Protein–RNA interactions for Protein: Q70EL4

USP43, Ubiquitin carboxyl-terminal hydrolase 43, humanhuman

Predictions only

Length 1,123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP43Q70EL4 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC2.94□□□□□ -1.94
USP43Q70EL4 BX510359.1-201ENST00000456973 237 ntBASIC2.94□□□□□ -1.94
USP43Q70EL4 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC2.94□□□□□ -1.94
USP43Q70EL4 RNU6-1132P-201ENST00000459214 107 ntBASIC2.94□□□□□ -1.94
USP43Q70EL4 RPL21P10-201ENST00000463521 490 ntBASIC2.94□□□□□ -1.94
USP43Q70EL4 HIGD1AP13-201ENST00000509878 289 ntBASIC2.94□□□□□ -1.94
USP43Q70EL4 RNU1-61P-201ENST00000516107 151 ntBASIC2.94□□□□□ -1.94
USP43Q70EL4 RNA5SP468-201ENST00000516782 93 ntBASIC2.94□□□□□ -1.94
USP43Q70EL4 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC2.94□□□□□ -1.94
USP43Q70EL4 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
USP43Q70EL4 AC022080.3-201ENST00000544433 482 ntBASIC2.94□□□□□ -1.94
USP43Q70EL4 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
USP43Q70EL4 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC2.94□□□□□ -1.94
USP43Q70EL4 AC138761.3-201ENST00000579993 334 ntBASIC2.94□□□□□ -1.94
USP43Q70EL4 MIR3128-201ENST00000581957 66 ntBASIC2.94□□□□□ -1.94
USP43Q70EL4 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC2.94□□□□□ -1.94
USP43Q70EL4 AC012119.1-201ENST00000603184 222 ntBASIC2.94□□□□□ -1.94
USP43Q70EL4 SNORD58B-201ENST00000607313 66 ntBASIC2.94□□□□□ -1.94
USP43Q70EL4 AL021879.1-201ENST00000611756 288 ntBASIC2.94□□□□□ -1.94
USP43Q70EL4 uc_338.1-201ENST00000612113 180 ntBASIC2.94□□□□□ -1.94
USP43Q70EL4 DUSP12P1-201ENST00000612874 516 ntBASIC2.94□□□□□ -1.94
USP43Q70EL4 AC103705.1-201ENST00000619013 241 ntBASIC2.94□□□□□ -1.94
USP43Q70EL4 SCARNA15.3-201ENST00000626315 122 ntBASIC2.94□□□□□ -1.94
USP43Q70EL4 SCARNA4.1-201ENST00000628597 123 ntBASIC2.94□□□□□ -1.94
USP43Q70EL4 AC233263.6-201ENST00000631132 1963 ntBASIC2.94□□□□□ -1.94
USP43Q70EL4 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC2.94□□□□□ -1.94
USP43Q70EL4 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
USP43Q70EL4 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
USP43Q70EL4 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC2.93□□□□□ -1.94
USP43Q70EL4 AC005592.1-201ENST00000566527 1640 ntBASIC2.93□□□□□ -1.94
USP43Q70EL4 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC2.93□□□□□ -1.94
USP43Q70EL4 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
USP43Q70EL4 AC108206.1-201ENST00000570186 4159 ntBASIC2.93□□□□□ -1.94
USP43Q70EL4 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.93□□□□□ -1.94
USP43Q70EL4 RNU6-50P-201ENST00000362356 103 ntBASIC2.93□□□□□ -1.94
USP43Q70EL4 Y_RNA.60-201ENST00000362831 98 ntBASIC2.93□□□□□ -1.94
USP43Q70EL4 SNORD3E-201ENST00000362899 217 ntBASIC2.93□□□□□ -1.94
USP43Q70EL4 Y_RNA.117-201ENST00000363294 101 ntBASIC2.93□□□□□ -1.94
USP43Q70EL4 Y_RNA.222-201ENST00000364264 102 ntBASIC2.93□□□□□ -1.94
USP43Q70EL4 RNU1-115P-201ENST00000365329 160 ntBASIC2.93□□□□□ -1.94
USP43Q70EL4 RNU6-432P-201ENST00000384196 109 ntBASIC2.93□□□□□ -1.94
USP43Q70EL4 Y_RNA.473-201ENST00000384333 102 ntBASIC2.93□□□□□ -1.94
USP43Q70EL4 Y_RNA.562-201ENST00000384695 113 ntBASIC2.93□□□□□ -1.94
USP43Q70EL4 RNU6-821P-201ENST00000390995 107 ntBASIC2.93□□□□□ -1.94
USP43Q70EL4 RNU6-550P-201ENST00000391057 101 ntBASIC2.93□□□□□ -1.94
USP43Q70EL4 EIF4E2P1-201ENST00000393781 255 ntBASIC2.93□□□□□ -1.94
USP43Q70EL4 RNU4-65P-201ENST00000410473 140 ntBASIC2.93□□□□□ -1.94
USP43Q70EL4 RNU6-387P-201ENST00000411331 105 ntBASIC2.93□□□□□ -1.94
USP43Q70EL4 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC2.93□□□□□ -1.94
USP43Q70EL4 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC2.93□□□□□ -1.94
USP43Q70EL4 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC2.93□□□□□ -1.94
USP43Q70EL4 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC2.93□□□□□ -1.94
USP43Q70EL4 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC2.93□□□□□ -1.94
USP43Q70EL4 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC2.93□□□□□ -1.94
USP43Q70EL4 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC2.93□□□□□ -1.94
USP43Q70EL4 AC104806.1-201ENST00000508720 308 ntBASIC2.93□□□□□ -1.94
USP43Q70EL4 AC025465.3-201ENST00000510570 311 ntBASIC2.93□□□□□ -1.94
USP43Q70EL4 RNU6-470P-201ENST00000515954 104 ntBASIC2.93□□□□□ -1.94
USP43Q70EL4 RN7SKP43-201ENST00000516173 320 ntBASIC2.93□□□□□ -1.94
USP43Q70EL4 RNU4-77P-201ENST00000516692 156 ntBASIC2.93□□□□□ -1.94
USP43Q70EL4 RNU6-685P-201ENST00000517088 95 ntBASIC2.93□□□□□ -1.94
USP43Q70EL4 RNU6-711P-201ENST00000517255 106 ntBASIC2.93□□□□□ -1.94
USP43Q70EL4 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.93□□□□□ -1.94
USP43Q70EL4 AC007458.1-201ENST00000542812 373 ntBASIC2.93□□□□□ -1.94
USP43Q70EL4 AL137100.2-201ENST00000555786 315 ntBASIC2.93□□□□□ -1.94
USP43Q70EL4 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC2.93□□□□□ -1.94
USP43Q70EL4 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC2.93□□□□□ -1.94
USP43Q70EL4 MIR3910-1-201ENST00000580936 111 ntBASIC2.93□□□□□ -1.94
USP43Q70EL4 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC2.93□□□□□ -1.94
USP43Q70EL4 AL355812.1-201ENST00000603215 216 ntBASIC2.93□□□□□ -1.94
USP43Q70EL4 AC004805.2-201ENST00000605382 482 ntBASIC2.93□□□□□ -1.94
USP43Q70EL4 AC011890.2-201ENST00000613393 294 ntBASIC2.93□□□□□ -1.94
USP43Q70EL4 DLEU2_5.1-201ENST00000615567 84 ntBASIC2.93□□□□□ -1.94
USP43Q70EL4 AC090617.7-201ENST00000623952 126 ntBASIC2.93□□□□□ -1.94
USP43Q70EL4 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC2.93□□□□□ -1.94
USP43Q70EL4 FAM35BP-202ENST00000497389 3337 ntBASIC2.93□□□□□ -1.94
USP43Q70EL4 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC2.92□□□□□ -1.94
USP43Q70EL4 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
USP43Q70EL4 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC2.92□□□□□ -1.94
USP43Q70EL4 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
USP43Q70EL4 RNU6-1287P-201ENST00000362914 107 ntBASIC2.92□□□□□ -1.94
USP43Q70EL4 Y_RNA.350-201ENST00000365409 98 ntBASIC2.92□□□□□ -1.94
USP43Q70EL4 Y_RNA.389-201ENST00000383924 113 ntBASIC2.92□□□□□ -1.94
USP43Q70EL4 Y_RNA.518-201ENST00000384552 113 ntBASIC2.92□□□□□ -1.94
USP43Q70EL4 RNU6-1127P-201ENST00000384580 107 ntBASIC2.92□□□□□ -1.94
USP43Q70EL4 RNU6-1060P-201ENST00000384664 107 ntBASIC2.92□□□□□ -1.94
USP43Q70EL4 Y_RNA.555-201ENST00000384673 110 ntBASIC2.92□□□□□ -1.94
USP43Q70EL4 MIR490-201ENST00000384865 128 ntBASIC2.92□□□□□ -1.94
USP43Q70EL4 AC092447.6-201ENST00000414578 210 ntBASIC2.92□□□□□ -1.94
USP43Q70EL4 AC243428.1-201ENST00000421099 264 ntBASIC2.92□□□□□ -1.94
USP43Q70EL4 AL139396.1-201ENST00000421137 167 ntBASIC2.92□□□□□ -1.94
USP43Q70EL4 PGBD4P6-201ENST00000421501 610 ntBASIC2.92□□□□□ -1.94
USP43Q70EL4 AC093106.2-201ENST00000428212 385 ntBASIC2.92□□□□□ -1.94
USP43Q70EL4 AC005326.1-201ENST00000429197 123 ntBASIC2.92□□□□□ -1.94
USP43Q70EL4 CEP57L1P1-201ENST00000430943 1201 ntBASIC2.92□□□□□ -1.94
USP43Q70EL4 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC2.92□□□□□ -1.94
USP43Q70EL4 DYNLT3P2-201ENST00000442517 295 ntBASIC2.92□□□□□ -1.94
USP43Q70EL4 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC2.92□□□□□ -1.94
USP43Q70EL4 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.92□□□□□ -1.94
USP43Q70EL4 AC008571.1-201ENST00000467232 300 ntBASIC2.92□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms