Protein–RNA interactions for Protein: Q92994

BRF1, Transcription factor IIIB 90 kDa subunit, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1Q92994 SNORD105B-201ENST00000458770 79 ntBASIC4.11□□□□□ -1.75
BRF1Q92994 U3.44-201ENST00000458938 192 ntBASIC4.11□□□□□ -1.75
BRF1Q92994 RNU7-169P-201ENST00000459456 61 ntBASIC4.11□□□□□ -1.75
BRF1Q92994 S100A11P1-201ENST00000477525 312 ntBASIC4.11□□□□□ -1.75
BRF1Q92994 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC4.11□□□□□ -1.75
BRF1Q92994 RNA5SP468-201ENST00000516782 93 ntBASIC4.11□□□□□ -1.75
BRF1Q92994 RAC1P9-201ENST00000604990 392 ntBASIC4.11□□□□□ -1.75
BRF1Q92994 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC4.11□□□□□ -1.75
BRF1Q92994 AL159153.1-201ENST00000619688 317 ntBASIC4.11□□□□□ -1.75
BRF1Q92994 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC4.11□□□□□ -1.75
BRF1Q92994 CR392039.5-201ENST00000623201 510 ntBASIC4.11□□□□□ -1.75
BRF1Q92994 SCARNA4-202ENST00000625402 129 ntBASIC4.11□□□□□ -1.75
BRF1Q92994 AC012442.3-202ENST00000636742 206 ntBASIC4.11□□□□□ -1.75
BRF1Q92994 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC4.11□□□□□ -1.75
BRF1Q92994 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
BRF1Q92994 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC4.1□□□□□ -1.75
BRF1Q92994 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
BRF1Q92994 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
BRF1Q92994 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
BRF1Q92994 RNU6-227P-201ENST00000362865 103 ntBASIC4.1□□□□□ -1.75
BRF1Q92994 RNU6-428P-201ENST00000362942 107 ntBASIC4.1□□□□□ -1.75
BRF1Q92994 RNU5E-7P-201ENST00000365290 117 ntBASIC4.1□□□□□ -1.75
BRF1Q92994 RNA5SP167-201ENST00000365461 116 ntBASIC4.1□□□□□ -1.75
BRF1Q92994 RNU6-72P-201ENST00000384285 79 ntBASIC4.1□□□□□ -1.75
BRF1Q92994 SNORA51.11-201ENST00000384442 131 ntBASIC4.1□□□□□ -1.75
BRF1Q92994 MIR554-201ENST00000384874 96 ntBASIC4.1□□□□□ -1.75
BRF1Q92994 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
BRF1Q92994 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC4.1□□□□□ -1.75
BRF1Q92994 Y_RNA.592-201ENST00000410274 109 ntBASIC4.1□□□□□ -1.75
BRF1Q92994 CYCSP4-201ENST00000429682 331 ntBASIC4.1□□□□□ -1.75
BRF1Q92994 Z98949.2-201ENST00000440996 144 ntBASIC4.1□□□□□ -1.75
BRF1Q92994 AC010265.1-201ENST00000513509 211 ntBASIC4.1□□□□□ -1.75
BRF1Q92994 AC023632.4-201ENST00000517783 191 ntBASIC4.1□□□□□ -1.75
BRF1Q92994 NDUFB9P3-201ENST00000521269 501 ntBASIC4.1□□□□□ -1.75
BRF1Q92994 IGHV3-76-201ENST00000522465 295 ntBASIC4.1□□□□□ -1.75
BRF1Q92994 AP004242.1-201ENST00000533701 349 ntBASIC4.1□□□□□ -1.75
BRF1Q92994 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC4.1□□□□□ -1.75
BRF1Q92994 AC023157.2-201ENST00000540596 141 ntBASIC4.1□□□□□ -1.75
BRF1Q92994 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC4.1□□□□□ -1.75
BRF1Q92994 AC011373.1-201ENST00000607270 237 ntBASIC4.1□□□□□ -1.75
BRF1Q92994 uc_338.32-201ENST00000615087 172 ntBASIC4.1□□□□□ -1.75
BRF1Q92994 AC243829.7-201ENST00000633081 225 ntBASIC4.1□□□□□ -1.75
BRF1Q92994 AC009093.8-201ENST00000641769 292 ntBASIC4.1□□□□□ -1.75
BRF1Q92994 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC4.1□□□□□ -1.75
BRF1Q92994 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC4.1□□□□□ -1.75
BRF1Q92994 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC4.1□□□□□ -1.75
BRF1Q92994 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC4.1□□□□□ -1.75
BRF1Q92994 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
BRF1Q92994 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC4.09□□□□□ -1.75
BRF1Q92994 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
BRF1Q92994 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC4.09□□□□□ -1.75
BRF1Q92994 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC4.09□□□□□ -1.75
BRF1Q92994 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
BRF1Q92994 Y_RNA.222-201ENST00000364264 102 ntBASIC4.09□□□□□ -1.75
BRF1Q92994 SNORA73.2-201ENST00000364946 201 ntBASIC4.09□□□□□ -1.75
BRF1Q92994 RNU6-140P-201ENST00000384566 108 ntBASIC4.09□□□□□ -1.75
BRF1Q92994 MIR184-201ENST00000384962 84 ntBASIC4.09□□□□□ -1.75
BRF1Q92994 MIR134-201ENST00000385258 73 ntBASIC4.09□□□□□ -1.75
BRF1Q92994 RNA5SP494-201ENST00000410653 129 ntBASIC4.09□□□□□ -1.75
BRF1Q92994 RNA5SP31-201ENST00000411144 127 ntBASIC4.09□□□□□ -1.75
BRF1Q92994 CRYBB2P1-203ENST00000415709 538 ntBASIC4.09□□□□□ -1.75
BRF1Q92994 MTND3P9-201ENST00000429526 346 ntBASIC4.09□□□□□ -1.75
BRF1Q92994 AL357552.1-201ENST00000445254 415 ntBASIC4.09□□□□□ -1.75
BRF1Q92994 AL133547.1-201ENST00000448546 220 ntBASIC4.09□□□□□ -1.75
BRF1Q92994 RN7SKP210-201ENST00000459176 261 ntBASIC4.09□□□□□ -1.75
BRF1Q92994 AL590705.4-201ENST00000532209 134 ntBASIC4.09□□□□□ -1.75
BRF1Q92994 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC4.09□□□□□ -1.75
BRF1Q92994 AC090517.1-201ENST00000569307 266 ntBASIC4.09□□□□□ -1.75
BRF1Q92994 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC4.09□□□□□ -1.75
BRF1Q92994 MIR4425-201ENST00000580572 84 ntBASIC4.09□□□□□ -1.75
BRF1Q92994 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC4.09□□□□□ -1.75
BRF1Q92994 AC005357.1-201ENST00000588399 301 ntBASIC4.09□□□□□ -1.75
BRF1Q92994 RPS29P30-201ENST00000600975 111 ntBASIC4.09□□□□□ -1.75
BRF1Q92994 AL390123.1-201ENST00000603216 237 ntBASIC4.09□□□□□ -1.75
BRF1Q92994 AC110741.2-201ENST00000605278 268 ntBASIC4.09□□□□□ -1.75
BRF1Q92994 DLEU2_2.2-201ENST00000615474 90 ntBASIC4.09□□□□□ -1.75
BRF1Q92994 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
BRF1Q92994 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC4.09□□□□□ -1.75
BRF1Q92994 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC4.09□□□□□ -1.76
BRF1Q92994 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
BRF1Q92994 OR56A5-201ENST00000340110 738 ntBASIC4.08□□□□□ -1.76
BRF1Q92994 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
BRF1Q92994 MIR30E-201ENST00000362104 92 ntBASIC4.08□□□□□ -1.76
BRF1Q92994 RNU6-600P-201ENST00000362524 99 ntBASIC4.08□□□□□ -1.76
BRF1Q92994 RNU6-770P-201ENST00000363929 105 ntBASIC4.08□□□□□ -1.76
BRF1Q92994 Y_RNA.257-201ENST00000364596 102 ntBASIC4.08□□□□□ -1.76
BRF1Q92994 RNU6-336P-201ENST00000364891 107 ntBASIC4.08□□□□□ -1.76
BRF1Q92994 RNU6-217P-201ENST00000384164 104 ntBASIC4.08□□□□□ -1.76
BRF1Q92994 Y_RNA.447-201ENST00000384184 113 ntBASIC4.08□□□□□ -1.76
BRF1Q92994 Y_RNA.461-201ENST00000384263 103 ntBASIC4.08□□□□□ -1.76
BRF1Q92994 MIR1302-6-201ENST00000408466 90 ntBASIC4.08□□□□□ -1.76
BRF1Q92994 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC4.08□□□□□ -1.76
BRF1Q92994 AL356968.1-201ENST00000416622 474 ntBASIC4.08□□□□□ -1.76
BRF1Q92994 NDUFB4P6-201ENST00000436819 366 ntBASIC4.08□□□□□ -1.76
BRF1Q92994 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC4.08□□□□□ -1.76
BRF1Q92994 AC106707.2-201ENST00000484182 374 ntBASIC4.08□□□□□ -1.76
BRF1Q92994 AC020593.1-201ENST00000507399 299 ntBASIC4.08□□□□□ -1.76
BRF1Q92994 RNU6-388P-201ENST00000517012 105 ntBASIC4.08□□□□□ -1.76
BRF1Q92994 RNU6-389P-201ENST00000517048 105 ntBASIC4.08□□□□□ -1.76
BRF1Q92994 AC034114.1-201ENST00000520293 285 ntBASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 122.5 ms