Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 RPLP0P7-201ENST00000416050 667 ntBASIC3.11□□□□□ -1.91
HERC6Q8IVU3 AC009161.1-201ENST00000417306 376 ntBASIC3.11□□□□□ -1.91
HERC6Q8IVU3 ARL5AP4-201ENST00000430731 512 ntBASIC3.11□□□□□ -1.91
HERC6Q8IVU3 RPL23AP58-201ENST00000440453 469 ntBASIC3.11□□□□□ -1.91
HERC6Q8IVU3 AC010095.1-201ENST00000443543 144 ntBASIC3.11□□□□□ -1.91
HERC6Q8IVU3 AL513328.1-201ENST00000446460 224 ntBASIC3.11□□□□□ -1.91
HERC6Q8IVU3 MTND4P18-201ENST00000447010 465 ntBASIC3.11□□□□□ -1.91
HERC6Q8IVU3 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.11□□□□□ -1.91
HERC6Q8IVU3 NFU1P2-201ENST00000448700 469 ntBASIC3.11□□□□□ -1.91
HERC6Q8IVU3 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC3.11□□□□□ -1.91
HERC6Q8IVU3 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.11□□□□□ -1.91
HERC6Q8IVU3 RNU5F-8P-201ENST00000515941 111 ntBASIC3.11□□□□□ -1.91
HERC6Q8IVU3 RNU6-237P-201ENST00000515985 71 ntBASIC3.11□□□□□ -1.91
HERC6Q8IVU3 Y_RNA.687-201ENST00000516558 91 ntBASIC3.11□□□□□ -1.91
HERC6Q8IVU3 ACA59.2-201ENST00000517061 156 ntBASIC3.11□□□□□ -1.91
HERC6Q8IVU3 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC3.11□□□□□ -1.91
HERC6Q8IVU3 AC020895.1-201ENST00000595362 272 ntBASIC3.11□□□□□ -1.91
HERC6Q8IVU3 VN1R80P-201ENST00000597126 338 ntBASIC3.11□□□□□ -1.91
HERC6Q8IVU3 AC008121.1-201ENST00000603244 268 ntBASIC3.11□□□□□ -1.91
HERC6Q8IVU3 AP000787.2-201ENST00000604432 568 ntBASIC3.11□□□□□ -1.91
HERC6Q8IVU3 RNU6-89P-201ENST00000606519 100 ntBASIC3.11□□□□□ -1.91
HERC6Q8IVU3 uc_338.14-201ENST00000613162 166 ntBASIC3.11□□□□□ -1.91
HERC6Q8IVU3 AL590808.1-201ENST00000618696 141 ntBASIC3.11□□□□□ -1.91
HERC6Q8IVU3 AC103705.1-201ENST00000619013 241 ntBASIC3.11□□□□□ -1.91
HERC6Q8IVU3 AC002064.3-201ENST00000623448 346 ntBASIC3.11□□□□□ -1.91
HERC6Q8IVU3 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.11□□□□□ -1.91
HERC6Q8IVU3 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
HERC6Q8IVU3 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
HERC6Q8IVU3 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
HERC6Q8IVU3 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
HERC6Q8IVU3 MTND5P19-201ENST00000424872 1794 ntBASIC3.1□□□□□ -1.91
HERC6Q8IVU3 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC3.1□□□□□ -1.91
HERC6Q8IVU3 RNU6-859P-201ENST00000362728 107 ntBASIC3.1□□□□□ -1.91
HERC6Q8IVU3 RNU6-266P-201ENST00000364225 107 ntBASIC3.1□□□□□ -1.91
HERC6Q8IVU3 RNU5E-7P-201ENST00000365290 117 ntBASIC3.1□□□□□ -1.91
HERC6Q8IVU3 RNY3P14-201ENST00000384309 102 ntBASIC3.1□□□□□ -1.91
HERC6Q8IVU3 RNU6-1106P-201ENST00000390845 107 ntBASIC3.1□□□□□ -1.91
HERC6Q8IVU3 MIR887-201ENST00000401258 79 ntBASIC3.1□□□□□ -1.91
HERC6Q8IVU3 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.1□□□□□ -1.91
HERC6Q8IVU3 AC245054.2-201ENST00000415639 319 ntBASIC3.1□□□□□ -1.91
HERC6Q8IVU3 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.1□□□□□ -1.91
HERC6Q8IVU3 MTND4LP11-201ENST00000422184 280 ntBASIC3.1□□□□□ -1.91
HERC6Q8IVU3 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC3.1□□□□□ -1.91
HERC6Q8IVU3 AC244505.4-201ENST00000434905 287 ntBASIC3.1□□□□□ -1.91
HERC6Q8IVU3 SSXP5-201ENST00000443473 287 ntBASIC3.1□□□□□ -1.91
HERC6Q8IVU3 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC3.1□□□□□ -1.91
HERC6Q8IVU3 UQCRHP3-201ENST00000451503 251 ntBASIC3.1□□□□□ -1.91
HERC6Q8IVU3 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC3.1□□□□□ -1.91
HERC6Q8IVU3 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC3.1□□□□□ -1.91
HERC6Q8IVU3 RNU6-1208P-201ENST00000459588 107 ntBASIC3.1□□□□□ -1.91
HERC6Q8IVU3 CCDC34P1-201ENST00000507441 517 ntBASIC3.1□□□□□ -1.91
HERC6Q8IVU3 AC008413.1-201ENST00000511864 177 ntBASIC3.1□□□□□ -1.91
HERC6Q8IVU3 MRPS36P2-201ENST00000512569 299 ntBASIC3.1□□□□□ -1.91
HERC6Q8IVU3 SNORA14.1-201ENST00000516113 141 ntBASIC3.1□□□□□ -1.91
HERC6Q8IVU3 AC109479.2-201ENST00000517842 174 ntBASIC3.1□□□□□ -1.91
HERC6Q8IVU3 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC3.1□□□□□ -1.91
HERC6Q8IVU3 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC3.1□□□□□ -1.91
HERC6Q8IVU3 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.1□□□□□ -1.91
HERC6Q8IVU3 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC3.1□□□□□ -1.91
HERC6Q8IVU3 AC078814.3-201ENST00000553036 491 ntBASIC3.1□□□□□ -1.91
HERC6Q8IVU3 AC090115.3-201ENST00000553218 849 ntBASIC3.1□□□□□ -1.91
HERC6Q8IVU3 AL670379.10-201ENST00000604330 253 ntBASIC3.1□□□□□ -1.91
HERC6Q8IVU3 AL670379.9-201ENST00000605428 253 ntBASIC3.1□□□□□ -1.91
HERC6Q8IVU3 AC092807.2-201ENST00000609367 243 ntBASIC3.1□□□□□ -1.91
HERC6Q8IVU3 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
HERC6Q8IVU3 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
HERC6Q8IVU3 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC3.1□□□□□ -1.91
HERC6Q8IVU3 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC3.1□□□□□ -1.91
HERC6Q8IVU3 MIR3662-201ENST00000637030 95 ntBASIC3.1□□□□□ -1.91
HERC6Q8IVU3 MIR3529-201ENST00000637713 78 ntBASIC3.1□□□□□ -1.91
HERC6Q8IVU3 AC024614.3-201ENST00000637860 256 ntBASIC3.1□□□□□ -1.91
HERC6Q8IVU3 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.1□□□□□ -1.91
HERC6Q8IVU3 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
HERC6Q8IVU3 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC3.09□□□□□ -1.91
HERC6Q8IVU3 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.09□□□□□ -1.91
HERC6Q8IVU3 Y_RNA.88-201ENST00000363029 99 ntBASIC3.09□□□□□ -1.91
HERC6Q8IVU3 RNU6-1303P-201ENST00000364841 107 ntBASIC3.09□□□□□ -1.91
HERC6Q8IVU3 RNU4-20P-201ENST00000365601 151 ntBASIC3.09□□□□□ -1.91
HERC6Q8IVU3 RNU6-1083P-201ENST00000384022 107 ntBASIC3.09□□□□□ -1.91
HERC6Q8IVU3 MIR9-1-201ENST00000385198 89 ntBASIC3.09□□□□□ -1.91
HERC6Q8IVU3 EIF4E2P1-201ENST00000393781 255 ntBASIC3.09□□□□□ -1.91
HERC6Q8IVU3 AL512633.1-201ENST00000399931 655 ntBASIC3.09□□□□□ -1.91
HERC6Q8IVU3 MORN2-203ENST00000409131 544 ntTSL 5 BASIC3.09□□□□□ -1.91
HERC6Q8IVU3 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC3.09□□□□□ -1.91
HERC6Q8IVU3 AL096701.2-201ENST00000416920 238 ntBASIC3.09□□□□□ -1.91
HERC6Q8IVU3 SRIP2-201ENST00000428470 166 ntBASIC3.09□□□□□ -1.91
HERC6Q8IVU3 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC3.09□□□□□ -1.91
HERC6Q8IVU3 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC3.09□□□□□ -1.91
HERC6Q8IVU3 RPS29P25-201ENST00000481709 171 ntBASIC3.09□□□□□ -1.91
HERC6Q8IVU3 MRPL42P6-201ENST00000486397 371 ntBASIC3.09□□□□□ -1.91
HERC6Q8IVU3 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
HERC6Q8IVU3 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC3.09□□□□□ -1.91
HERC6Q8IVU3 RNU6-1038P-201ENST00000516516 104 ntBASIC3.09□□□□□ -1.91
HERC6Q8IVU3 SCARNA11.3-201ENST00000517276 130 ntBASIC3.09□□□□□ -1.91
HERC6Q8IVU3 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC3.09□□□□□ -1.91
HERC6Q8IVU3 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.09□□□□□ -1.91
HERC6Q8IVU3 AC010186.2-204ENST00000537668 439 ntBASIC3.09□□□□□ -1.91
HERC6Q8IVU3 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC3.09□□□□□ -1.91
HERC6Q8IVU3 AC009163.5-201ENST00000575421 637 ntBASIC3.09□□□□□ -1.91
HERC6Q8IVU3 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms