Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 AC025281.1-201ENST00000567026 265 ntBASIC2.85□□□□□ -1.95
SNED1Q8TER0 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC2.85□□□□□ -1.95
SNED1Q8TER0 AC105224.1-201ENST00000587055 421 ntBASIC2.85□□□□□ -1.95
SNED1Q8TER0 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC2.85□□□□□ -1.95
SNED1Q8TER0 AC106900.2-201ENST00000604994 317 ntBASIC2.85□□□□□ -1.95
SNED1Q8TER0 AC245517.5-201ENST00000611529 162 ntBASIC2.85□□□□□ -1.95
SNED1Q8TER0 AL596245.1-201ENST00000618994 362 ntBASIC2.85□□□□□ -1.95
SNED1Q8TER0 AL133216.2-202ENST00000634512 349 ntBASIC2.85□□□□□ -1.95
SNED1Q8TER0 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.84□□□□□ -1.95
SNED1Q8TER0 AC009902.3-201ENST00000606235 2172 ntBASIC2.84□□□□□ -1.95
SNED1Q8TER0 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
SNED1Q8TER0 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
SNED1Q8TER0 Y_RNA.367-201ENST00000365544 101 ntBASIC2.84□□□□□ -1.96
SNED1Q8TER0 Y_RNA.422-201ENST00000384054 114 ntBASIC2.84□□□□□ -1.96
SNED1Q8TER0 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.84□□□□□ -1.96
SNED1Q8TER0 RPS4XP3-201ENST00000398541 413 ntBASIC2.84□□□□□ -1.96
SNED1Q8TER0 MIR548P-201ENST00000408336 84 ntBASIC2.84□□□□□ -1.96
SNED1Q8TER0 MTCO2P27-201ENST00000420740 428 ntBASIC2.84□□□□□ -1.96
SNED1Q8TER0 GPM6BP2-201ENST00000432046 144 ntBASIC2.84□□□□□ -1.96
SNED1Q8TER0 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC2.84□□□□□ -1.96
SNED1Q8TER0 GPM6BP1-201ENST00000446387 144 ntBASIC2.84□□□□□ -1.96
SNED1Q8TER0 AC027575.1-201ENST00000481064 460 ntBASIC2.84□□□□□ -1.96
SNED1Q8TER0 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC2.84□□□□□ -1.96
SNED1Q8TER0 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC2.84□□□□□ -1.96
SNED1Q8TER0 AC011979.2-201ENST00000527568 352 ntBASIC2.84□□□□□ -1.96
SNED1Q8TER0 OR5BN1P-201ENST00000532955 829 ntBASIC2.84□□□□□ -1.96
SNED1Q8TER0 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC2.84□□□□□ -1.96
SNED1Q8TER0 FRG2DP-202ENST00000566967 323 ntBASIC2.84□□□□□ -1.96
SNED1Q8TER0 AC021646.1-201ENST00000605469 484 ntBASIC2.84□□□□□ -1.96
SNED1Q8TER0 AL121655.1-201ENST00000605811 308 ntBASIC2.84□□□□□ -1.96
SNED1Q8TER0 AC084781.2-201ENST00000615568 161 ntBASIC2.84□□□□□ -1.96
SNED1Q8TER0 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2.84□□□□□ -1.96
SNED1Q8TER0 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC2.84□□□□□ -1.96
SNED1Q8TER0 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
SNED1Q8TER0 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.83□□□□□ -1.96
SNED1Q8TER0 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC2.83□□□□□ -1.96
SNED1Q8TER0 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC2.83□□□□□ -1.96
SNED1Q8TER0 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC2.83□□□□□ -1.96
SNED1Q8TER0 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.83□□□□□ -1.96
SNED1Q8TER0 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
SNED1Q8TER0 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
SNED1Q8TER0 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.83□□□□□ -1.96
SNED1Q8TER0 MIR369-201ENST00000362155 70 ntBASIC2.83□□□□□ -1.96
SNED1Q8TER0 Y_RNA.4-201ENST00000362333 112 ntBASIC2.83□□□□□ -1.96
SNED1Q8TER0 Y_RNA.100-201ENST00000363141 102 ntBASIC2.83□□□□□ -1.96
SNED1Q8TER0 RNU6-474P-201ENST00000384243 107 ntBASIC2.83□□□□□ -1.96
SNED1Q8TER0 RNU6-43P-201ENST00000384302 107 ntBASIC2.83□□□□□ -1.96
SNED1Q8TER0 MIR454-201ENST00000390180 115 ntBASIC2.83□□□□□ -1.96
SNED1Q8TER0 U8.13-201ENST00000390842 128 ntBASIC2.83□□□□□ -1.96
SNED1Q8TER0 AL023284.1-201ENST00000403956 276 ntBASIC2.83□□□□□ -1.96
SNED1Q8TER0 AL606923.1-201ENST00000406616 190 ntBASIC2.83□□□□□ -1.96
SNED1Q8TER0 SSXP9-201ENST00000417503 292 ntBASIC2.83□□□□□ -1.96
SNED1Q8TER0 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC2.83□□□□□ -1.96
SNED1Q8TER0 BEND7P1-201ENST00000422058 457 ntBASIC2.83□□□□□ -1.96
SNED1Q8TER0 GTF2IP13-201ENST00000438487 386 ntBASIC2.83□□□□□ -1.96
SNED1Q8TER0 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC2.83□□□□□ -1.96
SNED1Q8TER0 RAC1P7-201ENST00000445367 377 ntBASIC2.83□□□□□ -1.96
SNED1Q8TER0 GSTA11P-201ENST00000452866 669 ntBASIC2.83□□□□□ -1.96
SNED1Q8TER0 RNU7-182P-201ENST00000459009 62 ntBASIC2.83□□□□□ -1.96
SNED1Q8TER0 AC091179.1-201ENST00000461606 579 ntBASIC2.83□□□□□ -1.96
SNED1Q8TER0 MTND4P17-201ENST00000470444 350 ntBASIC2.83□□□□□ -1.96
SNED1Q8TER0 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2.83□□□□□ -1.96
SNED1Q8TER0 CKS1BP2-201ENST00000497342 240 ntBASIC2.83□□□□□ -1.96
SNED1Q8TER0 AC091885.1-201ENST00000506658 268 ntBASIC2.83□□□□□ -1.96
SNED1Q8TER0 RN7SKP219-201ENST00000516825 296 ntBASIC2.83□□□□□ -1.96
SNED1Q8TER0 MGST1-215ENST00000540056 546 ntTSL 3 BASIC2.83□□□□□ -1.96
SNED1Q8TER0 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC2.83□□□□□ -1.96
SNED1Q8TER0 AC012443.1-201ENST00000605605 231 ntBASIC2.83□□□□□ -1.96
SNED1Q8TER0 AL121992.2-201ENST00000606262 256 ntBASIC2.83□□□□□ -1.96
SNED1Q8TER0 AL355802.3-201ENST00000607571 545 ntBASIC2.83□□□□□ -1.96
SNED1Q8TER0 AC004908.2-201ENST00000609090 574 ntBASIC2.83□□□□□ -1.96
SNED1Q8TER0 AC040896.1-201ENST00000613819 479 ntBASIC2.83□□□□□ -1.96
SNED1Q8TER0 uc_338.15-201ENST00000615470 191 ntBASIC2.83□□□□□ -1.96
SNED1Q8TER0 AC008121.3-201ENST00000618726 433 ntBASIC2.83□□□□□ -1.96
SNED1Q8TER0 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.82□□□□□ -1.96
SNED1Q8TER0 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.82□□□□□ -1.96
SNED1Q8TER0 ZNF355P-201ENST00000427301 3216 ntBASIC2.82□□□□□ -1.96
SNED1Q8TER0 HSPE1P11-201ENST00000339579 310 ntBASIC2.82□□□□□ -1.96
SNED1Q8TER0 RNU6-254P-201ENST00000363377 107 ntBASIC2.82□□□□□ -1.96
SNED1Q8TER0 Y_RNA.202-201ENST00000364083 110 ntBASIC2.82□□□□□ -1.96
SNED1Q8TER0 Y_RNA.216-201ENST00000364205 93 ntBASIC2.82□□□□□ -1.96
SNED1Q8TER0 SNORA63C-201ENST00000364578 129 ntBASIC2.82□□□□□ -1.96
SNED1Q8TER0 SNORA4.3-201ENST00000365564 137 ntBASIC2.82□□□□□ -1.96
SNED1Q8TER0 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
SNED1Q8TER0 RNU6-38P-201ENST00000384085 107 ntBASIC2.82□□□□□ -1.96
SNED1Q8TER0 SNORA41-201ENST00000384675 132 ntBASIC2.82□□□□□ -1.96
SNED1Q8TER0 MIR19A-201ENST00000384878 82 ntBASIC2.82□□□□□ -1.96
SNED1Q8TER0 MIR558-201ENST00000384920 94 ntBASIC2.82□□□□□ -1.96
SNED1Q8TER0 RNU6-903P-201ENST00000391270 109 ntBASIC2.82□□□□□ -1.96
SNED1Q8TER0 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC2.82□□□□□ -1.96
SNED1Q8TER0 RNA5SP38-201ENST00000410750 119 ntBASIC2.82□□□□□ -1.96
SNED1Q8TER0 RNU6-193P-201ENST00000410977 107 ntBASIC2.82□□□□□ -1.96
SNED1Q8TER0 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC2.82□□□□□ -1.96
SNED1Q8TER0 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC2.82□□□□□ -1.96
SNED1Q8TER0 AC079780.1-201ENST00000428259 207 ntBASIC2.82□□□□□ -1.96
SNED1Q8TER0 AC092427.1-202ENST00000430569 476 ntBASIC2.82□□□□□ -1.96
SNED1Q8TER0 MTATP6P16-201ENST00000434543 526 ntBASIC2.82□□□□□ -1.96
SNED1Q8TER0 TRAPPC2P3-201ENST00000443200 321 ntBASIC2.82□□□□□ -1.96
SNED1Q8TER0 AC108059.3-201ENST00000456388 214 ntBASIC2.82□□□□□ -1.96
SNED1Q8TER0 RNU6-333P-201ENST00000459117 107 ntBASIC2.82□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 131.4 ms