Protein–RNA interactions for Protein: Q8N998

CCDC89, Coiled-coil domain-containing protein 89, humanhuman

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC89Q8N998 AC109479.2-201ENST00000517842 174 ntBASIC2.57□□□□□ -2
CCDC89Q8N998 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.57□□□□□ -2
CCDC89Q8N998 AP003392.2-201ENST00000527269 208 ntBASIC2.57□□□□□ -2
CCDC89Q8N998 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.57□□□□□ -2
CCDC89Q8N998 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC2.57□□□□□ -2
CCDC89Q8N998 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC2.57□□□□□ -2
CCDC89Q8N998 AC022418.1-201ENST00000624118 445 ntBASIC2.57□□□□□ -2
CCDC89Q8N998 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.57□□□□□ -2
CCDC89Q8N998 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.56□□□□□ -2
CCDC89Q8N998 MIR208A-201ENST00000362287 71 ntBASIC2.56□□□□□ -2
CCDC89Q8N998 RNU6-37P-201ENST00000362692 107 ntBASIC2.56□□□□□ -2
CCDC89Q8N998 RNU6-11P-201ENST00000364234 107 ntBASIC2.56□□□□□ -2
CCDC89Q8N998 RNU6-7-201ENST00000364784 107 ntBASIC2.56□□□□□ -2
CCDC89Q8N998 RNU6-8-201ENST00000365467 107 ntBASIC2.56□□□□□ -2
CCDC89Q8N998 RNU6-25P-201ENST00000383873 107 ntBASIC2.56□□□□□ -2
CCDC89Q8N998 RNU6-1-201ENST00000383898 107 ntBASIC2.56□□□□□ -2
CCDC89Q8N998 RNU6-48P-201ENST00000384161 107 ntBASIC2.56□□□□□ -2
CCDC89Q8N998 RNU6-36P-201ENST00000384172 107 ntBASIC2.56□□□□□ -2
CCDC89Q8N998 RNU6-4P-201ENST00000384205 107 ntBASIC2.56□□□□□ -2
CCDC89Q8N998 RNU6-5P-201ENST00000384238 107 ntBASIC2.56□□□□□ -2
CCDC89Q8N998 RNU6-611P-201ENST00000384276 104 ntBASIC2.56□□□□□ -2
CCDC89Q8N998 RNU6-3P-201ENST00000384314 107 ntBASIC2.56□□□□□ -2
CCDC89Q8N998 RNU6-16P-201ENST00000384385 107 ntBASIC2.56□□□□□ -2
CCDC89Q8N998 RNU6-15P-201ENST00000384534 107 ntBASIC2.56□□□□□ -2
CCDC89Q8N998 RNU6-2-201ENST00000384627 107 ntBASIC2.56□□□□□ -2
CCDC89Q8N998 RNU6-29P-201ENST00000384637 107 ntBASIC2.56□□□□□ -2
CCDC89Q8N998 SNORA41-201ENST00000384675 132 ntBASIC2.56□□□□□ -2
CCDC89Q8N998 RNU6-9-201ENST00000384776 107 ntBASIC2.56□□□□□ -2
CCDC89Q8N998 RNU6-33P-201ENST00000384793 107 ntBASIC2.56□□□□□ -2
CCDC89Q8N998 RNU2-29P-201ENST00000410423 189 ntBASIC2.56□□□□□ -2
CCDC89Q8N998 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC2.56□□□□□ -2
CCDC89Q8N998 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC2.56□□□□□ -2
CCDC89Q8N998 ARL5AP4-201ENST00000430731 512 ntBASIC2.56□□□□□ -2
CCDC89Q8N998 MTCO2P11-201ENST00000431069 680 ntBASIC2.56□□□□□ -2
CCDC89Q8N998 AL358934.1-201ENST00000432346 324 ntBASIC2.56□□□□□ -2
CCDC89Q8N998 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.56□□□□□ -2
CCDC89Q8N998 AC107083.1-201ENST00000439643 279 ntBASIC2.56□□□□□ -2
CCDC89Q8N998 USP9YP29-201ENST00000445112 563 ntBASIC2.56□□□□□ -2
CCDC89Q8N998 PRPS1P1-201ENST00000445305 876 ntBASIC2.56□□□□□ -2
CCDC89Q8N998 AP000936.2-201ENST00000447151 681 ntBASIC2.56□□□□□ -2
CCDC89Q8N998 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC2.56□□□□□ -2
CCDC89Q8N998 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC2.56□□□□□ -2
CCDC89Q8N998 RPL23AP45-201ENST00000476406 468 ntBASIC2.56□□□□□ -2
CCDC89Q8N998 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.56□□□□□ -2
CCDC89Q8N998 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.56□□□□□ -2
CCDC89Q8N998 MTND2P33-201ENST00000506452 1031 ntBASIC2.56□□□□□ -2
CCDC89Q8N998 AC117532.1-201ENST00000514638 323 ntBASIC2.56□□□□□ -2
CCDC89Q8N998 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC2.56□□□□□ -2
CCDC89Q8N998 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC2.56□□□□□ -2
CCDC89Q8N998 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC2.56□□□□□ -2
CCDC89Q8N998 MIR4528-201ENST00000577763 90 ntBASIC2.56□□□□□ -2
CCDC89Q8N998 RNU6-6P-201ENST00000606623 107 ntBASIC2.56□□□□□ -2
CCDC89Q8N998 OR2AS2P-201ENST00000606902 342 ntBASIC2.56□□□□□ -2
CCDC89Q8N998 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC2.56□□□□□ -2
CCDC89Q8N998 U4.3-201ENST00000621047 82 ntBASIC2.56□□□□□ -2
CCDC89Q8N998 AC092608.2-201ENST00000624427 218 ntBASIC2.56□□□□□ -2
CCDC89Q8N998 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
CCDC89Q8N998 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.56□□□□□ -2
CCDC89Q8N998 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
CCDC89Q8N998 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
CCDC89Q8N998 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
CCDC89Q8N998 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.55□□□□□ -2
CCDC89Q8N998 MIR544A-201ENST00000384855 91 ntBASIC2.55□□□□□ -2
CCDC89Q8N998 MIR17-201ENST00000385012 84 ntBASIC2.55□□□□□ -2
CCDC89Q8N998 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.55□□□□□ -2
CCDC89Q8N998 SNORD70.1-201ENST00000391007 85 ntBASIC2.55□□□□□ -2
CCDC89Q8N998 RNU2-9P-201ENST00000410194 145 ntBASIC2.55□□□□□ -2
CCDC89Q8N998 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.55□□□□□ -2
CCDC89Q8N998 MORF4L1P6-201ENST00000418771 268 ntBASIC2.55□□□□□ -2
CCDC89Q8N998 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.55□□□□□ -2
CCDC89Q8N998 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC2.55□□□□□ -2
CCDC89Q8N998 MTND4P32-201ENST00000437189 1237 ntBASIC2.55□□□□□ -2
CCDC89Q8N998 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC2.55□□□□□ -2
CCDC89Q8N998 GPM6BP3-201ENST00000442797 145 ntBASIC2.55□□□□□ -2
CCDC89Q8N998 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC2.55□□□□□ -2
CCDC89Q8N998 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.55□□□□□ -2
CCDC89Q8N998 AL118520.1-201ENST00000450770 291 ntBASIC2.55□□□□□ -2
CCDC89Q8N998 AC098826.2-201ENST00000452011 651 ntBASIC2.55□□□□□ -2
CCDC89Q8N998 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.55□□□□□ -2
CCDC89Q8N998 AL353752.1-201ENST00000454946 260 ntBASIC2.55□□□□□ -2
CCDC89Q8N998 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC2.55□□□□□ -2
CCDC89Q8N998 RNU6-956P-201ENST00000458868 103 ntBASIC2.55□□□□□ -2
CCDC89Q8N998 HMGB1P35-201ENST00000503360 598 ntBASIC2.55□□□□□ -2
CCDC89Q8N998 AC092436.1-201ENST00000506450 503 ntBASIC2.55□□□□□ -2
CCDC89Q8N998 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.55□□□□□ -2
CCDC89Q8N998 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC2.55□□□□□ -2
CCDC89Q8N998 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC2.55□□□□□ -2
CCDC89Q8N998 RN7SKP132-201ENST00000516001 208 ntBASIC2.55□□□□□ -2
CCDC89Q8N998 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.55□□□□□ -2
CCDC89Q8N998 AC026407.1-201ENST00000518369 204 ntBASIC2.55□□□□□ -2
CCDC89Q8N998 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.55□□□□□ -2
CCDC89Q8N998 AC115990.1-201ENST00000526957 301 ntBASIC2.55□□□□□ -2
CCDC89Q8N998 AC023050.3-201ENST00000541142 333 ntBASIC2.55□□□□□ -2
CCDC89Q8N998 MIR3200-201ENST00000580767 85 ntBASIC2.55□□□□□ -2
CCDC89Q8N998 AC078795.2-201ENST00000602835 1252 ntBASIC2.55□□□□□ -2
CCDC89Q8N998 AC025449.1-201ENST00000603896 529 ntBASIC2.55□□□□□ -2
CCDC89Q8N998 AC008536.2-201ENST00000607284 349 ntBASIC2.55□□□□□ -2
CCDC89Q8N998 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.55□□□□□ -2
CCDC89Q8N998 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.55□□□□□ -2
CCDC89Q8N998 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 118.7 ms