Protein–RNA interactions for Protein: Q7Z398

ZNF550, Zinc finger protein 550, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF550Q7Z398 AC009518.2-201ENST00000418056 731 ntBASIC1.12□□□□□ -2.23
ZNF550Q7Z398 NCOR1P3-201ENST00000420479 303 ntBASIC1.12□□□□□ -2.23
ZNF550Q7Z398 USP9YP18-201ENST00000425912 695 ntBASIC1.12□□□□□ -2.23
ZNF550Q7Z398 SDAD1P3-201ENST00000427380 333 ntBASIC1.12□□□□□ -2.23
ZNF550Q7Z398 USP9YP11-201ENST00000427537 717 ntBASIC1.12□□□□□ -2.23
ZNF550Q7Z398 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC1.12□□□□□ -2.23
ZNF550Q7Z398 AC108059.3-201ENST00000456388 214 ntBASIC1.12□□□□□ -2.23
ZNF550Q7Z398 RPS29P29-201ENST00000456396 171 ntBASIC1.12□□□□□ -2.23
ZNF550Q7Z398 snoU13.9-201ENST00000458927 103 ntBASIC1.12□□□□□ -2.23
ZNF550Q7Z398 AL121594.1-201ENST00000475906 575 ntBASIC1.12□□□□□ -2.23
ZNF550Q7Z398 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC1.12□□□□□ -2.23
ZNF550Q7Z398 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.12□□□□□ -2.23
ZNF550Q7Z398 RN7SKP256-201ENST00000517201 314 ntBASIC1.12□□□□□ -2.23
ZNF550Q7Z398 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.12□□□□□ -2.23
ZNF550Q7Z398 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC1.12□□□□□ -2.23
ZNF550Q7Z398 AL160236.1-201ENST00000556317 195 ntBASIC1.12□□□□□ -2.23
ZNF550Q7Z398 AC008269.2-201ENST00000561915 1105 ntBASIC1.12□□□□□ -2.23
ZNF550Q7Z398 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.12□□□□□ -2.23
ZNF550Q7Z398 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC1.12□□□□□ -2.23
ZNF550Q7Z398 AC007363.1-201ENST00000604736 620 ntBASIC1.12□□□□□ -2.23
ZNF550Q7Z398 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC1.12□□□□□ -2.23
ZNF550Q7Z398 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.12□□□□□ -2.23
ZNF550Q7Z398 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.12□□□□□ -2.23
ZNF550Q7Z398 AC092125.1-201ENST00000562568 1995 ntBASIC1.11□□□□□ -2.23
ZNF550Q7Z398 RNU6-560P-201ENST00000364007 108 ntBASIC1.11□□□□□ -2.23
ZNF550Q7Z398 RNU5A-8P-201ENST00000364102 114 ntBASIC1.11□□□□□ -2.23
ZNF550Q7Z398 Y_RNA.224-201ENST00000364308 111 ntBASIC1.11□□□□□ -2.23
ZNF550Q7Z398 RNU6-487P-201ENST00000365430 104 ntBASIC1.11□□□□□ -2.23
ZNF550Q7Z398 RNU1-78P-201ENST00000391248 165 ntBASIC1.11□□□□□ -2.23
ZNF550Q7Z398 MIR1276-201ENST00000408707 83 ntBASIC1.11□□□□□ -2.23
ZNF550Q7Z398 RN7SKP266-201ENST00000410232 287 ntBASIC1.11□□□□□ -2.23
ZNF550Q7Z398 RNU6-1025P-201ENST00000410629 104 ntBASIC1.11□□□□□ -2.23
ZNF550Q7Z398 RPL30P13-201ENST00000418873 348 ntBASIC1.11□□□□□ -2.23
ZNF550Q7Z398 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC1.11□□□□□ -2.23
ZNF550Q7Z398 AL591704.1-201ENST00000432574 275 ntBASIC1.11□□□□□ -2.23
ZNF550Q7Z398 AC005908.1-201ENST00000468701 347 ntBASIC1.11□□□□□ -2.23
ZNF550Q7Z398 RNA5SP216-201ENST00000516111 123 ntBASIC1.11□□□□□ -2.23
ZNF550Q7Z398 RNA5SP102-201ENST00000516865 106 ntBASIC1.11□□□□□ -2.23
ZNF550Q7Z398 RNU6-1315P-201ENST00000517187 99 ntBASIC1.11□□□□□ -2.23
ZNF550Q7Z398 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC1.11□□□□□ -2.23
ZNF550Q7Z398 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC1.11□□□□□ -2.23
ZNF550Q7Z398 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
ZNF550Q7Z398 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC1.11□□□□□ -2.23
ZNF550Q7Z398 MTND3P13-201ENST00000574391 343 ntBASIC1.11□□□□□ -2.23
ZNF550Q7Z398 AC080078.3-201ENST00000605407 463 ntBASIC1.11□□□□□ -2.23
ZNF550Q7Z398 AC112220.2-201ENST00000605513 533 ntBASIC1.11□□□□□ -2.23
ZNF550Q7Z398 AC097468.3-201ENST00000607956 456 ntBASIC1.11□□□□□ -2.23
ZNF550Q7Z398 AC245297.2-201ENST00000610119 565 ntBASIC1.11□□□□□ -2.23
ZNF550Q7Z398 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC1.11□□□□□ -2.23
ZNF550Q7Z398 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.11□□□□□ -2.23
ZNF550Q7Z398 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.1□□□□□ -2.23
ZNF550Q7Z398 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
ZNF550Q7Z398 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
ZNF550Q7Z398 Y_RNA.99-201ENST00000363138 105 ntBASIC1.1□□□□□ -2.23
ZNF550Q7Z398 RNU6-1210P-201ENST00000363775 107 ntBASIC1.1□□□□□ -2.23
ZNF550Q7Z398 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC1.1□□□□□ -2.23
ZNF550Q7Z398 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC1.1□□□□□ -2.23
ZNF550Q7Z398 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC1.1□□□□□ -2.23
ZNF550Q7Z398 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC1.1□□□□□ -2.23
ZNF550Q7Z398 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC1.1□□□□□ -2.23
ZNF550Q7Z398 AC132942.1-201ENST00000486753 483 ntBASIC1.1□□□□□ -2.23
ZNF550Q7Z398 AC025465.3-201ENST00000510570 311 ntBASIC1.1□□□□□ -2.23
ZNF550Q7Z398 RNU6-965P-201ENST00000516721 96 ntBASIC1.1□□□□□ -2.23
ZNF550Q7Z398 AC090821.2-201ENST00000523552 176 ntBASIC1.1□□□□□ -2.23
ZNF550Q7Z398 AP000907.2-201ENST00000530827 353 ntBASIC1.1□□□□□ -2.23
ZNF550Q7Z398 AC018630.3-201ENST00000542637 96 ntBASIC1.1□□□□□ -2.23
ZNF550Q7Z398 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.1□□□□□ -2.23
ZNF550Q7Z398 BNIP3P27-201ENST00000599991 412 ntBASIC1.1□□□□□ -2.23
ZNF550Q7Z398 AC123912.5-201ENST00000605470 343 ntBASIC1.1□□□□□ -2.23
ZNF550Q7Z398 AC024060.1-201ENST00000607052 494 ntBASIC1.1□□□□□ -2.23
ZNF550Q7Z398 AL050343.2-201ENST00000607338 280 ntBASIC1.1□□□□□ -2.23
ZNF550Q7Z398 ATP8A2P2-201ENST00000437678 1568 ntBASIC1.09□□□□□ -2.23
ZNF550Q7Z398 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.09□□□□□ -2.23
ZNF550Q7Z398 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.23
ZNF550Q7Z398 SNORA63.3-201ENST00000362682 132 ntBASIC1.09□□□□□ -2.23
ZNF550Q7Z398 RNU4-91P-201ENST00000364778 135 ntBASIC1.09□□□□□ -2.23
ZNF550Q7Z398 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.23
ZNF550Q7Z398 RNU6-439P-201ENST00000384188 106 ntBASIC1.09□□□□□ -2.23
ZNF550Q7Z398 Y_RNA.534-201ENST00000384599 112 ntBASIC1.09□□□□□ -2.23
ZNF550Q7Z398 MIR29B2-201ENST00000385055 81 ntBASIC1.09□□□□□ -2.23
ZNF550Q7Z398 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC1.09□□□□□ -2.23
ZNF550Q7Z398 CBX3P9-201ENST00000402326 552 ntBASIC1.09□□□□□ -2.23
ZNF550Q7Z398 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC1.09□□□□□ -2.23
ZNF550Q7Z398 AC016831.2-201ENST00000417179 352 ntBASIC1.09□□□□□ -2.23
ZNF550Q7Z398 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.09□□□□□ -2.23
ZNF550Q7Z398 MTCO3P5-201ENST00000433620 714 ntBASIC1.09□□□□□ -2.23
ZNF550Q7Z398 MTND1P3-201ENST00000484956 952 ntBASIC1.09□□□□□ -2.23
ZNF550Q7Z398 AC093852.1-201ENST00000503587 266 ntBASIC1.09□□□□□ -2.23
ZNF550Q7Z398 RNVU1-2-201ENST00000516326 135 ntBASIC1.09□□□□□ -2.23
ZNF550Q7Z398 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC1.09□□□□□ -2.23
ZNF550Q7Z398 AP004247.1-201ENST00000531556 1289 ntBASIC1.09□□□□□ -2.23
ZNF550Q7Z398 AL157871.3-201ENST00000557231 293 ntBASIC1.09□□□□□ -2.23
ZNF550Q7Z398 AC002400.1-201ENST00000569310 726 ntBASIC1.09□□□□□ -2.23
ZNF550Q7Z398 AC136618.2-201ENST00000575091 400 ntBASIC1.09□□□□□ -2.23
ZNF550Q7Z398 AP000943.4-201ENST00000622912 357 ntBASIC1.09□□□□□ -2.23
ZNF550Q7Z398 MTND5P42-201ENST00000637720 498 ntBASIC1.09□□□□□ -2.23
ZNF550Q7Z398 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC1.09□□□□□ -2.24
ZNF550Q7Z398 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.09□□□□□ -2.24
ZNF550Q7Z398 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.24
ZNF550Q7Z398 AC027514.1-201ENST00000588561 1603 ntBASIC1.08□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 113.9 ms