Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC1.85□□□□□ -2.11
NUDCD3Q8IVD9 AC000111.3-201ENST00000433478 193 ntBASIC1.85□□□□□ -2.11
NUDCD3Q8IVD9 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.85□□□□□ -2.11
NUDCD3Q8IVD9 AL353689.1-201ENST00000438895 199 ntBASIC1.85□□□□□ -2.11
NUDCD3Q8IVD9 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
NUDCD3Q8IVD9 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.85□□□□□ -2.11
NUDCD3Q8IVD9 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.85□□□□□ -2.11
NUDCD3Q8IVD9 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.85□□□□□ -2.11
NUDCD3Q8IVD9 AL133217.1-201ENST00000450980 425 ntBASIC1.85□□□□□ -2.11
NUDCD3Q8IVD9 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC1.85□□□□□ -2.11
NUDCD3Q8IVD9 ART2BP-201ENST00000453501 499 ntBASIC1.85□□□□□ -2.11
NUDCD3Q8IVD9 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC1.85□□□□□ -2.11
NUDCD3Q8IVD9 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC1.85□□□□□ -2.11
NUDCD3Q8IVD9 AP001025.1-201ENST00000486139 332 ntBASIC1.85□□□□□ -2.11
NUDCD3Q8IVD9 AC018868.1-201ENST00000491307 315 ntBASIC1.85□□□□□ -2.11
NUDCD3Q8IVD9 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC1.85□□□□□ -2.11
NUDCD3Q8IVD9 AC116562.3-201ENST00000506136 177 ntBASIC1.85□□□□□ -2.11
NUDCD3Q8IVD9 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
NUDCD3Q8IVD9 AC091965.2-201ENST00000512324 613 ntBASIC1.85□□□□□ -2.11
NUDCD3Q8IVD9 RNU2-53P-201ENST00000516257 147 ntBASIC1.85□□□□□ -2.11
NUDCD3Q8IVD9 Vault.3-201ENST00000516676 95 ntBASIC1.85□□□□□ -2.11
NUDCD3Q8IVD9 RNU6-685P-201ENST00000517088 95 ntBASIC1.85□□□□□ -2.11
NUDCD3Q8IVD9 SNORA31.23-201ENST00000517219 133 ntBASIC1.85□□□□□ -2.11
NUDCD3Q8IVD9 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC1.85□□□□□ -2.11
NUDCD3Q8IVD9 AC068587.5-201ENST00000528506 175 ntBASIC1.85□□□□□ -2.11
NUDCD3Q8IVD9 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC1.85□□□□□ -2.11
NUDCD3Q8IVD9 AL512310.1-201ENST00000548639 172 ntBASIC1.85□□□□□ -2.11
NUDCD3Q8IVD9 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC1.85□□□□□ -2.11
NUDCD3Q8IVD9 MIR4299-201ENST00000577899 72 ntBASIC1.85□□□□□ -2.11
NUDCD3Q8IVD9 MIR3915-201ENST00000578518 97 ntBASIC1.85□□□□□ -2.11
NUDCD3Q8IVD9 AC090578.1-201ENST00000604955 591 ntBASIC1.85□□□□□ -2.11
NUDCD3Q8IVD9 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC1.85□□□□□ -2.11
NUDCD3Q8IVD9 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC1.85□□□□□ -2.11
NUDCD3Q8IVD9 AC008250.2-201ENST00000615261 205 ntBASIC1.85□□□□□ -2.11
NUDCD3Q8IVD9 AC008121.3-201ENST00000618726 433 ntBASIC1.85□□□□□ -2.11
NUDCD3Q8IVD9 AL603839.4-201ENST00000624658 1005 ntBASIC1.85□□□□□ -2.11
NUDCD3Q8IVD9 SCARNA4-202ENST00000625402 129 ntBASIC1.85□□□□□ -2.11
NUDCD3Q8IVD9 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC1.85□□□□□ -2.11
NUDCD3Q8IVD9 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
NUDCD3Q8IVD9 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
NUDCD3Q8IVD9 HAUS6P2-201ENST00000433254 2404 ntBASIC1.85□□□□□ -2.11
NUDCD3Q8IVD9 RNU6-487P-201ENST00000365430 104 ntBASIC1.84□□□□□ -2.11
NUDCD3Q8IVD9 RNU6-622P-201ENST00000384272 103 ntBASIC1.84□□□□□ -2.11
NUDCD3Q8IVD9 MIR561-201ENST00000385216 97 ntBASIC1.84□□□□□ -2.11
NUDCD3Q8IVD9 CASP3-203ENST00000393588 677 ntTSL 4 BASIC1.84□□□□□ -2.11
NUDCD3Q8IVD9 HMGN2P39-201ENST00000398005 273 ntBASIC1.84□□□□□ -2.11
NUDCD3Q8IVD9 GSTA9P-201ENST00000406231 611 ntBASIC1.84□□□□□ -2.11
NUDCD3Q8IVD9 Z98742.3-201ENST00000418637 326 ntBASIC1.84□□□□□ -2.11
NUDCD3Q8IVD9 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC1.84□□□□□ -2.11
NUDCD3Q8IVD9 CYCSP46-201ENST00000423569 204 ntBASIC1.84□□□□□ -2.11
NUDCD3Q8IVD9 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC1.84□□□□□ -2.11
NUDCD3Q8IVD9 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC1.84□□□□□ -2.11
NUDCD3Q8IVD9 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC1.84□□□□□ -2.11
NUDCD3Q8IVD9 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC1.84□□□□□ -2.11
NUDCD3Q8IVD9 AC073614.1-201ENST00000438690 650 ntBASIC1.84□□□□□ -2.11
NUDCD3Q8IVD9 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC1.84□□□□□ -2.11
NUDCD3Q8IVD9 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC1.84□□□□□ -2.11
NUDCD3Q8IVD9 MTCYBP1-201ENST00000454315 1119 ntBASIC1.84□□□□□ -2.11
NUDCD3Q8IVD9 SNRPFP4-201ENST00000456366 242 ntBASIC1.84□□□□□ -2.11
NUDCD3Q8IVD9 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC1.84□□□□□ -2.11
NUDCD3Q8IVD9 AC090572.1-201ENST00000519251 160 ntBASIC1.84□□□□□ -2.11
NUDCD3Q8IVD9 AC107953.1-201ENST00000522216 297 ntBASIC1.84□□□□□ -2.11
NUDCD3Q8IVD9 RANP3-201ENST00000530970 276 ntBASIC1.84□□□□□ -2.11
NUDCD3Q8IVD9 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.84□□□□□ -2.11
NUDCD3Q8IVD9 MIR3122-201ENST00000577243 73 ntBASIC1.84□□□□□ -2.11
NUDCD3Q8IVD9 AC024614.2-201ENST00000577584 372 ntBASIC1.84□□□□□ -2.11
NUDCD3Q8IVD9 AC098614.4-201ENST00000607601 462 ntBASIC1.84□□□□□ -2.11
NUDCD3Q8IVD9 uc_338.15-201ENST00000615470 191 ntBASIC1.84□□□□□ -2.11
NUDCD3Q8IVD9 AC093648.1-201ENST00000623546 606 ntBASIC1.84□□□□□ -2.11
NUDCD3Q8IVD9 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
NUDCD3Q8IVD9 OR4G2P-201ENST00000328113 903 ntBASIC1.83□□□□□ -2.12
NUDCD3Q8IVD9 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
NUDCD3Q8IVD9 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
NUDCD3Q8IVD9 RNU6-529P-201ENST00000363383 104 ntBASIC1.83□□□□□ -2.12
NUDCD3Q8IVD9 Y_RNA.576-201ENST00000384781 102 ntBASIC1.83□□□□□ -2.12
NUDCD3Q8IVD9 RNU2-2P-201ENST00000410396 191 ntBASIC1.83□□□□□ -2.12
NUDCD3Q8IVD9 MTCYBP5-201ENST00000423752 1135 ntBASIC1.83□□□□□ -2.12
NUDCD3Q8IVD9 ISCA1P6-201ENST00000427740 390 ntBASIC1.83□□□□□ -2.12
NUDCD3Q8IVD9 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC1.83□□□□□ -2.12
NUDCD3Q8IVD9 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC1.83□□□□□ -2.12
NUDCD3Q8IVD9 ANXA2P1-201ENST00000505539 926 ntBASIC1.83□□□□□ -2.12
NUDCD3Q8IVD9 SNORA43.2-201ENST00000516652 128 ntBASIC1.83□□□□□ -2.12
NUDCD3Q8IVD9 RNU6-586P-201ENST00000517265 104 ntBASIC1.83□□□□□ -2.12
NUDCD3Q8IVD9 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC1.83□□□□□ -2.12
NUDCD3Q8IVD9 BNIP3P6-201ENST00000549284 499 ntBASIC1.83□□□□□ -2.12
NUDCD3Q8IVD9 MIR4419B-201ENST00000577260 68 ntBASIC1.83□□□□□ -2.12
NUDCD3Q8IVD9 MIR1273D-201ENST00000577266 86 ntBASIC1.83□□□□□ -2.12
NUDCD3Q8IVD9 U2.15-201ENST00000611544 191 ntBASIC1.83□□□□□ -2.12
NUDCD3Q8IVD9 U2.16-201ENST00000613119 191 ntBASIC1.83□□□□□ -2.12
NUDCD3Q8IVD9 U2.12-201ENST00000613778 191 ntBASIC1.83□□□□□ -2.12
NUDCD3Q8IVD9 U2.20-201ENST00000613956 192 ntBASIC1.83□□□□□ -2.12
NUDCD3Q8IVD9 U2.9-201ENST00000615427 191 ntBASIC1.83□□□□□ -2.12
NUDCD3Q8IVD9 U2.11-201ENST00000616345 191 ntBASIC1.83□□□□□ -2.12
NUDCD3Q8IVD9 U2.2-201ENST00000616535 191 ntBASIC1.83□□□□□ -2.12
NUDCD3Q8IVD9 AC108479.2-201ENST00000617314 601 ntBASIC1.83□□□□□ -2.12
NUDCD3Q8IVD9 U2.3-201ENST00000617785 191 ntBASIC1.83□□□□□ -2.12
NUDCD3Q8IVD9 U2.19-201ENST00000618602 191 ntBASIC1.83□□□□□ -2.12
NUDCD3Q8IVD9 RNU2-1-201ENST00000618664 191 ntBASIC1.83□□□□□ -2.12
NUDCD3Q8IVD9 U2.6-201ENST00000619225 191 ntBASIC1.83□□□□□ -2.12
NUDCD3Q8IVD9 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC1.83□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 116.8 ms