Protein–RNA interactions for Protein: Q8WWA1

TMEM40, Transmembrane protein 40, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM40Q8WWA1 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC4.27□□□□□ -1.73
TMEM40Q8WWA1 ZNF192P1-203ENST00000565888 810 ntBASIC4.27□□□□□ -1.73
TMEM40Q8WWA1 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.27□□□□□ -1.73
TMEM40Q8WWA1 MIR5696-201ENST00000578474 85 ntBASIC4.27□□□□□ -1.73
TMEM40Q8WWA1 BRDTP1-201ENST00000605735 677 ntBASIC4.27□□□□□ -1.73
TMEM40Q8WWA1 AC091895.1-201ENST00000624494 256 ntBASIC4.27□□□□□ -1.73
TMEM40Q8WWA1 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC4.27□□□□□ -1.73
TMEM40Q8WWA1 MAPK10-320ENST00000641462 6696 ntBASIC4.27□□□□□ -1.73
TMEM40Q8WWA1 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
TMEM40Q8WWA1 RBBP8P1-201ENST00000449447 1844 ntBASIC4.27□□□□□ -1.73
TMEM40Q8WWA1 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
TMEM40Q8WWA1 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
TMEM40Q8WWA1 AC118273.1-201ENST00000525324 3006 ntBASIC4.27□□□□□ -1.73
TMEM40Q8WWA1 HSP90AA4P-202ENST00000506915 2228 ntBASIC4.26□□□□□ -1.73
TMEM40Q8WWA1 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.26□□□□□ -1.73
TMEM40Q8WWA1 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
TMEM40Q8WWA1 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.26□□□□□ -1.73
TMEM40Q8WWA1 RNU6-923P-201ENST00000364753 107 ntBASIC4.26□□□□□ -1.73
TMEM40Q8WWA1 RNA5SP97-201ENST00000365006 84 ntBASIC4.26□□□□□ -1.73
TMEM40Q8WWA1 SNORA5A-201ENST00000384111 134 ntBASIC4.26□□□□□ -1.73
TMEM40Q8WWA1 RNU6-72P-201ENST00000384285 79 ntBASIC4.26□□□□□ -1.73
TMEM40Q8WWA1 RNU6-131P-201ENST00000391144 107 ntBASIC4.26□□□□□ -1.73
TMEM40Q8WWA1 RPL21P75-201ENST00000396599 483 ntBASIC4.26□□□□□ -1.73
TMEM40Q8WWA1 RPL21P28-201ENST00000401418 483 ntBASIC4.26□□□□□ -1.73
TMEM40Q8WWA1 RPL19P1-201ENST00000411635 428 ntBASIC4.26□□□□□ -1.73
TMEM40Q8WWA1 RPL23AP36-201ENST00000413895 458 ntBASIC4.26□□□□□ -1.73
TMEM40Q8WWA1 AL590556.1-201ENST00000423231 483 ntBASIC4.26□□□□□ -1.73
TMEM40Q8WWA1 AC092047.1-201ENST00000424997 240 ntBASIC4.26□□□□□ -1.73
TMEM40Q8WWA1 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.26□□□□□ -1.73
TMEM40Q8WWA1 HSPE1P25-201ENST00000455484 251 ntBASIC4.26□□□□□ -1.73
TMEM40Q8WWA1 RPL21P11-201ENST00000461458 483 ntBASIC4.26□□□□□ -1.73
TMEM40Q8WWA1 RPL21P39-201ENST00000463605 483 ntBASIC4.26□□□□□ -1.73
TMEM40Q8WWA1 AC132942.1-201ENST00000486753 483 ntBASIC4.26□□□□□ -1.73
TMEM40Q8WWA1 RN7SL271P-201ENST00000487601 295 ntBASIC4.26□□□□□ -1.73
TMEM40Q8WWA1 AC093591.1-201ENST00000491435 481 ntBASIC4.26□□□□□ -1.73
TMEM40Q8WWA1 RPL21P16-201ENST00000495531 483 ntBASIC4.26□□□□□ -1.73
TMEM40Q8WWA1 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC4.26□□□□□ -1.73
TMEM40Q8WWA1 RNY3P16-201ENST00000516338 101 ntBASIC4.26□□□□□ -1.73
TMEM40Q8WWA1 RNA5SP468-201ENST00000516782 93 ntBASIC4.26□□□□□ -1.73
TMEM40Q8WWA1 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC4.26□□□□□ -1.73
TMEM40Q8WWA1 CYP4A43P-201ENST00000568156 121 ntBASIC4.26□□□□□ -1.73
TMEM40Q8WWA1 MIR7154-201ENST00000620673 73 ntBASIC4.26□□□□□ -1.73
TMEM40Q8WWA1 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC4.26□□□□□ -1.73
TMEM40Q8WWA1 AL773545.4-201ENST00000637262 310 ntBASIC4.26□□□□□ -1.73
TMEM40Q8WWA1 AL513478.4-201ENST00000641636 310 ntBASIC4.26□□□□□ -1.73
TMEM40Q8WWA1 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
TMEM40Q8WWA1 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
TMEM40Q8WWA1 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
TMEM40Q8WWA1 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC4.26□□□□□ -1.73
TMEM40Q8WWA1 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
TMEM40Q8WWA1 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.25□□□□□ -1.73
TMEM40Q8WWA1 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
TMEM40Q8WWA1 SNORA31-201ENST00000362607 130 ntBASIC4.25□□□□□ -1.73
TMEM40Q8WWA1 RNU6-78P-201ENST00000362897 107 ntBASIC4.25□□□□□ -1.73
TMEM40Q8WWA1 U3.13-201ENST00000364804 214 ntBASIC4.25□□□□□ -1.73
TMEM40Q8WWA1 RNU6-215P-201ENST00000365169 102 ntBASIC4.25□□□□□ -1.73
TMEM40Q8WWA1 RNU6-290P-201ENST00000365212 101 ntBASIC4.25□□□□□ -1.73
TMEM40Q8WWA1 RNU6-1130P-201ENST00000365434 107 ntBASIC4.25□□□□□ -1.73
TMEM40Q8WWA1 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
TMEM40Q8WWA1 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
TMEM40Q8WWA1 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC4.25□□□□□ -1.73
TMEM40Q8WWA1 MIR1251-201ENST00000408552 70 ntBASIC4.25□□□□□ -1.73
TMEM40Q8WWA1 SNORA3C-201ENST00000408792 125 ntBASIC4.25□□□□□ -1.73
TMEM40Q8WWA1 RNA5SP129-201ENST00000410276 118 ntBASIC4.25□□□□□ -1.73
TMEM40Q8WWA1 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC4.25□□□□□ -1.73
TMEM40Q8WWA1 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC4.25□□□□□ -1.73
TMEM40Q8WWA1 AL591419.1-201ENST00000427423 339 ntBASIC4.25□□□□□ -1.73
TMEM40Q8WWA1 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC4.25□□□□□ -1.73
TMEM40Q8WWA1 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.25□□□□□ -1.73
TMEM40Q8WWA1 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC4.25□□□□□ -1.73
TMEM40Q8WWA1 AL356535.1-201ENST00000440335 398 ntBASIC4.25□□□□□ -1.73
TMEM40Q8WWA1 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.25□□□□□ -1.73
TMEM40Q8WWA1 AL133162.1-201ENST00000463228 453 ntBASIC4.25□□□□□ -1.73
TMEM40Q8WWA1 AC140059.1-201ENST00000489238 361 ntBASIC4.25□□□□□ -1.73
TMEM40Q8WWA1 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC4.25□□□□□ -1.73
TMEM40Q8WWA1 AC025554.1-201ENST00000505641 188 ntBASIC4.25□□□□□ -1.73
TMEM40Q8WWA1 RNU6-1219P-201ENST00000516143 112 ntBASIC4.25□□□□□ -1.73
TMEM40Q8WWA1 AC026403.1-201ENST00000518938 295 ntBASIC4.25□□□□□ -1.73
TMEM40Q8WWA1 AP004242.1-201ENST00000533701 349 ntBASIC4.25□□□□□ -1.73
TMEM40Q8WWA1 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC4.25□□□□□ -1.73
TMEM40Q8WWA1 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC4.25□□□□□ -1.73
TMEM40Q8WWA1 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.25□□□□□ -1.73
TMEM40Q8WWA1 AC005046.1-201ENST00000608515 625 ntBASIC4.25□□□□□ -1.73
TMEM40Q8WWA1 AC009318.2-201ENST00000610917 651 ntBASIC4.25□□□□□ -1.73
TMEM40Q8WWA1 AC011476.5-201ENST00000615594 130 ntBASIC4.25□□□□□ -1.73
TMEM40Q8WWA1 U4.7-201ENST00000638126 106 ntBASIC4.25□□□□□ -1.73
TMEM40Q8WWA1 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
TMEM40Q8WWA1 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
TMEM40Q8WWA1 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
TMEM40Q8WWA1 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.25□□□□□ -1.73
TMEM40Q8WWA1 AC106871.1-201ENST00000568324 3102 ntBASIC4.24□□□□□ -1.73
TMEM40Q8WWA1 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
TMEM40Q8WWA1 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
TMEM40Q8WWA1 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.24□□□□□ -1.73
TMEM40Q8WWA1 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
TMEM40Q8WWA1 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
TMEM40Q8WWA1 NEAT1-202ENST00000501122 22743 ntBASIC4.24□□□□□ -1.73
TMEM40Q8WWA1 FTLP6-201ENST00000355274 422 ntBASIC4.24□□□□□ -1.73
TMEM40Q8WWA1 RNU6-227P-201ENST00000362865 103 ntBASIC4.24□□□□□ -1.73
TMEM40Q8WWA1 U3.6-201ENST00000363622 211 ntBASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 112 ms