Protein–RNA interactions for Protein: Q96DI7

SNRNP40, U5 small nuclear ribonucleoprotein 40 kDa protein, humanhuman

Known RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40Q96DI7 AC105417.1-201ENST00000514691 285 ntBASIC2.35□□□□□ -2.03
SNRNP40Q96DI7 RN7SKP24-201ENST00000515888 284 ntBASIC2.35□□□□□ -2.03
SNRNP40Q96DI7 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
SNRNP40Q96DI7 BNIP3P6-201ENST00000549284 499 ntBASIC2.35□□□□□ -2.03
SNRNP40Q96DI7 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC2.35□□□□□ -2.03
SNRNP40Q96DI7 AL158827.2-201ENST00000602494 330 ntBASIC2.35□□□□□ -2.03
SNRNP40Q96DI7 AL627309.6-201ENST00000606857 840 ntBASIC2.35□□□□□ -2.03
SNRNP40Q96DI7 AC007684.1-201ENST00000609671 477 ntBASIC2.35□□□□□ -2.03
SNRNP40Q96DI7 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC2.35□□□□□ -2.03
SNRNP40Q96DI7 RMST_4.1-201ENST00000616886 107 ntBASIC2.35□□□□□ -2.03
SNRNP40Q96DI7 AC008121.3-201ENST00000618726 433 ntBASIC2.35□□□□□ -2.03
SNRNP40Q96DI7 U4.3-201ENST00000621047 82 ntBASIC2.35□□□□□ -2.03
SNRNP40Q96DI7 AL691447.3-201ENST00000635020 330 ntBASIC2.35□□□□□ -2.03
SNRNP40Q96DI7 SNORD56.1-201ENST00000362913 68 ntBASIC2.34□□□□□ -2.03
SNRNP40Q96DI7 RNU6-527P-201ENST00000363425 104 ntBASIC2.34□□□□□ -2.03
SNRNP40Q96DI7 RNU1-91P-201ENST00000364746 163 ntBASIC2.34□□□□□ -2.03
SNRNP40Q96DI7 RNU6-487P-201ENST00000365430 104 ntBASIC2.34□□□□□ -2.03
SNRNP40Q96DI7 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
SNRNP40Q96DI7 RNU6-393P-201ENST00000384475 107 ntBASIC2.34□□□□□ -2.03
SNRNP40Q96DI7 Y_RNA.559-201ENST00000384686 107 ntBASIC2.34□□□□□ -2.03
SNRNP40Q96DI7 GSTA9P-201ENST00000406231 611 ntBASIC2.34□□□□□ -2.03
SNRNP40Q96DI7 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.34□□□□□ -2.03
SNRNP40Q96DI7 SNORD88.1-201ENST00000408684 91 ntBASIC2.34□□□□□ -2.03
SNRNP40Q96DI7 RNA5SP425-201ENST00000410336 112 ntBASIC2.34□□□□□ -2.03
SNRNP40Q96DI7 RNU2-29P-201ENST00000410423 189 ntBASIC2.34□□□□□ -2.03
SNRNP40Q96DI7 RNU2-66P-201ENST00000410650 161 ntBASIC2.34□□□□□ -2.03
SNRNP40Q96DI7 OR9R1P-201ENST00000412200 877 ntBASIC2.34□□□□□ -2.03
SNRNP40Q96DI7 AC007064.1-201ENST00000412238 351 ntBASIC2.34□□□□□ -2.03
SNRNP40Q96DI7 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC2.34□□□□□ -2.03
SNRNP40Q96DI7 AC010975.2-201ENST00000427781 588 ntBASIC2.34□□□□□ -2.03
SNRNP40Q96DI7 USP9YP14-201ENST00000430663 563 ntBASIC2.34□□□□□ -2.03
SNRNP40Q96DI7 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC2.34□□□□□ -2.03
SNRNP40Q96DI7 AL591043.1-201ENST00000432461 424 ntBASIC2.34□□□□□ -2.03
SNRNP40Q96DI7 AC002486.1-201ENST00000435098 391 ntBASIC2.34□□□□□ -2.03
SNRNP40Q96DI7 RPS29P6-201ENST00000438196 145 ntBASIC2.34□□□□□ -2.03
SNRNP40Q96DI7 DNAJC19P4-201ENST00000440115 345 ntBASIC2.34□□□□□ -2.03
SNRNP40Q96DI7 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.34□□□□□ -2.03
SNRNP40Q96DI7 SNRPFP3-201ENST00000457792 225 ntBASIC2.34□□□□□ -2.03
SNRNP40Q96DI7 RNU7-63P-201ENST00000459054 62 ntBASIC2.34□□□□□ -2.03
SNRNP40Q96DI7 GMFBP1-201ENST00000467831 427 ntBASIC2.34□□□□□ -2.03
SNRNP40Q96DI7 RPL7P43-201ENST00000478876 753 ntBASIC2.34□□□□□ -2.03
SNRNP40Q96DI7 SRIP1-201ENST00000489235 288 ntBASIC2.34□□□□□ -2.03
SNRNP40Q96DI7 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC2.34□□□□□ -2.03
SNRNP40Q96DI7 HMGB1P29-201ENST00000505659 499 ntBASIC2.34□□□□□ -2.03
SNRNP40Q96DI7 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC2.34□□□□□ -2.03
SNRNP40Q96DI7 AC108078.1-201ENST00000508073 725 ntBASIC2.34□□□□□ -2.03
SNRNP40Q96DI7 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.34□□□□□ -2.03
SNRNP40Q96DI7 CBX3P7-201ENST00000532876 502 ntBASIC2.34□□□□□ -2.03
SNRNP40Q96DI7 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
SNRNP40Q96DI7 AC009063.1-201ENST00000563342 702 ntBASIC2.34□□□□□ -2.03
SNRNP40Q96DI7 AC136619.2-201ENST00000563361 631 ntBASIC2.34□□□□□ -2.03
SNRNP40Q96DI7 MTND1P15-201ENST00000579262 949 ntBASIC2.34□□□□□ -2.03
SNRNP40Q96DI7 AC103987.3-201ENST00000582071 292 ntBASIC2.34□□□□□ -2.03
SNRNP40Q96DI7 MIR3605-201ENST00000583214 100 ntBASIC2.34□□□□□ -2.03
SNRNP40Q96DI7 MIR4635-201ENST00000583759 79 ntBASIC2.34□□□□□ -2.03
SNRNP40Q96DI7 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC2.34□□□□□ -2.03
SNRNP40Q96DI7 AL670379.2-201ENST00000604983 252 ntBASIC2.34□□□□□ -2.03
SNRNP40Q96DI7 Z99129.1-201ENST00000612510 255 ntBASIC2.34□□□□□ -2.03
SNRNP40Q96DI7 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.34□□□□□ -2.03
SNRNP40Q96DI7 uc_338.15-201ENST00000615470 191 ntBASIC2.34□□□□□ -2.03
SNRNP40Q96DI7 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.34□□□□□ -2.04
SNRNP40Q96DI7 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.34□□□□□ -2.04
SNRNP40Q96DI7 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.33□□□□□ -2.04
SNRNP40Q96DI7 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
SNRNP40Q96DI7 RPL9P7-201ENST00000330965 580 ntBASIC2.33□□□□□ -2.04
SNRNP40Q96DI7 RNU6-212P-201ENST00000362642 104 ntBASIC2.33□□□□□ -2.04
SNRNP40Q96DI7 RNU6-1010P-201ENST00000362757 107 ntBASIC2.33□□□□□ -2.04
SNRNP40Q96DI7 RNA5SP393-201ENST00000363423 117 ntBASIC2.33□□□□□ -2.04
SNRNP40Q96DI7 Y_RNA.159-201ENST00000363674 87 ntBASIC2.33□□□□□ -2.04
SNRNP40Q96DI7 SNORD114-30-201ENST00000364448 72 ntBASIC2.33□□□□□ -2.04
SNRNP40Q96DI7 Y_RNA.318-201ENST00000365131 97 ntBASIC2.33□□□□□ -2.04
SNRNP40Q96DI7 OR5H15-201ENST00000383696 930 ntBASIC2.33□□□□□ -2.04
SNRNP40Q96DI7 Y_RNA.436-201ENST00000384097 102 ntBASIC2.33□□□□□ -2.04
SNRNP40Q96DI7 RNU6-434P-201ENST00000384376 107 ntBASIC2.33□□□□□ -2.04
SNRNP40Q96DI7 MIR181B1-201ENST00000385240 110 ntBASIC2.33□□□□□ -2.04
SNRNP40Q96DI7 MIR524-201ENST00000385242 87 ntBASIC2.33□□□□□ -2.04
SNRNP40Q96DI7 MORN2-203ENST00000409131 544 ntTSL 5 BASIC2.33□□□□□ -2.04
SNRNP40Q96DI7 AL451074.5-201ENST00000415894 435 ntBASIC2.33□□□□□ -2.04
SNRNP40Q96DI7 AC074117.2-201ENST00000417130 397 ntBASIC2.33□□□□□ -2.04
SNRNP40Q96DI7 MORF4L1P6-201ENST00000418771 268 ntBASIC2.33□□□□□ -2.04
SNRNP40Q96DI7 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.33□□□□□ -2.04
SNRNP40Q96DI7 AL161788.1-201ENST00000441805 169 ntBASIC2.33□□□□□ -2.04
SNRNP40Q96DI7 MTCO2P7-201ENST00000446518 666 ntBASIC2.33□□□□□ -2.04
SNRNP40Q96DI7 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC2.33□□□□□ -2.04
SNRNP40Q96DI7 AC079140.5-201ENST00000507882 310 ntBASIC2.33□□□□□ -2.04
SNRNP40Q96DI7 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.33□□□□□ -2.04
SNRNP40Q96DI7 RNA5SP76-201ENST00000516277 87 ntBASIC2.33□□□□□ -2.04
SNRNP40Q96DI7 RNU1-104P-201ENST00000517280 175 ntBASIC2.33□□□□□ -2.04
SNRNP40Q96DI7 AP001893.2-201ENST00000526949 202 ntBASIC2.33□□□□□ -2.04
SNRNP40Q96DI7 AC243972.3-201ENST00000539655 198 ntBASIC2.33□□□□□ -2.04
SNRNP40Q96DI7 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.33□□□□□ -2.04
SNRNP40Q96DI7 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC2.33□□□□□ -2.04
SNRNP40Q96DI7 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC2.33□□□□□ -2.04
SNRNP40Q96DI7 UBE2Q2P8-201ENST00000560644 102 ntBASIC2.33□□□□□ -2.04
SNRNP40Q96DI7 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC2.33□□□□□ -2.04
SNRNP40Q96DI7 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC2.33□□□□□ -2.04
SNRNP40Q96DI7 AGGF1P4-201ENST00000568249 801 ntBASIC2.33□□□□□ -2.04
SNRNP40Q96DI7 LRRC37A5P-203ENST00000580181 585 ntBASIC2.33□□□□□ -2.04
SNRNP40Q96DI7 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC2.33□□□□□ -2.04
SNRNP40Q96DI7 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.33□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms