Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 AC021205.2-201ENST00000480069 347 ntBASIC3.83□□□□□ -1.8
ERCC4Q92889 AC068781.1-201ENST00000488231 618 ntBASIC3.83□□□□□ -1.8
ERCC4Q92889 AC022447.4-201ENST00000504053 364 ntBASIC3.83□□□□□ -1.8
ERCC4Q92889 RNU1-95P-201ENST00000516357 160 ntBASIC3.83□□□□□ -1.8
ERCC4Q92889 RNU6-764P-201ENST00000516396 105 ntBASIC3.83□□□□□ -1.8
ERCC4Q92889 RNU1-128P-201ENST00000516704 160 ntBASIC3.83□□□□□ -1.8
ERCC4Q92889 RNU6-572P-201ENST00000516724 80 ntBASIC3.83□□□□□ -1.8
ERCC4Q92889 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.83□□□□□ -1.8
ERCC4Q92889 GNAI2P1-201ENST00000541815 315 ntBASIC3.83□□□□□ -1.8
ERCC4Q92889 AC005476.1-201ENST00000554427 397 ntBASIC3.83□□□□□ -1.8
ERCC4Q92889 AC010653.1-201ENST00000571108 881 ntBASIC3.83□□□□□ -1.8
ERCC4Q92889 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.83□□□□□ -1.8
ERCC4Q92889 U2.21-201ENST00000637295 81 ntBASIC3.83□□□□□ -1.8
ERCC4Q92889 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.83□□□□□ -1.8
ERCC4Q92889 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.83□□□□□ -1.8
ERCC4Q92889 AF117829.1-206ENST00000621883 3802 ntBASIC3.83□□□□□ -1.8
ERCC4Q92889 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
ERCC4Q92889 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
ERCC4Q92889 AC090740.1-201ENST00000623193 2262 ntBASIC3.82□□□□□ -1.8
ERCC4Q92889 ZBTB8OSP1-201ENST00000342688 498 ntBASIC3.82□□□□□ -1.8
ERCC4Q92889 MIR568-201ENST00000385036 95 ntBASIC3.82□□□□□ -1.8
ERCC4Q92889 AC126124.2-201ENST00000413542 321 ntBASIC3.82□□□□□ -1.8
ERCC4Q92889 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC3.82□□□□□ -1.8
ERCC4Q92889 MRPS18CP6-201ENST00000423587 223 ntBASIC3.82□□□□□ -1.8
ERCC4Q92889 GOT2P5-201ENST00000433995 546 ntBASIC3.82□□□□□ -1.8
ERCC4Q92889 HMGN2P20-201ENST00000437531 273 ntBASIC3.82□□□□□ -1.8
ERCC4Q92889 AC099799.1-201ENST00000439809 192 ntBASIC3.82□□□□□ -1.8
ERCC4Q92889 IPO7P1-201ENST00000442031 636 ntBASIC3.82□□□□□ -1.8
ERCC4Q92889 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC3.82□□□□□ -1.8
ERCC4Q92889 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC3.82□□□□□ -1.8
ERCC4Q92889 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.82□□□□□ -1.8
ERCC4Q92889 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC3.82□□□□□ -1.8
ERCC4Q92889 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.82□□□□□ -1.8
ERCC4Q92889 SLC25A15P5-201ENST00000508033 253 ntBASIC3.82□□□□□ -1.8
ERCC4Q92889 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC3.82□□□□□ -1.8
ERCC4Q92889 RNU6-475P-201ENST00000516073 104 ntBASIC3.82□□□□□ -1.8
ERCC4Q92889 CASP1P1-201ENST00000526345 212 ntBASIC3.82□□□□□ -1.8
ERCC4Q92889 AP000889.1-201ENST00000530968 660 ntBASIC3.82□□□□□ -1.8
ERCC4Q92889 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.82□□□□□ -1.8
ERCC4Q92889 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC3.82□□□□□ -1.8
ERCC4Q92889 HMGB1P14-201ENST00000557424 591 ntBASIC3.82□□□□□ -1.8
ERCC4Q92889 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.82□□□□□ -1.8
ERCC4Q92889 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC3.82□□□□□ -1.8
ERCC4Q92889 MIR3671-201ENST00000580455 88 ntBASIC3.82□□□□□ -1.8
ERCC4Q92889 AC005014.2-201ENST00000607795 599 ntBASIC3.82□□□□□ -1.8
ERCC4Q92889 AL161629.2-201ENST00000615347 275 ntBASIC3.82□□□□□ -1.8
ERCC4Q92889 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.82□□□□□ -1.8
ERCC4Q92889 AL162373.1-201ENST00000620433 407 ntBASIC3.82□□□□□ -1.8
ERCC4Q92889 7SK.10-201ENST00000621414 298 ntBASIC3.82□□□□□ -1.8
ERCC4Q92889 MPP6-209ENST00000625307 126 ntTSL 5 BASIC3.82□□□□□ -1.8
ERCC4Q92889 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
ERCC4Q92889 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.82□□□□□ -1.8
ERCC4Q92889 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
ERCC4Q92889 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
ERCC4Q92889 DYNLT3P1-201ENST00000378574 347 ntBASIC3.81□□□□□ -1.8
ERCC4Q92889 SNORA5A-201ENST00000384111 134 ntBASIC3.81□□□□□ -1.8
ERCC4Q92889 RNU6-140P-201ENST00000384566 108 ntBASIC3.81□□□□□ -1.8
ERCC4Q92889 AL591034.2-201ENST00000402839 359 ntBASIC3.81□□□□□ -1.8
ERCC4Q92889 AL513475.1-201ENST00000406602 315 ntBASIC3.81□□□□□ -1.8
ERCC4Q92889 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
ERCC4Q92889 AC093151.1-201ENST00000427711 313 ntBASIC3.81□□□□□ -1.8
ERCC4Q92889 AL353705.1-201ENST00000433468 480 ntBASIC3.81□□□□□ -1.8
ERCC4Q92889 AC092573.2-201ENST00000434546 243 ntBASIC3.81□□□□□ -1.8
ERCC4Q92889 HMGN1P18-201ENST00000457642 277 ntBASIC3.81□□□□□ -1.8
ERCC4Q92889 RPL17P19-201ENST00000489069 552 ntBASIC3.81□□□□□ -1.8
ERCC4Q92889 ACA59.1-201ENST00000515966 143 ntBASIC3.81□□□□□ -1.8
ERCC4Q92889 RNU4-77P-201ENST00000516692 156 ntBASIC3.81□□□□□ -1.8
ERCC4Q92889 RNU6-264P-201ENST00000517134 104 ntBASIC3.81□□□□□ -1.8
ERCC4Q92889 AC109479.2-201ENST00000517842 174 ntBASIC3.81□□□□□ -1.8
ERCC4Q92889 AC107934.2-201ENST00000518653 310 ntBASIC3.81□□□□□ -1.8
ERCC4Q92889 MIR4444-1-201ENST00000581696 74 ntBASIC3.81□□□□□ -1.8
ERCC4Q92889 MIR4444-2-201ENST00000584390 74 ntBASIC3.81□□□□□ -1.8
ERCC4Q92889 AC092447.9-201ENST00000603395 144 ntBASIC3.81□□□□□ -1.8
ERCC4Q92889 AC009314.1-201ENST00000603871 304 ntBASIC3.81□□□□□ -1.8
ERCC4Q92889 AC104695.3-201ENST00000604052 296 ntBASIC3.81□□□□□ -1.8
ERCC4Q92889 AC018889.1-201ENST00000605372 397 ntBASIC3.81□□□□□ -1.8
ERCC4Q92889 FTX_3.1-201ENST00000610451 147 ntBASIC3.81□□□□□ -1.8
ERCC4Q92889 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.81□□□□□ -1.8
ERCC4Q92889 AC022336.2-201ENST00000568966 2538 ntBASIC3.81□□□□□ -1.8
ERCC4Q92889 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.81□□□□□ -1.8
ERCC4Q92889 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
ERCC4Q92889 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.8□□□□□ -1.8
ERCC4Q92889 MTND5P1-201ENST00000445440 1375 ntBASIC3.8□□□□□ -1.8
ERCC4Q92889 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
ERCC4Q92889 RPL9P7-201ENST00000330965 580 ntBASIC3.8□□□□□ -1.8
ERCC4Q92889 FTLP6-201ENST00000355274 422 ntBASIC3.8□□□□□ -1.8
ERCC4Q92889 RNU6-1317P-201ENST00000364582 104 ntBASIC3.8□□□□□ -1.8
ERCC4Q92889 RNU6-827P-201ENST00000365553 106 ntBASIC3.8□□□□□ -1.8
ERCC4Q92889 RNU6-790P-201ENST00000384479 105 ntBASIC3.8□□□□□ -1.8
ERCC4Q92889 MIR325-201ENST00000385260 98 ntBASIC3.8□□□□□ -1.8
ERCC4Q92889 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
ERCC4Q92889 Y_RNA.605-201ENST00000410577 105 ntBASIC3.8□□□□□ -1.8
ERCC4Q92889 HMGB3P2-201ENST00000411913 584 ntBASIC3.8□□□□□ -1.8
ERCC4Q92889 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.8□□□□□ -1.8
ERCC4Q92889 MTCYBP9-201ENST00000431021 303 ntBASIC3.8□□□□□ -1.8
ERCC4Q92889 RPS15AP10-201ENST00000432472 382 ntBASIC3.8□□□□□ -1.8
ERCC4Q92889 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC3.8□□□□□ -1.8
ERCC4Q92889 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC3.8□□□□□ -1.8
ERCC4Q92889 AL513043.1-201ENST00000439124 535 ntBASIC3.8□□□□□ -1.8
ERCC4Q92889 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 163.1 ms