Protein–RNA interactions for Protein: Q7Z6J0

SH3RF1, E3 ubiquitin-protein ligase SH3RF1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1Q7Z6J0 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
SH3RF1Q7Z6J0 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC5.02□□□□□ -1.61
SH3RF1Q7Z6J0 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
SH3RF1Q7Z6J0 MIR383-201ENST00000362257 73 ntBASIC5.02□□□□□ -1.61
SH3RF1Q7Z6J0 RNU6-1056P-201ENST00000383996 107 ntBASIC5.02□□□□□ -1.61
SH3RF1Q7Z6J0 MIR554-201ENST00000384874 96 ntBASIC5.02□□□□□ -1.61
SH3RF1Q7Z6J0 AL512844.2-201ENST00000433990 593 ntBASIC5.02□□□□□ -1.61
SH3RF1Q7Z6J0 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC5.02□□□□□ -1.61
SH3RF1Q7Z6J0 AL451050.1-201ENST00000450126 415 ntBASIC5.02□□□□□ -1.61
SH3RF1Q7Z6J0 SNRPGP7-201ENST00000469016 106 ntBASIC5.02□□□□□ -1.61
SH3RF1Q7Z6J0 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC5.02□□□□□ -1.61
SH3RF1Q7Z6J0 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC5.02□□□□□ -1.61
SH3RF1Q7Z6J0 RNU6-1234P-201ENST00000516877 103 ntBASIC5.02□□□□□ -1.61
SH3RF1Q7Z6J0 CYCSP23-201ENST00000519781 313 ntBASIC5.02□□□□□ -1.61
SH3RF1Q7Z6J0 IGLV3-26-201ENST00000520756 302 ntBASIC5.02□□□□□ -1.61
SH3RF1Q7Z6J0 TRAV28-201ENST00000557548 323 ntBASIC5.02□□□□□ -1.61
SH3RF1Q7Z6J0 MIR3613-201ENST00000579844 87 ntBASIC5.02□□□□□ -1.61
SH3RF1Q7Z6J0 BMS1P21-201ENST00000634565 365 ntBASIC5.02□□□□□ -1.61
SH3RF1Q7Z6J0 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SH3RF1Q7Z6J0 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
SH3RF1Q7Z6J0 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SH3RF1Q7Z6J0 AC110491.1-201ENST00000562191 2010 ntBASIC5.02□□□□□ -1.61
SH3RF1Q7Z6J0 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
SH3RF1Q7Z6J0 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SH3RF1Q7Z6J0 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC5.02□□□□□ -1.61
SH3RF1Q7Z6J0 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
SH3RF1Q7Z6J0 AL592182.3-201ENST00000642132 3304 ntBASIC5.02□□□□□ -1.61
SH3RF1Q7Z6J0 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC5.01□□□□□ -1.61
SH3RF1Q7Z6J0 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
SH3RF1Q7Z6J0 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
SH3RF1Q7Z6J0 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
SH3RF1Q7Z6J0 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
SH3RF1Q7Z6J0 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC5.01□□□□□ -1.61
SH3RF1Q7Z6J0 Z82210.1-201ENST00000440037 231 ntBASIC5.01□□□□□ -1.61
SH3RF1Q7Z6J0 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC5.01□□□□□ -1.61
SH3RF1Q7Z6J0 AC010095.1-201ENST00000443543 144 ntBASIC5.01□□□□□ -1.61
SH3RF1Q7Z6J0 RPS20P10-201ENST00000451209 253 ntBASIC5.01□□□□□ -1.61
SH3RF1Q7Z6J0 AC012671.1-201ENST00000451912 203 ntBASIC5.01□□□□□ -1.61
SH3RF1Q7Z6J0 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC5.01□□□□□ -1.61
SH3RF1Q7Z6J0 SUMO2P18-201ENST00000518873 252 ntBASIC5.01□□□□□ -1.61
SH3RF1Q7Z6J0 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC5.01□□□□□ -1.61
SH3RF1Q7Z6J0 AC090132.2-201ENST00000615881 347 ntBASIC5.01□□□□□ -1.61
SH3RF1Q7Z6J0 AC008873.1-201ENST00000625051 138 ntBASIC5.01□□□□□ -1.61
SH3RF1Q7Z6J0 PSMD5-AS1-215ENST00000640622 205 ntBASIC5.01□□□□□ -1.61
SH3RF1Q7Z6J0 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC5.01□□□□□ -1.61
SH3RF1Q7Z6J0 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC5.01□□□□□ -1.61
SH3RF1Q7Z6J0 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
SH3RF1Q7Z6J0 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.01□□□□□ -1.61
SH3RF1Q7Z6J0 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
SH3RF1Q7Z6J0 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC5□□□□□ -1.61
SH3RF1Q7Z6J0 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
SH3RF1Q7Z6J0 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC5□□□□□ -1.61
SH3RF1Q7Z6J0 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC5□□□□□ -1.61
SH3RF1Q7Z6J0 SNORA71.3-201ENST00000362582 128 ntBASIC5□□□□□ -1.61
SH3RF1Q7Z6J0 RNU6-1272P-201ENST00000362776 107 ntBASIC5□□□□□ -1.61
SH3RF1Q7Z6J0 SNORD115-8-201ENST00000363856 82 ntBASIC5□□□□□ -1.61
SH3RF1Q7Z6J0 SNORD115-38-201ENST00000365037 82 ntBASIC5□□□□□ -1.61
SH3RF1Q7Z6J0 RNU1-140P-201ENST00000365040 165 ntBASIC5□□□□□ -1.61
SH3RF1Q7Z6J0 RNU6-629P-201ENST00000384061 103 ntBASIC5□□□□□ -1.61
SH3RF1Q7Z6J0 RNU6-239P-201ENST00000390990 99 ntBASIC5□□□□□ -1.61
SH3RF1Q7Z6J0 AL357075.1-201ENST00000404107 726 ntBASIC5□□□□□ -1.61
SH3RF1Q7Z6J0 RPL23AP95-201ENST00000426806 265 ntBASIC5□□□□□ -1.61
SH3RF1Q7Z6J0 AL117339.2-201ENST00000430475 180 ntBASIC5□□□□□ -1.61
SH3RF1Q7Z6J0 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC5□□□□□ -1.61
SH3RF1Q7Z6J0 RNU6-625P-201ENST00000459412 107 ntBASIC5□□□□□ -1.61
SH3RF1Q7Z6J0 AC010285.1-201ENST00000470580 392 ntBASIC5□□□□□ -1.61
SH3RF1Q7Z6J0 AC016632.1-201ENST00000503994 196 ntBASIC5□□□□□ -1.61
SH3RF1Q7Z6J0 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC5□□□□□ -1.61
SH3RF1Q7Z6J0 RNA5SP54-201ENST00000516951 92 ntBASIC5□□□□□ -1.61
SH3RF1Q7Z6J0 MIR3145-201ENST00000580727 82 ntBASIC5□□□□□ -1.61
SH3RF1Q7Z6J0 AL160290.3-201ENST00000604869 165 ntBASIC5□□□□□ -1.61
SH3RF1Q7Z6J0 AC007546.2-201ENST00000623996 360 ntBASIC5□□□□□ -1.61
SH3RF1Q7Z6J0 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC5□□□□□ -1.61
SH3RF1Q7Z6J0 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC5□□□□□ -1.61
SH3RF1Q7Z6J0 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC5□□□□□ -1.61
SH3RF1Q7Z6J0 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC5□□□□□ -1.61
SH3RF1Q7Z6J0 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC5□□□□□ -1.61
SH3RF1Q7Z6J0 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
SH3RF1Q7Z6J0 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC5□□□□□ -1.61
SH3RF1Q7Z6J0 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.99□□□□□ -1.61
SH3RF1Q7Z6J0 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
SH3RF1Q7Z6J0 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
SH3RF1Q7Z6J0 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
SH3RF1Q7Z6J0 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
SH3RF1Q7Z6J0 SNORD32A-201ENST00000364805 84 ntBASIC4.99□□□□□ -1.61
SH3RF1Q7Z6J0 MIR539-201ENST00000365690 78 ntBASIC4.99□□□□□ -1.61
SH3RF1Q7Z6J0 Y_RNA.563-201ENST00000384707 108 ntBASIC4.99□□□□□ -1.61
SH3RF1Q7Z6J0 MIR513C-201ENST00000401352 84 ntBASIC4.99□□□□□ -1.61
SH3RF1Q7Z6J0 CYCSP19-201ENST00000411715 316 ntBASIC4.99□□□□□ -1.61
SH3RF1Q7Z6J0 AC138623.1-201ENST00000418060 216 ntBASIC4.99□□□□□ -1.61
SH3RF1Q7Z6J0 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC4.99□□□□□ -1.61
SH3RF1Q7Z6J0 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
SH3RF1Q7Z6J0 Y_RNA.797-201ENST00000515977 94 ntBASIC4.99□□□□□ -1.61
SH3RF1Q7Z6J0 HSPE1P4-201ENST00000550617 308 ntBASIC4.99□□□□□ -1.61
SH3RF1Q7Z6J0 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC4.99□□□□□ -1.61
SH3RF1Q7Z6J0 CYCSP39-201ENST00000565821 309 ntBASIC4.99□□□□□ -1.61
SH3RF1Q7Z6J0 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.99□□□□□ -1.61
SH3RF1Q7Z6J0 RNA5SP108-201ENST00000605921 117 ntBASIC4.99□□□□□ -1.61
SH3RF1Q7Z6J0 MIR6867-201ENST00000610636 67 ntBASIC4.99□□□□□ -1.61
SH3RF1Q7Z6J0 SNORA43.4-201ENST00000629559 138 ntBASIC4.99□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 113.5 ms