Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 SNORD46.1-201ENST00000364139 104 ntBASIC4.94□□□□□ -1.62
HLA-CQ95604 RNU6-454P-201ENST00000364292 107 ntBASIC4.94□□□□□ -1.62
HLA-CQ95604 Y_RNA.456-201ENST00000384232 111 ntBASIC4.94□□□□□ -1.62
HLA-CQ95604 MIR493-201ENST00000385254 89 ntBASIC4.94□□□□□ -1.62
HLA-CQ95604 RNU6-1228P-201ENST00000391014 107 ntBASIC4.94□□□□□ -1.62
HLA-CQ95604 MIR208B-201ENST00000401172 77 ntBASIC4.94□□□□□ -1.62
HLA-CQ95604 AL031003.1-201ENST00000404229 172 ntBASIC4.94□□□□□ -1.62
HLA-CQ95604 AC099548.1-201ENST00000421443 426 ntBASIC4.94□□□□□ -1.62
HLA-CQ95604 HMGN2P27-201ENST00000427352 270 ntBASIC4.94□□□□□ -1.62
HLA-CQ95604 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
HLA-CQ95604 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC4.94□□□□□ -1.62
HLA-CQ95604 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC4.94□□□□□ -1.62
HLA-CQ95604 AP001328.1-201ENST00000528550 176 ntBASIC4.94□□□□□ -1.62
HLA-CQ95604 AP004242.1-201ENST00000533701 349 ntBASIC4.94□□□□□ -1.62
HLA-CQ95604 AC090049.2-201ENST00000550377 109 ntBASIC4.94□□□□□ -1.62
HLA-CQ95604 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC4.94□□□□□ -1.62
HLA-CQ95604 MIR7853-201ENST00000584820 132 ntBASIC4.94□□□□□ -1.62
HLA-CQ95604 AC006272.2-201ENST00000594725 163 ntBASIC4.94□□□□□ -1.62
HLA-CQ95604 AL391813.1-201ENST00000603098 260 ntBASIC4.94□□□□□ -1.62
HLA-CQ95604 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC4.94□□□□□ -1.62
HLA-CQ95604 AL162713.1-201ENST00000604480 262 ntBASIC4.94□□□□□ -1.62
HLA-CQ95604 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC4.94□□□□□ -1.62
HLA-CQ95604 U3.53-201ENST00000628922 216 ntBASIC4.94□□□□□ -1.62
HLA-CQ95604 SNORD98-201ENST00000636377 67 ntBASIC4.94□□□□□ -1.62
HLA-CQ95604 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC4.94□□□□□ -1.62
HLA-CQ95604 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
HLA-CQ95604 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.94□□□□□ -1.62
HLA-CQ95604 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
HLA-CQ95604 CUL1P1-201ENST00000509510 2425 ntBASIC4.94□□□□□ -1.62
HLA-CQ95604 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
HLA-CQ95604 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
HLA-CQ95604 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC4.93□□□□□ -1.62
HLA-CQ95604 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC4.93□□□□□ -1.62
HLA-CQ95604 RNU6-1298P-201ENST00000362456 101 ntBASIC4.93□□□□□ -1.62
HLA-CQ95604 RNU6-727P-201ENST00000363592 107 ntBASIC4.93□□□□□ -1.62
HLA-CQ95604 RNU6-755P-201ENST00000364400 103 ntBASIC4.93□□□□□ -1.62
HLA-CQ95604 RNA5SP366-201ENST00000365454 123 ntBASIC4.93□□□□□ -1.62
HLA-CQ95604 RNU6-476P-201ENST00000384726 107 ntBASIC4.93□□□□□ -1.62
HLA-CQ95604 Z98745.1-201ENST00000402553 494 ntBASIC4.93□□□□□ -1.62
HLA-CQ95604 AC006461.1-201ENST00000412637 326 ntBASIC4.93□□□□□ -1.62
HLA-CQ95604 AL645608.4-201ENST00000423619 154 ntBASIC4.93□□□□□ -1.62
HLA-CQ95604 AL591419.1-201ENST00000427423 339 ntBASIC4.93□□□□□ -1.62
HLA-CQ95604 TOMM22P2-201ENST00000430735 237 ntBASIC4.93□□□□□ -1.62
HLA-CQ95604 AL135790.2-201ENST00000437701 267 ntBASIC4.93□□□□□ -1.62
HLA-CQ95604 AL357134.1-201ENST00000445848 426 ntBASIC4.93□□□□□ -1.62
HLA-CQ95604 HMGN2P21-201ENST00000447764 270 ntBASIC4.93□□□□□ -1.62
HLA-CQ95604 AL691482.1-201ENST00000453255 87 ntBASIC4.93□□□□□ -1.62
HLA-CQ95604 AC016925.1-201ENST00000458303 298 ntBASIC4.93□□□□□ -1.62
HLA-CQ95604 RPL23AP70-201ENST00000483361 460 ntBASIC4.93□□□□□ -1.62
HLA-CQ95604 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC4.93□□□□□ -1.62
HLA-CQ95604 FCF1P8-201ENST00000510322 597 ntBASIC4.93□□□□□ -1.62
HLA-CQ95604 RAC1P5-201ENST00000512182 576 ntBASIC4.93□□□□□ -1.62
HLA-CQ95604 SNORA72.7-201ENST00000516349 94 ntBASIC4.93□□□□□ -1.62
HLA-CQ95604 RNU6-1007P-201ENST00000516586 107 ntBASIC4.93□□□□□ -1.62
HLA-CQ95604 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC4.93□□□□□ -1.62
HLA-CQ95604 HSPE1P5-201ENST00000561489 272 ntBASIC4.93□□□□□ -1.62
HLA-CQ95604 AC127455.1-201ENST00000565496 145 ntBASIC4.93□□□□□ -1.62
HLA-CQ95604 MIR3923-201ENST00000579521 83 ntBASIC4.93□□□□□ -1.62
HLA-CQ95604 SNORA74C-1-201ENST00000580726 201 ntBASIC4.93□□□□□ -1.62
HLA-CQ95604 SNORD11B-201ENST00000607707 90 ntBASIC4.93□□□□□ -1.62
HLA-CQ95604 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC4.93□□□□□ -1.62
HLA-CQ95604 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC4.93□□□□□ -1.62
HLA-CQ95604 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
HLA-CQ95604 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
HLA-CQ95604 AF127577.6-201ENST00000623352 2191 ntBASIC4.92□□□□□ -1.62
HLA-CQ95604 SNORA73.1-201ENST00000363107 205 ntBASIC4.92□□□□□ -1.62
HLA-CQ95604 Y_RNA.243-201ENST00000364481 109 ntBASIC4.92□□□□□ -1.62
HLA-CQ95604 RNA5SP267-201ENST00000364893 126 ntBASIC4.92□□□□□ -1.62
HLA-CQ95604 RNU6-144P-201ENST00000383951 107 ntBASIC4.92□□□□□ -1.62
HLA-CQ95604 RNY4P18-201ENST00000391107 89 ntBASIC4.92□□□□□ -1.62
HLA-CQ95604 EI24P2-201ENST00000397776 1076 ntBASIC4.92□□□□□ -1.62
HLA-CQ95604 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC4.92□□□□□ -1.62
HLA-CQ95604 RPL19P16-201ENST00000433839 588 ntBASIC4.92□□□□□ -1.62
HLA-CQ95604 RPL23AP93-201ENST00000440847 484 ntBASIC4.92□□□□□ -1.62
HLA-CQ95604 AL121914.1-201ENST00000450188 156 ntBASIC4.92□□□□□ -1.62
HLA-CQ95604 AC146507.2-201ENST00000460608 476 ntBASIC4.92□□□□□ -1.62
HLA-CQ95604 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.92□□□□□ -1.62
HLA-CQ95604 AL591473.1-201ENST00000464297 313 ntBASIC4.92□□□□□ -1.62
HLA-CQ95604 RPL36AP41-201ENST00000493820 306 ntBASIC4.92□□□□□ -1.62
HLA-CQ95604 AIG1P1-201ENST00000503376 148 ntBASIC4.92□□□□□ -1.62
HLA-CQ95604 Y_RNA.712-201ENST00000517011 92 ntBASIC4.92□□□□□ -1.62
HLA-CQ95604 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC4.92□□□□□ -1.62
HLA-CQ95604 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC4.92□□□□□ -1.62
HLA-CQ95604 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC4.92□□□□□ -1.62
HLA-CQ95604 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
HLA-CQ95604 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
HLA-CQ95604 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.92□□□□□ -1.62
HLA-CQ95604 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
HLA-CQ95604 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
HLA-CQ95604 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC4.91□□□□□ -1.62
HLA-CQ95604 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
HLA-CQ95604 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.91□□□□□ -1.62
HLA-CQ95604 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
HLA-CQ95604 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
HLA-CQ95604 U3.15-201ENST00000365398 212 ntBASIC4.91□□□□□ -1.62
HLA-CQ95604 MIR15B-201ENST00000385045 98 ntBASIC4.91□□□□□ -1.62
HLA-CQ95604 MIR195-201ENST00000385194 87 ntBASIC4.91□□□□□ -1.62
HLA-CQ95604 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
HLA-CQ95604 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.91□□□□□ -1.62
HLA-CQ95604 YPEL5P1-201ENST00000419731 367 ntBASIC4.91□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms