Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 AC004852.3-201ENST00000614131 326 ntBASIC3.39□□□□□ -1.87
TRIM43Q96BQ3 AL161629.2-201ENST00000615347 275 ntBASIC3.39□□□□□ -1.87
TRIM43Q96BQ3 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.39□□□□□ -1.87
TRIM43Q96BQ3 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC3.39□□□□□ -1.87
TRIM43Q96BQ3 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.39□□□□□ -1.87
TRIM43Q96BQ3 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
TRIM43Q96BQ3 AC110491.1-201ENST00000562191 2010 ntBASIC3.39□□□□□ -1.87
TRIM43Q96BQ3 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.39□□□□□ -1.87
TRIM43Q96BQ3 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.39□□□□□ -1.87
TRIM43Q96BQ3 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
TRIM43Q96BQ3 AC007496.3-201ENST00000624987 3443 ntBASIC3.38□□□□□ -1.87
TRIM43Q96BQ3 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
TRIM43Q96BQ3 SNORD73A-201ENST00000386062 65 ntBASIC3.38□□□□□ -1.87
TRIM43Q96BQ3 RPL37P10-201ENST00000412884 288 ntBASIC3.38□□□□□ -1.87
TRIM43Q96BQ3 HIGD1AP2-201ENST00000446367 280 ntBASIC3.38□□□□□ -1.87
TRIM43Q96BQ3 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.38□□□□□ -1.87
TRIM43Q96BQ3 MTND1P17-201ENST00000448961 204 ntBASIC3.38□□□□□ -1.87
TRIM43Q96BQ3 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC3.38□□□□□ -1.87
TRIM43Q96BQ3 AL031183.1-201ENST00000457667 207 ntBASIC3.38□□□□□ -1.87
TRIM43Q96BQ3 Y_RNA.635-201ENST00000459041 101 ntBASIC3.38□□□□□ -1.87
TRIM43Q96BQ3 RPS27P27-201ENST00000498779 255 ntBASIC3.38□□□□□ -1.87
TRIM43Q96BQ3 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.38□□□□□ -1.87
TRIM43Q96BQ3 LIAS-206ENST00000513731 826 ntTSL 5 BASIC3.38□□□□□ -1.87
TRIM43Q96BQ3 RN7SKP272-201ENST00000516988 232 ntBASIC3.38□□□□□ -1.87
TRIM43Q96BQ3 AC109479.2-201ENST00000517842 174 ntBASIC3.38□□□□□ -1.87
TRIM43Q96BQ3 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC3.38□□□□□ -1.87
TRIM43Q96BQ3 AC104576.1-201ENST00000524225 88 ntBASIC3.38□□□□□ -1.87
TRIM43Q96BQ3 AP004607.1-201ENST00000524456 203 ntBASIC3.38□□□□□ -1.87
TRIM43Q96BQ3 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
TRIM43Q96BQ3 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC3.38□□□□□ -1.87
TRIM43Q96BQ3 AC113139.1-201ENST00000605049 239 ntBASIC3.38□□□□□ -1.87
TRIM43Q96BQ3 MIR3199-2-201ENST00000636243 86 ntBASIC3.38□□□□□ -1.87
TRIM43Q96BQ3 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
TRIM43Q96BQ3 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.38□□□□□ -1.87
TRIM43Q96BQ3 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
TRIM43Q96BQ3 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
TRIM43Q96BQ3 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC3.37□□□□□ -1.87
TRIM43Q96BQ3 Y_RNA.11-201ENST00000362375 109 ntBASIC3.37□□□□□ -1.87
TRIM43Q96BQ3 RNU5E-7P-201ENST00000365290 117 ntBASIC3.37□□□□□ -1.87
TRIM43Q96BQ3 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
TRIM43Q96BQ3 SNORA18.3-201ENST00000384122 132 ntBASIC3.37□□□□□ -1.87
TRIM43Q96BQ3 RNU6-293P-201ENST00000411259 106 ntBASIC3.37□□□□□ -1.87
TRIM43Q96BQ3 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC3.37□□□□□ -1.87
TRIM43Q96BQ3 RPL7P37-201ENST00000425095 738 ntBASIC3.37□□□□□ -1.87
TRIM43Q96BQ3 RPS3AP52-201ENST00000435639 297 ntBASIC3.37□□□□□ -1.87
TRIM43Q96BQ3 AL714022.1-201ENST00000439897 151 ntBASIC3.37□□□□□ -1.87
TRIM43Q96BQ3 AC098831.1-201ENST00000440661 216 ntBASIC3.37□□□□□ -1.87
TRIM43Q96BQ3 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC3.37□□□□□ -1.87
TRIM43Q96BQ3 MTND4P17-201ENST00000470444 350 ntBASIC3.37□□□□□ -1.87
TRIM43Q96BQ3 MTND5P5-201ENST00000503764 376 ntBASIC3.37□□□□□ -1.87
TRIM43Q96BQ3 YWHAEP4-201ENST00000505390 198 ntBASIC3.37□□□□□ -1.87
TRIM43Q96BQ3 AC092436.3-201ENST00000511788 257 ntBASIC3.37□□□□□ -1.87
TRIM43Q96BQ3 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC3.37□□□□□ -1.87
TRIM43Q96BQ3 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.37□□□□□ -1.87
TRIM43Q96BQ3 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC3.37□□□□□ -1.87
TRIM43Q96BQ3 AL355375.2-201ENST00000574825 175 ntBASIC3.37□□□□□ -1.87
TRIM43Q96BQ3 MIR4795-201ENST00000584182 89 ntBASIC3.37□□□□□ -1.87
TRIM43Q96BQ3 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.37□□□□□ -1.87
TRIM43Q96BQ3 AL670379.10-201ENST00000604330 253 ntBASIC3.37□□□□□ -1.87
TRIM43Q96BQ3 ELOCP5-201ENST00000604924 333 ntBASIC3.37□□□□□ -1.87
TRIM43Q96BQ3 AL670379.9-201ENST00000605428 253 ntBASIC3.37□□□□□ -1.87
TRIM43Q96BQ3 MIR6134-201ENST00000617606 109 ntBASIC3.37□□□□□ -1.87
TRIM43Q96BQ3 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
TRIM43Q96BQ3 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
TRIM43Q96BQ3 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
TRIM43Q96BQ3 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
TRIM43Q96BQ3 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
TRIM43Q96BQ3 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
TRIM43Q96BQ3 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
TRIM43Q96BQ3 MIR518D-201ENST00000385014 87 ntBASIC3.36□□□□□ -1.87
TRIM43Q96BQ3 SNORD56-201ENST00000413522 71 ntBASIC3.36□□□□□ -1.87
TRIM43Q96BQ3 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC3.36□□□□□ -1.87
TRIM43Q96BQ3 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.36□□□□□ -1.87
TRIM43Q96BQ3 HMGN2P10-201ENST00000448085 265 ntBASIC3.36□□□□□ -1.87
TRIM43Q96BQ3 RN7SL93P-201ENST00000463035 293 ntBASIC3.36□□□□□ -1.87
TRIM43Q96BQ3 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.36□□□□□ -1.87
TRIM43Q96BQ3 RPL23AP45-201ENST00000476406 468 ntBASIC3.36□□□□□ -1.87
TRIM43Q96BQ3 TRBV12-1-201ENST00000479785 344 ntBASIC3.36□□□□□ -1.87
TRIM43Q96BQ3 RPS4XP22-201ENST00000480755 780 ntBASIC3.36□□□□□ -1.87
TRIM43Q96BQ3 AC006483.1-201ENST00000487308 313 ntBASIC3.36□□□□□ -1.87
TRIM43Q96BQ3 MTND4LP22-201ENST00000508209 276 ntBASIC3.36□□□□□ -1.87
TRIM43Q96BQ3 RN7SKP24-201ENST00000515888 284 ntBASIC3.36□□□□□ -1.87
TRIM43Q96BQ3 RNU6-277P-201ENST00000516272 106 ntBASIC3.36□□□□□ -1.87
TRIM43Q96BQ3 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC3.36□□□□□ -1.87
TRIM43Q96BQ3 AC010378.1-201ENST00000619270 362 ntBASIC3.36□□□□□ -1.87
TRIM43Q96BQ3 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
TRIM43Q96BQ3 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.36□□□□□ -1.87
TRIM43Q96BQ3 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC3.36□□□□□ -1.87
TRIM43Q96BQ3 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
TRIM43Q96BQ3 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.36□□□□□ -1.87
TRIM43Q96BQ3 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
TRIM43Q96BQ3 AC010680.1-201ENST00000590024 3590 ntBASIC3.36□□□□□ -1.87
TRIM43Q96BQ3 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.36□□□□□ -1.87
TRIM43Q96BQ3 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
TRIM43Q96BQ3 Y_RNA.339-201ENST00000365325 102 ntBASIC3.35□□□□□ -1.87
TRIM43Q96BQ3 Y_RNA.387-201ENST00000383918 102 ntBASIC3.35□□□□□ -1.87
TRIM43Q96BQ3 Y_RNA.474-201ENST00000384341 102 ntBASIC3.35□□□□□ -1.87
TRIM43Q96BQ3 RNU6-95P-201ENST00000384697 107 ntBASIC3.35□□□□□ -1.87
TRIM43Q96BQ3 RN7SKP158-201ENST00000410453 326 ntBASIC3.35□□□□□ -1.87
TRIM43Q96BQ3 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 344.7 ms