Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 SNORD12-201ENST00000391002 90 ntBASIC-0.3□□□□□ -2.46
VPS13CQ709C8 MIR942-201ENST00000401111 86 ntBASIC-0.3□□□□□ -2.46
VPS13CQ709C8 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC-0.3□□□□□ -2.46
VPS13CQ709C8 AC121334.2-201ENST00000605387 271 ntBASIC-0.3□□□□□ -2.46
VPS13CQ709C8 BX284668.6-201ENST00000606899 438 ntBASIC-0.3□□□□□ -2.46
VPS13CQ709C8 MIR1295B-201ENST00000636144 60 ntBASIC-0.3□□□□□ -2.46
VPS13CQ709C8 RNU6-320P-201ENST00000516511 106 ntBASIC-0.3□□□□□ -2.46
VPS13CQ709C8 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC-0.3□□□□□ -2.46
VPS13CQ709C8 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC-0.3□□□□□ -2.46
VPS13CQ709C8 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC-0.3□□□□□ -2.46
VPS13CQ709C8 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC-0.3□□□□□ -2.46
VPS13CQ709C8 UGP2-231ENST00000627474 264 ntTSL 5 BASIC-0.3□□□□□ -2.46
VPS13CQ709C8 RNA5SP264-201ENST00000363115 107 ntBASIC-0.31□□□□□ -2.46
VPS13CQ709C8 RNA5SP240-201ENST00000365355 128 ntBASIC-0.31□□□□□ -2.46
VPS13CQ709C8 Y_RNA.493-201ENST00000384422 102 ntBASIC-0.31□□□□□ -2.46
VPS13CQ709C8 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC-0.31□□□□□ -2.46
VPS13CQ709C8 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC-0.31□□□□□ -2.46
VPS13CQ709C8 RNU6-1218P-201ENST00000458990 108 ntBASIC-0.31□□□□□ -2.46
VPS13CQ709C8 AC107626.1-201ENST00000471084 183 ntBASIC-0.31□□□□□ -2.46
VPS13CQ709C8 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC-0.31□□□□□ -2.46
VPS13CQ709C8 RNU6-929P-201ENST00000384429 107 ntBASIC-0.31□□□□□ -2.46
VPS13CQ709C8 RAC1P8-201ENST00000427086 527 ntBASIC-0.31□□□□□ -2.46
VPS13CQ709C8 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC-0.31□□□□□ -2.46
VPS13CQ709C8 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC-0.31□□□□□ -2.46
VPS13CQ709C8 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC-0.31□□□□□ -2.46
VPS13CQ709C8 AC092354.1-201ENST00000606057 376 ntBASIC-0.31□□□□□ -2.46
VPS13CQ709C8 AL133370.2-201ENST00000619934 439 ntBASIC-0.31□□□□□ -2.46
VPS13CQ709C8 AP003399.1-201ENST00000637534 361 ntBASIC-0.31□□□□□ -2.46
VPS13CQ709C8 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC-0.31□□□□□ -2.46
VPS13CQ709C8 RNU6-657P-201ENST00000383904 107 ntBASIC-0.31□□□□□ -2.46
VPS13CQ709C8 RNU6-748P-201ENST00000384648 107 ntBASIC-0.31□□□□□ -2.46
VPS13CQ709C8 RNA5SP219-201ENST00000390940 113 ntBASIC-0.31□□□□□ -2.46
VPS13CQ709C8 AC096531.1-201ENST00000419107 107 ntBASIC-0.31□□□□□ -2.46
VPS13CQ709C8 AC108729.1-201ENST00000487812 947 ntBASIC-0.31□□□□□ -2.46
VPS13CQ709C8 HMGN1P12-201ENST00000499125 195 ntBASIC-0.31□□□□□ -2.46
VPS13CQ709C8 CASP1-212ENST00000531166 300 ntTSL 5 BASIC-0.31□□□□□ -2.46
VPS13CQ709C8 KATNBL1P5-201ENST00000605015 517 ntBASIC-0.31□□□□□ -2.46
VPS13CQ709C8 AC105129.3-201ENST00000605455 485 ntBASIC-0.31□□□□□ -2.46
VPS13CQ709C8 USP12-203ENST00000620323 349 ntTSL 3 BASIC-0.31□□□□□ -2.46
VPS13CQ709C8 AC004009.2-201ENST00000623016 728 ntBASIC-0.31□□□□□ -2.46
VPS13CQ709C8 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC-0.32□□□□□ -2.46
VPS13CQ709C8 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC-0.32□□□□□ -2.46
VPS13CQ709C8 Y_RNA.428-201ENST00000384078 102 ntBASIC-0.32□□□□□ -2.46
VPS13CQ709C8 SNORA12.1-201ENST00000390873 148 ntBASIC-0.32□□□□□ -2.46
VPS13CQ709C8 RPS3AP1-201ENST00000413190 320 ntBASIC-0.32□□□□□ -2.46
VPS13CQ709C8 AC114811.1-201ENST00000507207 168 ntBASIC-0.32□□□□□ -2.46
VPS13CQ709C8 PCNAP1-202ENST00000595299 752 ntBASIC-0.32□□□□□ -2.46
VPS13CQ709C8 RNA5SP109-201ENST00000391010 116 ntBASIC-0.32□□□□□ -2.46
VPS13CQ709C8 RNU6-952P-201ENST00000391164 108 ntBASIC-0.32□□□□□ -2.46
VPS13CQ709C8 AL109913.1-201ENST00000421173 514 ntBASIC-0.32□□□□□ -2.46
VPS13CQ709C8 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC-0.32□□□□□ -2.46
VPS13CQ709C8 Z82190.1-201ENST00000454534 490 ntBASIC-0.32□□□□□ -2.46
VPS13CQ709C8 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC-0.32□□□□□ -2.46
VPS13CQ709C8 AL356432.3-201ENST00000568952 465 ntBASIC-0.32□□□□□ -2.46
VPS13CQ709C8 AC022432.1-201ENST00000595739 310 ntBASIC-0.32□□□□□ -2.46
VPS13CQ709C8 AC138627.2-201ENST00000624202 601 ntBASIC-0.32□□□□□ -2.46
VPS13CQ709C8 RNA5SP125-201ENST00000364843 120 ntBASIC-0.32□□□□□ -2.46
VPS13CQ709C8 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC-0.32□□□□□ -2.46
VPS13CQ709C8 AF213884.2-201ENST00000510417 903 ntBASIC-0.32□□□□□ -2.46
VPS13CQ709C8 MIR3165-201ENST00000579874 75 ntBASIC-0.32□□□□□ -2.46
VPS13CQ709C8 MIR7157-201ENST00000635801 60 ntBASIC-0.32□□□□□ -2.46
VPS13CQ709C8 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC-0.33□□□□□ -2.46
VPS13CQ709C8 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC-0.33□□□□□ -2.46
VPS13CQ709C8 AL049545.1-201ENST00000401856 572 ntBASIC-0.33□□□□□ -2.46
VPS13CQ709C8 AL138880.1-201ENST00000405824 642 ntBASIC-0.33□□□□□ -2.46
VPS13CQ709C8 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC-0.33□□□□□ -2.46
VPS13CQ709C8 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC-0.33□□□□□ -2.46
VPS13CQ709C8 AC097065.2-201ENST00000608159 533 ntBASIC-0.33□□□□□ -2.46
VPS13CQ709C8 AC008443.7-201ENST00000622195 246 ntBASIC-0.33□□□□□ -2.46
VPS13CQ709C8 AL049737.1-201ENST00000413920 1403 ntBASIC-0.33□□□□□ -2.46
VPS13CQ709C8 RNU6-1328P-201ENST00000410938 106 ntBASIC-0.33□□□□□ -2.46
VPS13CQ709C8 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC-0.33□□□□□ -2.46
VPS13CQ709C8 MIR610-201ENST00000385139 96 ntBASIC-0.33□□□□□ -2.46
VPS13CQ709C8 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC-0.33□□□□□ -2.46
VPS13CQ709C8 AC022523.2-201ENST00000561045 150 ntBASIC-0.33□□□□□ -2.46
VPS13CQ709C8 AC004852.3-201ENST00000614131 326 ntBASIC-0.33□□□□□ -2.46
VPS13CQ709C8 AC018755.4-201ENST00000619715 454 ntBASIC-0.33□□□□□ -2.46
VPS13CQ709C8 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC-0.34□□□□□ -2.46
VPS13CQ709C8 VPS26AP1-201ENST00000483197 979 ntBASIC-0.34□□□□□ -2.46
VPS13CQ709C8 AC114981.1-201ENST00000503897 678 ntBASIC-0.34□□□□□ -2.46
VPS13CQ709C8 AC016065.2-201ENST00000514530 444 ntBASIC-0.34□□□□□ -2.46
VPS13CQ709C8 ZNF705CP-201ENST00000530515 889 ntBASIC-0.34□□□□□ -2.46
VPS13CQ709C8 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC-0.34□□□□□ -2.46
VPS13CQ709C8 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC-0.34□□□□□ -2.46
VPS13CQ709C8 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC-0.34□□□□□ -2.46
VPS13CQ709C8 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC-0.34□□□□□ -2.46
VPS13CQ709C8 RNA5SP300-201ENST00000391197 107 ntBASIC-0.34□□□□□ -2.46
VPS13CQ709C8 SNORD75.1-201ENST00000408373 60 ntBASIC-0.34□□□□□ -2.46
VPS13CQ709C8 MIR1267-201ENST00000408723 78 ntBASIC-0.34□□□□□ -2.46
VPS13CQ709C8 RNU6-1037P-201ENST00000459571 107 ntBASIC-0.34□□□□□ -2.46
VPS13CQ709C8 SNORA70.22-201ENST00000517160 124 ntBASIC-0.34□□□□□ -2.46
VPS13CQ709C8 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC-0.34□□□□□ -2.46
VPS13CQ709C8 AL356157.2-201ENST00000605122 111 ntBASIC-0.34□□□□□ -2.46
VPS13CQ709C8 FTX_2.1-201ENST00000618816 94 ntBASIC-0.34□□□□□ -2.46
VPS13CQ709C8 MIR6738-201ENST00000619620 64 ntBASIC-0.34□□□□□ -2.46
VPS13CQ709C8 RNA5SP168-201ENST00000516642 112 ntBASIC-0.34□□□□□ -2.46
VPS13CQ709C8 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC-0.34□□□□□ -2.46
VPS13CQ709C8 AC024257.5-201ENST00000612739 531 ntBASIC-0.34□□□□□ -2.46
VPS13CQ709C8 RNU6-877P-201ENST00000383868 107 ntBASIC-0.35□□□□□ -2.47
VPS13CQ709C8 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC-0.35□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms