Q96DZ5 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.71□□□□□ -1.82
CLIP3Q96DZ5 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.71□□□□□ -1.82
CLIP3Q96DZ5 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CLIP3Q96DZ5 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.71□□□□□ -1.82
CLIP3Q96DZ5 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CLIP3Q96DZ5 UBE3AP2-201ENST00000429033 2259 ntBASIC3.7□□□□□ -1.82
CLIP3Q96DZ5 AC110491.1-201ENST00000562191 2010 ntBASIC3.7□□□□□ -1.82
CLIP3Q96DZ5 MFSD8-236ENST00000641509 4050 ntBASIC3.7□□□□□ -1.82
CLIP3Q96DZ5 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CLIP3Q96DZ5 RNU6-384P-201ENST00000364900 104 ntBASIC3.7□□□□□ -1.82
CLIP3Q96DZ5 RNU6-806P-201ENST00000365147 105 ntBASIC3.7□□□□□ -1.82
CLIP3Q96DZ5 Y_RNA.376-201ENST00000365638 108 ntBASIC3.7□□□□□ -1.82
CLIP3Q96DZ5 MIR517A-201ENST00000385001 87 ntBASIC3.7□□□□□ -1.82
CLIP3Q96DZ5 MIR34A-201ENST00000385130 110 ntBASIC3.7□□□□□ -1.82
CLIP3Q96DZ5 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.7□□□□□ -1.82
CLIP3Q96DZ5 RNU6-174P-201ENST00000410406 106 ntBASIC3.7□□□□□ -1.82
CLIP3Q96DZ5 RNU6-293P-201ENST00000411259 106 ntBASIC3.7□□□□□ -1.82
CLIP3Q96DZ5 CYCSP33-201ENST00000414485 327 ntBASIC3.7□□□□□ -1.82
CLIP3Q96DZ5 UBE2V1P4-201ENST00000425374 344 ntBASIC3.7□□□□□ -1.82
CLIP3Q96DZ5 RPL23AP50-201ENST00000434149 455 ntBASIC3.7□□□□□ -1.82
CLIP3Q96DZ5 AL500522.2-201ENST00000448562 343 ntBASIC3.7□□□□□ -1.82
CLIP3Q96DZ5 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC3.7□□□□□ -1.82
CLIP3Q96DZ5 SNORA31.21-201ENST00000517180 77 ntBASIC3.7□□□□□ -1.82
CLIP3Q96DZ5 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.7□□□□□ -1.82
CLIP3Q96DZ5 AC040926.1-201ENST00000530195 238 ntBASIC3.7□□□□□ -1.82
CLIP3Q96DZ5 YPEL5P3-201ENST00000547227 352 ntBASIC3.7□□□□□ -1.82
CLIP3Q96DZ5 GNRHR2P1-201ENST00000555315 631 ntBASIC3.7□□□□□ -1.82
CLIP3Q96DZ5 AC109446.1-201ENST00000566172 220 ntBASIC3.7□□□□□ -1.82
CLIP3Q96DZ5 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.7□□□□□ -1.82
CLIP3Q96DZ5 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC3.7□□□□□ -1.82
CLIP3Q96DZ5 AC008669.1-201ENST00000565823 2178 ntBASIC3.7□□□□□ -1.82
CLIP3Q96DZ5 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.7□□□□□ -1.82
CLIP3Q96DZ5 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CLIP3Q96DZ5 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.7□□□□□ -1.82
CLIP3Q96DZ5 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.7□□□□□ -1.82
CLIP3Q96DZ5 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CLIP3Q96DZ5 ZNF72P-201ENST00000425869 1908 ntBASIC3.7□□□□□ -1.82
CLIP3Q96DZ5 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.69□□□□□ -1.82
CLIP3Q96DZ5 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.69□□□□□ -1.82
CLIP3Q96DZ5 RNU4-42P-201ENST00000364738 142 ntBASIC3.69□□□□□ -1.82
CLIP3Q96DZ5 Y_RNA.314-201ENST00000365114 102 ntBASIC3.69□□□□□ -1.82
CLIP3Q96DZ5 RNU6-1329P-201ENST00000365664 107 ntBASIC3.69□□□□□ -1.82
CLIP3Q96DZ5 RNU6-713P-201ENST00000384761 107 ntBASIC3.69□□□□□ -1.82
CLIP3Q96DZ5 MIR10A-201ENST00000385043 110 ntBASIC3.69□□□□□ -1.82
CLIP3Q96DZ5 AL138885.1-201ENST00000405921 675 ntBASIC3.69□□□□□ -1.82
CLIP3Q96DZ5 BX276092.3-201ENST00000424182 230 ntBASIC3.69□□□□□ -1.82
CLIP3Q96DZ5 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.69□□□□□ -1.82
CLIP3Q96DZ5 TOMM20P4-201ENST00000427861 435 ntBASIC3.69□□□□□ -1.82
CLIP3Q96DZ5 AL133396.1-201ENST00000432048 687 ntBASIC3.69□□□□□ -1.82
CLIP3Q96DZ5 HMGB1P37-201ENST00000439613 609 ntBASIC3.69□□□□□ -1.82
CLIP3Q96DZ5 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.69□□□□□ -1.82
CLIP3Q96DZ5 FO393415.2-201ENST00000480085 343 ntBASIC3.69□□□□□ -1.82
CLIP3Q96DZ5 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC3.69□□□□□ -1.82
CLIP3Q96DZ5 AC093852.1-201ENST00000503587 266 ntBASIC3.69□□□□□ -1.82
CLIP3Q96DZ5 HMGN1P11-201ENST00000508668 303 ntBASIC3.69□□□□□ -1.82
CLIP3Q96DZ5 AC025465.3-201ENST00000510570 311 ntBASIC3.69□□□□□ -1.82
CLIP3Q96DZ5 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.69□□□□□ -1.82
CLIP3Q96DZ5 LINC00933-203ENST00000559812 219 ntBASIC3.69□□□□□ -1.82
CLIP3Q96DZ5 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.69□□□□□ -1.82
CLIP3Q96DZ5 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.69□□□□□ -1.82
CLIP3Q96DZ5 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC3.69□□□□□ -1.82
CLIP3Q96DZ5 RAC1P9-201ENST00000604990 392 ntBASIC3.69□□□□□ -1.82
CLIP3Q96DZ5 AL121772.2-201ENST00000614331 297 ntBASIC3.69□□□□□ -1.82
CLIP3Q96DZ5 AC039056.2-201ENST00000622261 511 ntBASIC3.69□□□□□ -1.82
CLIP3Q96DZ5 SNORA50A-202ENST00000629536 136 ntBASIC3.69□□□□□ -1.82
CLIP3Q96DZ5 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.69□□□□□ -1.82
CLIP3Q96DZ5 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.69□□□□□ -1.82
CLIP3Q96DZ5 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CLIP3Q96DZ5 GABRG2-229ENST00000641017 3628 ntBASIC3.68□□□□□ -1.82
CLIP3Q96DZ5 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CLIP3Q96DZ5 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CLIP3Q96DZ5 RNU1-35P-201ENST00000362782 153 ntBASIC3.68□□□□□ -1.82
CLIP3Q96DZ5 RNU6-596P-201ENST00000365395 98 ntBASIC3.68□□□□□ -1.82
CLIP3Q96DZ5 Z98749.2-208ENST00000381646 500 ntBASIC3.68□□□□□ -1.82
CLIP3Q96DZ5 Y_RNA.577-201ENST00000384794 101 ntBASIC3.68□□□□□ -1.82
CLIP3Q96DZ5 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
CLIP3Q96DZ5 AL139247.1-201ENST00000422768 325 ntBASIC3.68□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 166.4 ms