Protein–RNA interactions for Protein: Q8TEQ0

SNX29, Sorting nexin-29, humanhuman

Predictions only

Length 813 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29Q8TEQ0 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
SNX29Q8TEQ0 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.46□□□□□ -1.69
SNX29Q8TEQ0 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.46□□□□□ -1.7
SNX29Q8TEQ0 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC4.46□□□□□ -1.7
SNX29Q8TEQ0 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
SNX29Q8TEQ0 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
SNX29Q8TEQ0 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
SNX29Q8TEQ0 RNU6-50P-201ENST00000362356 103 ntBASIC4.46□□□□□ -1.7
SNX29Q8TEQ0 RNU4-90P-201ENST00000362773 141 ntBASIC4.46□□□□□ -1.7
SNX29Q8TEQ0 Y_RNA.180-201ENST00000363867 113 ntBASIC4.46□□□□□ -1.7
SNX29Q8TEQ0 RN7SKP280-201ENST00000364196 304 ntBASIC4.46□□□□□ -1.7
SNX29Q8TEQ0 MIR708-201ENST00000390708 88 ntBASIC4.46□□□□□ -1.7
SNX29Q8TEQ0 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC4.46□□□□□ -1.7
SNX29Q8TEQ0 EIF1P2-201ENST00000428233 350 ntBASIC4.46□□□□□ -1.7
SNX29Q8TEQ0 AC016700.2-201ENST00000446011 156 ntBASIC4.46□□□□□ -1.7
SNX29Q8TEQ0 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC4.46□□□□□ -1.7
SNX29Q8TEQ0 AL162151.2-201ENST00000448875 158 ntBASIC4.46□□□□□ -1.7
SNX29Q8TEQ0 AL136097.1-201ENST00000456945 913 ntBASIC4.46□□□□□ -1.7
SNX29Q8TEQ0 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC4.46□□□□□ -1.7
SNX29Q8TEQ0 BTF3L4P4-201ENST00000506381 449 ntBASIC4.46□□□□□ -1.7
SNX29Q8TEQ0 RNA5SP179-201ENST00000517284 121 ntBASIC4.46□□□□□ -1.7
SNX29Q8TEQ0 IGHVII-62-1-201ENST00000519283 235 ntBASIC4.46□□□□□ -1.7
SNX29Q8TEQ0 MIR4697-201ENST00000582977 78 ntBASIC4.46□□□□□ -1.7
SNX29Q8TEQ0 AC091167.4-201ENST00000605079 184 ntBASIC4.46□□□□□ -1.7
SNX29Q8TEQ0 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
SNX29Q8TEQ0 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.45□□□□□ -1.7
SNX29Q8TEQ0 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
SNX29Q8TEQ0 SNORD56.1-201ENST00000362913 68 ntBASIC4.45□□□□□ -1.7
SNX29Q8TEQ0 RNA5SP189-201ENST00000364920 115 ntBASIC4.45□□□□□ -1.7
SNX29Q8TEQ0 RFX3-203ENST00000381984 364 ntTSL 3 BASIC4.45□□□□□ -1.7
SNX29Q8TEQ0 RNU6-318P-201ENST00000384283 103 ntBASIC4.45□□□□□ -1.7
SNX29Q8TEQ0 RNU6-541P-201ENST00000384709 110 ntBASIC4.45□□□□□ -1.7
SNX29Q8TEQ0 RNU1-139P-201ENST00000391307 165 ntBASIC4.45□□□□□ -1.7
SNX29Q8TEQ0 AL139156.1-201ENST00000412785 841 ntBASIC4.45□□□□□ -1.7
SNX29Q8TEQ0 AC004975.1-201ENST00000428733 208 ntBASIC4.45□□□□□ -1.7
SNX29Q8TEQ0 AL117339.2-201ENST00000430475 180 ntBASIC4.45□□□□□ -1.7
SNX29Q8TEQ0 AC091390.1-201ENST00000433904 331 ntBASIC4.45□□□□□ -1.7
SNX29Q8TEQ0 AC007389.2-201ENST00000434630 306 ntBASIC4.45□□□□□ -1.7
SNX29Q8TEQ0 AC104332.1-201ENST00000440471 797 ntBASIC4.45□□□□□ -1.7
SNX29Q8TEQ0 HSPE1P25-201ENST00000455484 251 ntBASIC4.45□□□□□ -1.7
SNX29Q8TEQ0 SNRPGP7-201ENST00000469016 106 ntBASIC4.45□□□□□ -1.7
SNX29Q8TEQ0 MED28P2-201ENST00000475771 317 ntBASIC4.45□□□□□ -1.7
SNX29Q8TEQ0 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC4.45□□□□□ -1.7
SNX29Q8TEQ0 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC4.45□□□□□ -1.7
SNX29Q8TEQ0 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.45□□□□□ -1.7
SNX29Q8TEQ0 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC4.44□□□□□ -1.7
SNX29Q8TEQ0 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.44□□□□□ -1.7
SNX29Q8TEQ0 AC022336.2-201ENST00000568966 2538 ntBASIC4.44□□□□□ -1.7
SNX29Q8TEQ0 LINC02471-203ENST00000641941 4752 ntBASIC4.44□□□□□ -1.7
SNX29Q8TEQ0 RNA5SP361-201ENST00000362686 118 ntBASIC4.44□□□□□ -1.7
SNX29Q8TEQ0 Y_RNA.83-201ENST00000363005 113 ntBASIC4.44□□□□□ -1.7
SNX29Q8TEQ0 RNU6-884P-201ENST00000363889 107 ntBASIC4.44□□□□□ -1.7
SNX29Q8TEQ0 SNORA29-201ENST00000384183 140 ntBASIC4.44□□□□□ -1.7
SNX29Q8TEQ0 RPS4XP3-201ENST00000398541 413 ntBASIC4.44□□□□□ -1.7
SNX29Q8TEQ0 AL033519.2-201ENST00000403958 392 ntBASIC4.44□□□□□ -1.7
SNX29Q8TEQ0 Y_RNA.793-201ENST00000411222 111 ntBASIC4.44□□□□□ -1.7
SNX29Q8TEQ0 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC4.44□□□□□ -1.7
SNX29Q8TEQ0 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC4.44□□□□□ -1.7
SNX29Q8TEQ0 AC005002.2-201ENST00000438228 269 ntBASIC4.44□□□□□ -1.7
SNX29Q8TEQ0 AC083863.1-201ENST00000438811 231 ntBASIC4.44□□□□□ -1.7
SNX29Q8TEQ0 AL353748.1-201ENST00000440753 474 ntBASIC4.44□□□□□ -1.7
SNX29Q8TEQ0 HMGB3P8-201ENST00000449709 577 ntBASIC4.44□□□□□ -1.7
SNX29Q8TEQ0 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.44□□□□□ -1.7
SNX29Q8TEQ0 AC005921.1-201ENST00000510589 286 ntBASIC4.44□□□□□ -1.7
SNX29Q8TEQ0 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC4.44□□□□□ -1.7
SNX29Q8TEQ0 AC019159.1-201ENST00000605094 187 ntBASIC4.44□□□□□ -1.7
SNX29Q8TEQ0 MIR6500-201ENST00000622700 86 ntBASIC4.44□□□□□ -1.7
SNX29Q8TEQ0 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.44□□□□□ -1.7
SNX29Q8TEQ0 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.44□□□□□ -1.7
SNX29Q8TEQ0 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
SNX29Q8TEQ0 ZNF826P-207ENST00000622273 1910 ntBASIC4.44□□□□□ -1.7
SNX29Q8TEQ0 USP8P1-201ENST00000494673 3183 ntBASIC4.44□□□□□ -1.7
SNX29Q8TEQ0 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.44□□□□□ -1.7
SNX29Q8TEQ0 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
SNX29Q8TEQ0 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
SNX29Q8TEQ0 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
SNX29Q8TEQ0 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
SNX29Q8TEQ0 RNU6-858P-201ENST00000362436 107 ntBASIC4.43□□□□□ -1.7
SNX29Q8TEQ0 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.43□□□□□ -1.7
SNX29Q8TEQ0 SNORD32A-201ENST00000364805 84 ntBASIC4.43□□□□□ -1.7
SNX29Q8TEQ0 RNU1-100P-201ENST00000365255 165 ntBASIC4.43□□□□□ -1.7
SNX29Q8TEQ0 RNU6-142P-201ENST00000384019 107 ntBASIC4.43□□□□□ -1.7
SNX29Q8TEQ0 SNORD63-201ENST00000384262 68 ntBASIC4.43□□□□□ -1.7
SNX29Q8TEQ0 SNORA53-201ENST00000391141 249 ntBASIC4.43□□□□□ -1.7
SNX29Q8TEQ0 RPL23AP48-201ENST00000406913 488 ntBASIC4.43□□□□□ -1.7
SNX29Q8TEQ0 RNA5SP129-201ENST00000410276 118 ntBASIC4.43□□□□□ -1.7
SNX29Q8TEQ0 SNORD12B-201ENST00000410433 91 ntBASIC4.43□□□□□ -1.7
SNX29Q8TEQ0 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC4.43□□□□□ -1.7
SNX29Q8TEQ0 HMGB1P37-201ENST00000439613 609 ntBASIC4.43□□□□□ -1.7
SNX29Q8TEQ0 AP000873.1-201ENST00000463987 400 ntBASIC4.43□□□□□ -1.7
SNX29Q8TEQ0 AC023141.12-201ENST00000512399 199 ntBASIC4.43□□□□□ -1.7
SNX29Q8TEQ0 RNA5SP468-201ENST00000516782 93 ntBASIC4.43□□□□□ -1.7
SNX29Q8TEQ0 MIR2116-201ENST00000517221 80 ntBASIC4.43□□□□□ -1.7
SNX29Q8TEQ0 YPEL5P3-201ENST00000547227 352 ntBASIC4.43□□□□□ -1.7
SNX29Q8TEQ0 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC4.43□□□□□ -1.7
SNX29Q8TEQ0 MIR6134-201ENST00000617606 109 ntBASIC4.43□□□□□ -1.7
SNX29Q8TEQ0 RNA5SP196-201ENST00000625967 102 ntBASIC4.43□□□□□ -1.7
SNX29Q8TEQ0 Clostridiales-1.2-201ENST00000636724 160 ntBASIC4.43□□□□□ -1.7
SNX29Q8TEQ0 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.43□□□□□ -1.7
SNX29Q8TEQ0 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms