Protein–RNA interactions for Protein: Q7Z494

NPHP3, Nephrocystin-3, humanhuman

Predictions only

Length 1,330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3Q7Z494 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
NPHP3Q7Z494 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.68□□□□□ -1.98
NPHP3Q7Z494 RNU6-623P-201ENST00000363143 105 ntBASIC2.68□□□□□ -1.98
NPHP3Q7Z494 Y_RNA.159-201ENST00000363674 87 ntBASIC2.68□□□□□ -1.98
NPHP3Q7Z494 Y_RNA.296-201ENST00000364930 108 ntBASIC2.68□□□□□ -1.98
NPHP3Q7Z494 RNU6-61P-201ENST00000365528 109 ntBASIC2.68□□□□□ -1.98
NPHP3Q7Z494 RNU6-108P-201ENST00000365558 107 ntBASIC2.68□□□□□ -1.98
NPHP3Q7Z494 RNU1-109P-201ENST00000383960 147 ntBASIC2.68□□□□□ -1.98
NPHP3Q7Z494 RNU6-259P-201ENST00000383999 107 ntBASIC2.68□□□□□ -1.98
NPHP3Q7Z494 RNU5A-6P-201ENST00000384136 116 ntBASIC2.68□□□□□ -1.98
NPHP3Q7Z494 RNU6-190P-201ENST00000384154 102 ntBASIC2.68□□□□□ -1.98
NPHP3Q7Z494 RNU6-1042P-201ENST00000384204 107 ntBASIC2.68□□□□□ -1.98
NPHP3Q7Z494 SNORD116-4-201ENST00000384733 96 ntBASIC2.68□□□□□ -1.98
NPHP3Q7Z494 FGFR1OP2P1-201ENST00000395943 500 ntBASIC2.68□□□□□ -1.98
NPHP3Q7Z494 RNU2-9P-201ENST00000410194 145 ntBASIC2.68□□□□□ -1.98
NPHP3Q7Z494 RPL26P27-201ENST00000414397 437 ntBASIC2.68□□□□□ -1.98
NPHP3Q7Z494 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC2.68□□□□□ -1.98
NPHP3Q7Z494 TPTE2P5-203ENST00000458118 728 ntBASIC2.68□□□□□ -1.98
NPHP3Q7Z494 AC107626.1-201ENST00000471084 183 ntBASIC2.68□□□□□ -1.98
NPHP3Q7Z494 AP000852.1-201ENST00000472460 573 ntBASIC2.68□□□□□ -1.98
NPHP3Q7Z494 AC023194.1-201ENST00000493084 308 ntBASIC2.68□□□□□ -1.98
NPHP3Q7Z494 AC005840.1-201ENST00000498412 377 ntBASIC2.68□□□□□ -1.98
NPHP3Q7Z494 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC2.68□□□□□ -1.98
NPHP3Q7Z494 AC091133.4-201ENST00000511142 308 ntBASIC2.68□□□□□ -1.98
NPHP3Q7Z494 RNU6-914P-201ENST00000516749 109 ntBASIC2.68□□□□□ -1.98
NPHP3Q7Z494 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC2.68□□□□□ -1.98
NPHP3Q7Z494 AP003072.2-201ENST00000527756 676 ntBASIC2.68□□□□□ -1.98
NPHP3Q7Z494 FAM92A1P1-201ENST00000528023 890 ntBASIC2.68□□□□□ -1.98
NPHP3Q7Z494 AC022880.1-201ENST00000534017 973 ntBASIC2.68□□□□□ -1.98
NPHP3Q7Z494 NACAP3-201ENST00000552100 481 ntBASIC2.68□□□□□ -1.98
NPHP3Q7Z494 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC2.68□□□□□ -1.98
NPHP3Q7Z494 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.68□□□□□ -1.98
NPHP3Q7Z494 AC078795.2-201ENST00000602835 1252 ntBASIC2.68□□□□□ -1.98
NPHP3Q7Z494 AC025449.1-201ENST00000603896 529 ntBASIC2.68□□□□□ -1.98
NPHP3Q7Z494 MIR15A-201ENST00000607334 83 ntBASIC2.68□□□□□ -1.98
NPHP3Q7Z494 DUSP12P1-201ENST00000612874 516 ntBASIC2.68□□□□□ -1.98
NPHP3Q7Z494 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.68□□□□□ -1.98
NPHP3Q7Z494 MIR3199-2-201ENST00000636243 86 ntBASIC2.68□□□□□ -1.98
NPHP3Q7Z494 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
NPHP3Q7Z494 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.67□□□□□ -1.98
NPHP3Q7Z494 RNU6-1097P-201ENST00000363586 107 ntBASIC2.67□□□□□ -1.98
NPHP3Q7Z494 Y_RNA.534-201ENST00000384599 112 ntBASIC2.67□□□□□ -1.98
NPHP3Q7Z494 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
NPHP3Q7Z494 AC068050.1-201ENST00000394891 380 ntBASIC2.67□□□□□ -1.98
NPHP3Q7Z494 AP1B1P2-201ENST00000416196 106 ntBASIC2.67□□□□□ -1.98
NPHP3Q7Z494 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC2.67□□□□□ -1.98
NPHP3Q7Z494 AL109913.1-201ENST00000421173 514 ntBASIC2.67□□□□□ -1.98
NPHP3Q7Z494 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC2.67□□□□□ -1.98
NPHP3Q7Z494 AC003989.2-201ENST00000440224 169 ntBASIC2.67□□□□□ -1.98
NPHP3Q7Z494 AC079781.2-201ENST00000446424 169 ntBASIC2.67□□□□□ -1.98
NPHP3Q7Z494 AL163540.1-201ENST00000485382 386 ntBASIC2.67□□□□□ -1.98
NPHP3Q7Z494 RPL36AP21-201ENST00000490372 323 ntBASIC2.67□□□□□ -1.98
NPHP3Q7Z494 EIF4EP3-201ENST00000498782 656 ntBASIC2.67□□□□□ -1.98
NPHP3Q7Z494 AC091435.1-201ENST00000505442 584 ntBASIC2.67□□□□□ -1.98
NPHP3Q7Z494 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.67□□□□□ -1.98
NPHP3Q7Z494 AC108078.1-201ENST00000508073 725 ntBASIC2.67□□□□□ -1.98
NPHP3Q7Z494 RPPH1-2P-201ENST00000516688 293 ntBASIC2.67□□□□□ -1.98
NPHP3Q7Z494 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC2.67□□□□□ -1.98
NPHP3Q7Z494 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC2.67□□□□□ -1.98
NPHP3Q7Z494 OR5AL2P-201ENST00000532185 920 ntBASIC2.67□□□□□ -1.98
NPHP3Q7Z494 AC135279.1-201ENST00000543493 504 ntBASIC2.67□□□□□ -1.98
NPHP3Q7Z494 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC2.67□□□□□ -1.98
NPHP3Q7Z494 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.67□□□□□ -1.98
NPHP3Q7Z494 MIR5002-201ENST00000584713 97 ntBASIC2.67□□□□□ -1.98
NPHP3Q7Z494 AL391646.1-201ENST00000603860 190 ntBASIC2.67□□□□□ -1.98
NPHP3Q7Z494 AL049779.4-201ENST00000604500 156 ntBASIC2.67□□□□□ -1.98
NPHP3Q7Z494 AC011890.2-201ENST00000613393 294 ntBASIC2.67□□□□□ -1.98
NPHP3Q7Z494 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.67□□□□□ -1.98
NPHP3Q7Z494 AC139792.2-201ENST00000624218 587 ntBASIC2.67□□□□□ -1.98
NPHP3Q7Z494 AC009161.2-201ENST00000624626 138 ntBASIC2.67□□□□□ -1.98
NPHP3Q7Z494 AC010889.1-201ENST00000566193 2666 ntBASIC2.66□□□□□ -1.98
NPHP3Q7Z494 ZNF720P1-201ENST00000562403 1939 ntBASIC2.66□□□□□ -1.98
NPHP3Q7Z494 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.66□□□□□ -1.98
NPHP3Q7Z494 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC2.66□□□□□ -1.98
NPHP3Q7Z494 SNORA62.1-201ENST00000364287 154 ntBASIC2.66□□□□□ -1.98
NPHP3Q7Z494 AC096649.2-201ENST00000416186 393 ntBASIC2.66□□□□□ -1.98
NPHP3Q7Z494 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
NPHP3Q7Z494 AC027124.2-201ENST00000428249 105 ntBASIC2.66□□□□□ -1.98
NPHP3Q7Z494 AL445687.1-201ENST00000439946 251 ntBASIC2.66□□□□□ -1.98
NPHP3Q7Z494 AC098831.1-201ENST00000440661 216 ntBASIC2.66□□□□□ -1.98
NPHP3Q7Z494 AC011753.1-201ENST00000451001 220 ntBASIC2.66□□□□□ -1.98
NPHP3Q7Z494 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC2.66□□□□□ -1.98
NPHP3Q7Z494 RPL37P25-201ENST00000507308 276 ntBASIC2.66□□□□□ -1.98
NPHP3Q7Z494 Y_RNA.655-201ENST00000515919 96 ntBASIC2.66□□□□□ -1.98
NPHP3Q7Z494 SNORA25.15-201ENST00000516487 89 ntBASIC2.66□□□□□ -1.98
NPHP3Q7Z494 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC2.66□□□□□ -1.98
NPHP3Q7Z494 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC2.66□□□□□ -1.98
NPHP3Q7Z494 AC008521.1-201ENST00000587471 187 ntBASIC2.66□□□□□ -1.98
NPHP3Q7Z494 AC004223.2-201ENST00000590309 544 ntBASIC2.66□□□□□ -1.98
NPHP3Q7Z494 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.66□□□□□ -1.98
NPHP3Q7Z494 AC174048.1-201ENST00000603389 144 ntBASIC2.66□□□□□ -1.98
NPHP3Q7Z494 AL355598.1-201ENST00000604169 202 ntBASIC2.66□□□□□ -1.98
NPHP3Q7Z494 AC007684.1-201ENST00000609671 477 ntBASIC2.66□□□□□ -1.98
NPHP3Q7Z494 HULC.1-201ENST00000612720 240 ntBASIC2.66□□□□□ -1.98
NPHP3Q7Z494 AC012409.4-201ENST00000612923 249 ntBASIC2.66□□□□□ -1.98
NPHP3Q7Z494 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC2.66□□□□□ -1.98
NPHP3Q7Z494 AL157786.1-207ENST00000627771 695 ntBASIC2.66□□□□□ -1.98
NPHP3Q7Z494 AC068137.4-201ENST00000638485 296 ntBASIC2.66□□□□□ -1.98
NPHP3Q7Z494 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.65□□□□□ -1.98
NPHP3Q7Z494 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC2.65□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 112.7 ms