Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 AC023141.4-201ENST00000412031 328 ntBASIC3.5□□□□□ -1.85
HPS3Q969F9 RPL21P40-201ENST00000428586 483 ntBASIC3.5□□□□□ -1.85
HPS3Q969F9 AL161651.1-201ENST00000440882 223 ntBASIC3.5□□□□□ -1.85
HPS3Q969F9 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC3.5□□□□□ -1.85
HPS3Q969F9 RPS27P29-201ENST00000463110 252 ntBASIC3.5□□□□□ -1.85
HPS3Q969F9 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.5□□□□□ -1.85
HPS3Q969F9 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC3.5□□□□□ -1.85
HPS3Q969F9 SNORA43.2-201ENST00000516652 128 ntBASIC3.5□□□□□ -1.85
HPS3Q969F9 SNORD19.2-201ENST00000516978 73 ntBASIC3.5□□□□□ -1.85
HPS3Q969F9 RN7SKP57-201ENST00000517248 293 ntBASIC3.5□□□□□ -1.85
HPS3Q969F9 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC3.5□□□□□ -1.85
HPS3Q969F9 AL670379.10-201ENST00000604330 253 ntBASIC3.5□□□□□ -1.85
HPS3Q969F9 AL670379.9-201ENST00000605428 253 ntBASIC3.5□□□□□ -1.85
HPS3Q969F9 AC064836.2-201ENST00000609491 462 ntBASIC3.5□□□□□ -1.85
HPS3Q969F9 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC3.5□□□□□ -1.85
HPS3Q969F9 AC011890.2-201ENST00000613393 294 ntBASIC3.5□□□□□ -1.85
HPS3Q969F9 AC010378.1-201ENST00000619270 362 ntBASIC3.5□□□□□ -1.85
HPS3Q969F9 U4.7-201ENST00000638126 106 ntBASIC3.5□□□□□ -1.85
HPS3Q969F9 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.5□□□□□ -1.85
HPS3Q969F9 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.49□□□□□ -1.85
HPS3Q969F9 Y_RNA.61-201ENST00000362835 102 ntBASIC3.49□□□□□ -1.85
HPS3Q969F9 Y_RNA.339-201ENST00000365325 102 ntBASIC3.49□□□□□ -1.85
HPS3Q969F9 RNU6-827P-201ENST00000365553 106 ntBASIC3.49□□□□□ -1.85
HPS3Q969F9 RNU6-95P-201ENST00000384697 107 ntBASIC3.49□□□□□ -1.85
HPS3Q969F9 MIR767-201ENST00000390228 109 ntBASIC3.49□□□□□ -1.85
HPS3Q969F9 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
HPS3Q969F9 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.49□□□□□ -1.85
HPS3Q969F9 RNA5SP120-201ENST00000410900 112 ntBASIC3.49□□□□□ -1.85
HPS3Q969F9 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC3.49□□□□□ -1.85
HPS3Q969F9 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
HPS3Q969F9 AC096649.2-201ENST00000416186 393 ntBASIC3.49□□□□□ -1.85
HPS3Q969F9 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.49□□□□□ -1.85
HPS3Q969F9 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC3.49□□□□□ -1.85
HPS3Q969F9 RPS3AP52-201ENST00000435639 297 ntBASIC3.49□□□□□ -1.85
HPS3Q969F9 SNORA59A-201ENST00000459326 152 ntBASIC3.49□□□□□ -1.85
HPS3Q969F9 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.49□□□□□ -1.85
HPS3Q969F9 RPL23AP49-201ENST00000492925 468 ntBASIC3.49□□□□□ -1.85
HPS3Q969F9 AK3P2-201ENST00000507976 429 ntBASIC3.49□□□□□ -1.85
HPS3Q969F9 RNU1-54P-201ENST00000517181 120 ntBASIC3.49□□□□□ -1.85
HPS3Q969F9 DNAJC8P1-201ENST00000554535 372 ntBASIC3.49□□□□□ -1.85
HPS3Q969F9 UBL5P2-201ENST00000583788 219 ntBASIC3.49□□□□□ -1.85
HPS3Q969F9 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.49□□□□□ -1.85
HPS3Q969F9 AL121917.1-203ENST00000605534 577 ntBASIC3.49□□□□□ -1.85
HPS3Q969F9 AC244517.12-201ENST00000623581 663 ntBASIC3.49□□□□□ -1.85
HPS3Q969F9 SCARNA15.3-201ENST00000626315 122 ntBASIC3.49□□□□□ -1.85
HPS3Q969F9 SCARNA4.1-201ENST00000628597 123 ntBASIC3.49□□□□□ -1.85
HPS3Q969F9 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
HPS3Q969F9 RNU6-527P-201ENST00000363425 104 ntBASIC3.48□□□□□ -1.85
HPS3Q969F9 RNU6-799P-201ENST00000363567 107 ntBASIC3.48□□□□□ -1.85
HPS3Q969F9 RNA5SP139-201ENST00000364340 117 ntBASIC3.48□□□□□ -1.85
HPS3Q969F9 Y_RNA.387-201ENST00000383918 102 ntBASIC3.48□□□□□ -1.85
HPS3Q969F9 RN7SKP158-201ENST00000410453 326 ntBASIC3.48□□□□□ -1.85
HPS3Q969F9 RNU2-49P-201ENST00000410666 184 ntBASIC3.48□□□□□ -1.85
HPS3Q969F9 AL117339.3-201ENST00000418733 162 ntBASIC3.48□□□□□ -1.85
HPS3Q969F9 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.48□□□□□ -1.85
HPS3Q969F9 AL590632.1-201ENST00000424289 371 ntBASIC3.48□□□□□ -1.85
HPS3Q969F9 AL365496.1-201ENST00000426885 215 ntBASIC3.48□□□□□ -1.85
HPS3Q969F9 FABP5P14-201ENST00000437273 393 ntBASIC3.48□□□□□ -1.85
HPS3Q969F9 RN7SL504P-201ENST00000494496 287 ntBASIC3.48□□□□□ -1.85
HPS3Q969F9 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC3.48□□□□□ -1.85
HPS3Q969F9 RNA5SP217-201ENST00000515959 91 ntBASIC3.48□□□□□ -1.85
HPS3Q969F9 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.48□□□□□ -1.85
HPS3Q969F9 AL355375.2-201ENST00000574825 175 ntBASIC3.48□□□□□ -1.85
HPS3Q969F9 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC3.48□□□□□ -1.85
HPS3Q969F9 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC3.48□□□□□ -1.85
HPS3Q969F9 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.48□□□□□ -1.85
HPS3Q969F9 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.48□□□□□ -1.85
HPS3Q969F9 AC008669.1-201ENST00000565823 2178 ntBASIC3.48□□□□□ -1.85
HPS3Q969F9 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.47□□□□□ -1.85
HPS3Q969F9 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
HPS3Q969F9 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
HPS3Q969F9 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.47□□□□□ -1.85
HPS3Q969F9 SNORD62.1-201ENST00000362541 86 ntBASIC3.47□□□□□ -1.85
HPS3Q969F9 RNU6-942P-201ENST00000363002 107 ntBASIC3.47□□□□□ -1.85
HPS3Q969F9 RNU6-593P-201ENST00000364716 112 ntBASIC3.47□□□□□ -1.85
HPS3Q969F9 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.47□□□□□ -1.85
HPS3Q969F9 Y_RNA.474-201ENST00000384341 102 ntBASIC3.47□□□□□ -1.85
HPS3Q969F9 RNU6-933P-201ENST00000384424 107 ntBASIC3.47□□□□□ -1.85
HPS3Q969F9 SNORD67-201ENST00000390833 111 ntBASIC3.47□□□□□ -1.85
HPS3Q969F9 FTH1P15-201ENST00000406984 280 ntBASIC3.47□□□□□ -1.85
HPS3Q969F9 AL591043.1-201ENST00000432461 424 ntBASIC3.47□□□□□ -1.85
HPS3Q969F9 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC3.47□□□□□ -1.85
HPS3Q969F9 AC013470.1-201ENST00000453438 462 ntBASIC3.47□□□□□ -1.85
HPS3Q969F9 AL441985.1-201ENST00000457727 251 ntBASIC3.47□□□□□ -1.85
HPS3Q969F9 RN7SL863P-201ENST00000462370 296 ntBASIC3.47□□□□□ -1.85
HPS3Q969F9 MRPL42P6-201ENST00000486397 371 ntBASIC3.47□□□□□ -1.85
HPS3Q969F9 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC3.47□□□□□ -1.85
HPS3Q969F9 RNU6-277P-201ENST00000516272 106 ntBASIC3.47□□□□□ -1.85
HPS3Q969F9 AC068657.1-201ENST00000520807 306 ntBASIC3.47□□□□□ -1.85
HPS3Q969F9 CR383656.8-201ENST00000549046 145 ntBASIC3.47□□□□□ -1.85
HPS3Q969F9 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.47□□□□□ -1.85
HPS3Q969F9 AC103996.1-201ENST00000555468 102 ntBASIC3.47□□□□□ -1.85
HPS3Q969F9 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC3.47□□□□□ -1.85
HPS3Q969F9 MIR5680-201ENST00000577577 84 ntBASIC3.47□□□□□ -1.85
HPS3Q969F9 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.47□□□□□ -1.85
HPS3Q969F9 MIR6128-201ENST00000615528 109 ntBASIC3.47□□□□□ -1.85
HPS3Q969F9 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC3.47□□□□□ -1.85
HPS3Q969F9 MTND5P27-201ENST00000428871 1720 ntBASIC3.47□□□□□ -1.85
HPS3Q969F9 AC010889.1-201ENST00000566193 2666 ntBASIC3.46□□□□□ -1.86
HPS3Q969F9 ZBTB8OSP1-201ENST00000342688 498 ntBASIC3.46□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 287.5 ms