Protein–RNA interactions for Protein: Q8NDV3

SMC1B, Structural maintenance of chromosomes protein 1B, humanhuman

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1BQ8NDV3 RPL26P27-201ENST00000414397 437 ntBASIC3.91□□□□□ -1.78
SMC1BQ8NDV3 AF228730.4-201ENST00000421457 183 ntBASIC3.91□□□□□ -1.78
SMC1BQ8NDV3 SNRPEP4-201ENST00000435815 279 ntBASIC3.91□□□□□ -1.78
SMC1BQ8NDV3 MTATP6P7-201ENST00000453315 681 ntBASIC3.91□□□□□ -1.78
SMC1BQ8NDV3 AC093249.1-201ENST00000567049 203 ntBASIC3.91□□□□□ -1.78
SMC1BQ8NDV3 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.91□□□□□ -1.78
SMC1BQ8NDV3 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC3.91□□□□□ -1.78
SMC1BQ8NDV3 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC3.91□□□□□ -1.78
SMC1BQ8NDV3 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
SMC1BQ8NDV3 AC080078.3-201ENST00000605407 463 ntBASIC3.91□□□□□ -1.78
SMC1BQ8NDV3 AC123912.5-201ENST00000605470 343 ntBASIC3.91□□□□□ -1.78
SMC1BQ8NDV3 RNU6-6P-201ENST00000606623 107 ntBASIC3.91□□□□□ -1.78
SMC1BQ8NDV3 AL627309.6-201ENST00000606857 840 ntBASIC3.91□□□□□ -1.78
SMC1BQ8NDV3 MIR6076-201ENST00000617521 113 ntBASIC3.91□□□□□ -1.78
SMC1BQ8NDV3 Z69720.2-201ENST00000624755 279 ntBASIC3.91□□□□□ -1.78
SMC1BQ8NDV3 U6.98-201ENST00000637157 84 ntBASIC3.91□□□□□ -1.78
SMC1BQ8NDV3 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
SMC1BQ8NDV3 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
SMC1BQ8NDV3 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
SMC1BQ8NDV3 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.91□□□□□ -1.78
SMC1BQ8NDV3 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.9□□□□□ -1.78
SMC1BQ8NDV3 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.78
SMC1BQ8NDV3 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.78
SMC1BQ8NDV3 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.9□□□□□ -1.78
SMC1BQ8NDV3 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
SMC1BQ8NDV3 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.9□□□□□ -1.78
SMC1BQ8NDV3 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.9□□□□□ -1.79
SMC1BQ8NDV3 AC062016.1-201ENST00000355719 319 ntBASIC3.9□□□□□ -1.79
SMC1BQ8NDV3 RNU6-658P-201ENST00000384606 106 ntBASIC3.9□□□□□ -1.79
SMC1BQ8NDV3 RNU6-1304P-201ENST00000411374 106 ntBASIC3.9□□□□□ -1.79
SMC1BQ8NDV3 AL513477.1-202ENST00000417061 214 ntBASIC3.9□□□□□ -1.79
SMC1BQ8NDV3 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC3.9□□□□□ -1.79
SMC1BQ8NDV3 AL353729.1-201ENST00000425044 720 ntBASIC3.9□□□□□ -1.79
SMC1BQ8NDV3 MRPS31P2-201ENST00000451581 518 ntBASIC3.9□□□□□ -1.79
SMC1BQ8NDV3 RPL30P15-201ENST00000457129 321 ntBASIC3.9□□□□□ -1.79
SMC1BQ8NDV3 snoU13.26-201ENST00000459452 105 ntBASIC3.9□□□□□ -1.79
SMC1BQ8NDV3 AC006445.2-201ENST00000510061 472 ntBASIC3.9□□□□□ -1.79
SMC1BQ8NDV3 RN7SKP209-201ENST00000516888 304 ntBASIC3.9□□□□□ -1.79
SMC1BQ8NDV3 RNU6-703P-201ENST00000516946 107 ntBASIC3.9□□□□□ -1.79
SMC1BQ8NDV3 Y_RNA.708-201ENST00000516950 96 ntBASIC3.9□□□□□ -1.79
SMC1BQ8NDV3 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC3.9□□□□□ -1.79
SMC1BQ8NDV3 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC3.9□□□□□ -1.79
SMC1BQ8NDV3 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC3.9□□□□□ -1.79
SMC1BQ8NDV3 AL163153.1-201ENST00000554223 283 ntBASIC3.9□□□□□ -1.79
SMC1BQ8NDV3 AMZ2P1-203ENST00000565833 850 ntBASIC3.9□□□□□ -1.79
SMC1BQ8NDV3 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.9□□□□□ -1.79
SMC1BQ8NDV3 MIR4425-201ENST00000580572 84 ntBASIC3.9□□□□□ -1.79
SMC1BQ8NDV3 MIR3609-201ENST00000582661 80 ntBASIC3.9□□□□□ -1.79
SMC1BQ8NDV3 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.9□□□□□ -1.79
SMC1BQ8NDV3 AC008121.1-201ENST00000603244 268 ntBASIC3.9□□□□□ -1.79
SMC1BQ8NDV3 CYP2C61P-201ENST00000604072 290 ntBASIC3.9□□□□□ -1.79
SMC1BQ8NDV3 AC019193.3-201ENST00000609144 554 ntBASIC3.9□□□□□ -1.79
SMC1BQ8NDV3 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC3.9□□□□□ -1.79
SMC1BQ8NDV3 AL161423.1-201ENST00000613700 262 ntBASIC3.9□□□□□ -1.79
SMC1BQ8NDV3 AL157817.1-201ENST00000614264 790 ntBASIC3.9□□□□□ -1.79
SMC1BQ8NDV3 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.79
SMC1BQ8NDV3 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
SMC1BQ8NDV3 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
SMC1BQ8NDV3 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
SMC1BQ8NDV3 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.89□□□□□ -1.79
SMC1BQ8NDV3 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.89□□□□□ -1.79
SMC1BQ8NDV3 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
SMC1BQ8NDV3 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.89□□□□□ -1.79
SMC1BQ8NDV3 Y_RNA.146-201ENST00000363549 102 ntBASIC3.89□□□□□ -1.79
SMC1BQ8NDV3 SNORA71.1-201ENST00000364523 117 ntBASIC3.89□□□□□ -1.79
SMC1BQ8NDV3 Y_RNA.394-201ENST00000383942 103 ntBASIC3.89□□□□□ -1.79
SMC1BQ8NDV3 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.89□□□□□ -1.79
SMC1BQ8NDV3 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.89□□□□□ -1.79
SMC1BQ8NDV3 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC3.89□□□□□ -1.79
SMC1BQ8NDV3 AC105272.1-201ENST00000438604 198 ntBASIC3.89□□□□□ -1.79
SMC1BQ8NDV3 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.89□□□□□ -1.79
SMC1BQ8NDV3 AL031274.1-201ENST00000450334 232 ntBASIC3.89□□□□□ -1.79
SMC1BQ8NDV3 RNU7-152P-201ENST00000458982 64 ntBASIC3.89□□□□□ -1.79
SMC1BQ8NDV3 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.89□□□□□ -1.79
SMC1BQ8NDV3 AC109479.2-201ENST00000517842 174 ntBASIC3.89□□□□□ -1.79
SMC1BQ8NDV3 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.89□□□□□ -1.79
SMC1BQ8NDV3 AC124303.1-201ENST00000605703 360 ntBASIC3.89□□□□□ -1.79
SMC1BQ8NDV3 AC098657.3-201ENST00000620434 263 ntBASIC3.89□□□□□ -1.79
SMC1BQ8NDV3 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC3.89□□□□□ -1.79
SMC1BQ8NDV3 AC073308.1-201ENST00000623696 305 ntBASIC3.89□□□□□ -1.79
SMC1BQ8NDV3 AL669831.3-213ENST00000636676 183 ntBASIC3.89□□□□□ -1.79
SMC1BQ8NDV3 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
SMC1BQ8NDV3 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC3.89□□□□□ -1.79
SMC1BQ8NDV3 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
SMC1BQ8NDV3 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
SMC1BQ8NDV3 RNU6-884P-201ENST00000363889 107 ntBASIC3.88□□□□□ -1.79
SMC1BQ8NDV3 Y_RNA.187-201ENST00000363918 113 ntBASIC3.88□□□□□ -1.79
SMC1BQ8NDV3 RNU1-73P-201ENST00000383971 164 ntBASIC3.88□□□□□ -1.79
SMC1BQ8NDV3 SNORA7.4-201ENST00000384249 137 ntBASIC3.88□□□□□ -1.79
SMC1BQ8NDV3 SNORA75.4-201ENST00000391278 119 ntBASIC3.88□□□□□ -1.79
SMC1BQ8NDV3 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
SMC1BQ8NDV3 MORN2-203ENST00000409131 544 ntTSL 5 BASIC3.88□□□□□ -1.79
SMC1BQ8NDV3 Z99755.1-201ENST00000414048 380 ntBASIC3.88□□□□□ -1.79
SMC1BQ8NDV3 RPL21P40-201ENST00000428586 483 ntBASIC3.88□□□□□ -1.79
SMC1BQ8NDV3 AC022018.1-201ENST00000430685 241 ntBASIC3.88□□□□□ -1.79
SMC1BQ8NDV3 AL139132.1-201ENST00000431587 344 ntBASIC3.88□□□□□ -1.79
SMC1BQ8NDV3 RPS15AP10-201ENST00000432472 382 ntBASIC3.88□□□□□ -1.79
SMC1BQ8NDV3 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC3.88□□□□□ -1.79
SMC1BQ8NDV3 HIGD1AP11-201ENST00000438361 280 ntBASIC3.88□□□□□ -1.79
SMC1BQ8NDV3 AL590664.1-201ENST00000448065 339 ntBASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms