Protein–RNA interactions for Protein: Q6UVK1

CSPG4, Chondroitin sulfate proteoglycan 4, humanhuman

Predictions only

Length 2,322 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4Q6UVK1 AC021739.1-201ENST00000559631 174 ntBASIC0.2□□□□□ -2.38
CSPG4Q6UVK1 AC090079.2-201ENST00000575289 768 ntBASIC0.2□□□□□ -2.38
CSPG4Q6UVK1 AL022067.1-201ENST00000602426 454 ntBASIC0.2□□□□□ -2.38
CSPG4Q6UVK1 AC021171.1-201ENST00000603137 706 ntBASIC0.2□□□□□ -2.38
CSPG4Q6UVK1 SNRPGP20-201ENST00000604477 205 ntBASIC0.2□□□□□ -2.38
CSPG4Q6UVK1 AC018618.2-201ENST00000604770 446 ntBASIC0.2□□□□□ -2.38
CSPG4Q6UVK1 AC105129.3-201ENST00000605455 485 ntBASIC0.2□□□□□ -2.38
CSPG4Q6UVK1 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC0.2□□□□□ -2.38
CSPG4Q6UVK1 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC0.2□□□□□ -2.38
CSPG4Q6UVK1 MIR888-201ENST00000401186 77 ntBASIC0.19□□□□□ -2.38
CSPG4Q6UVK1 AC069282.1-201ENST00000411911 526 ntBASIC0.19□□□□□ -2.38
CSPG4Q6UVK1 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC0.19□□□□□ -2.38
CSPG4Q6UVK1 FAM204CP-201ENST00000424489 642 ntBASIC0.19□□□□□ -2.38
CSPG4Q6UVK1 AL135790.2-201ENST00000437701 267 ntBASIC0.19□□□□□ -2.38
CSPG4Q6UVK1 LARP1BP2-201ENST00000486594 519 ntBASIC0.19□□□□□ -2.38
CSPG4Q6UVK1 RPL23AP54-201ENST00000495129 419 ntBASIC0.19□□□□□ -2.38
CSPG4Q6UVK1 RNU6-488P-201ENST00000515918 99 ntBASIC0.19□□□□□ -2.38
CSPG4Q6UVK1 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC0.19□□□□□ -2.38
CSPG4Q6UVK1 BNIP3P27-201ENST00000599991 412 ntBASIC0.19□□□□□ -2.38
CSPG4Q6UVK1 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC0.19□□□□□ -2.38
CSPG4Q6UVK1 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC0.19□□□□□ -2.38
CSPG4Q6UVK1 SNORD14D-201ENST00000384390 87 ntBASIC0.19□□□□□ -2.38
CSPG4Q6UVK1 RNA5SP501-201ENST00000410990 112 ntBASIC0.19□□□□□ -2.38
CSPG4Q6UVK1 FO393419.3-201ENST00000428741 282 ntBASIC0.19□□□□□ -2.38
CSPG4Q6UVK1 AL512637.2-201ENST00000431287 1256 ntBASIC0.19□□□□□ -2.38
CSPG4Q6UVK1 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC0.19□□□□□ -2.38
CSPG4Q6UVK1 ANKRD30BP1-201ENST00000451052 2186 ntBASIC0.19□□□□□ -2.38
CSPG4Q6UVK1 AP1S2P1-201ENST00000457344 379 ntBASIC0.19□□□□□ -2.38
CSPG4Q6UVK1 CYCTP-201ENST00000504253 315 ntBASIC0.19□□□□□ -2.38
CSPG4Q6UVK1 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC0.19□□□□□ -2.38
CSPG4Q6UVK1 AC090772.4-201ENST00000623599 362 ntBASIC0.19□□□□□ -2.38
CSPG4Q6UVK1 AC068700.1-201ENST00000565862 3754 ntBASIC0.19□□□□□ -2.38
CSPG4Q6UVK1 MIR302D-201ENST00000362275 68 ntBASIC0.18□□□□□ -2.38
CSPG4Q6UVK1 RNU6-45P-201ENST00000384471 107 ntBASIC0.18□□□□□ -2.38
CSPG4Q6UVK1 RNU6-1184P-201ENST00000384588 108 ntBASIC0.18□□□□□ -2.38
CSPG4Q6UVK1 RNU6-910P-201ENST00000390844 107 ntBASIC0.18□□□□□ -2.38
CSPG4Q6UVK1 CCNG1P1-201ENST00000406783 885 ntBASIC0.18□□□□□ -2.38
CSPG4Q6UVK1 AC244023.1-201ENST00000426884 112 ntBASIC0.18□□□□□ -2.38
CSPG4Q6UVK1 FABP5P14-201ENST00000437273 393 ntBASIC0.18□□□□□ -2.38
CSPG4Q6UVK1 AC016717.1-201ENST00000448918 286 ntBASIC0.18□□□□□ -2.38
CSPG4Q6UVK1 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC0.18□□□□□ -2.38
CSPG4Q6UVK1 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC0.18□□□□□ -2.38
CSPG4Q6UVK1 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC0.18□□□□□ -2.38
CSPG4Q6UVK1 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC0.18□□□□□ -2.38
CSPG4Q6UVK1 RNU6-491P-201ENST00000516099 110 ntBASIC0.18□□□□□ -2.38
CSPG4Q6UVK1 SNORA31.17-201ENST00000516953 127 ntBASIC0.18□□□□□ -2.38
CSPG4Q6UVK1 AC124293.1-201ENST00000530034 493 ntBASIC0.18□□□□□ -2.38
CSPG4Q6UVK1 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC0.18□□□□□ -2.38
CSPG4Q6UVK1 EIF1P4-201ENST00000572664 335 ntBASIC0.18□□□□□ -2.38
CSPG4Q6UVK1 AC242498.1-201ENST00000604134 111 ntBASIC0.18□□□□□ -2.38
CSPG4Q6UVK1 AC093913.1-201ENST00000614178 329 ntBASIC0.18□□□□□ -2.38
CSPG4Q6UVK1 AC243994.1-201ENST00000618627 109 ntBASIC0.18□□□□□ -2.38
CSPG4Q6UVK1 AC079416.3-201ENST00000624479 549 ntBASIC0.18□□□□□ -2.38
CSPG4Q6UVK1 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC0.18□□□□□ -2.38
CSPG4Q6UVK1 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC0.18□□□□□ -2.38
CSPG4Q6UVK1 SNORD33-201ENST00000362761 85 ntBASIC0.18□□□□□ -2.38
CSPG4Q6UVK1 Y_RNA.559-201ENST00000384686 107 ntBASIC0.18□□□□□ -2.38
CSPG4Q6UVK1 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC0.18□□□□□ -2.38
CSPG4Q6UVK1 RNU2-47P-201ENST00000410649 186 ntBASIC0.18□□□□□ -2.38
CSPG4Q6UVK1 RNA5SP100-201ENST00000410903 110 ntBASIC0.18□□□□□ -2.38
CSPG4Q6UVK1 RNA5SP59-201ENST00000410922 110 ntBASIC0.18□□□□□ -2.38
CSPG4Q6UVK1 RNU2-64P-201ENST00000411315 191 ntBASIC0.18□□□□□ -2.38
CSPG4Q6UVK1 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC0.18□□□□□ -2.38
CSPG4Q6UVK1 AL160275.3-201ENST00000423876 471 ntBASIC0.18□□□□□ -2.38
CSPG4Q6UVK1 AL353691.1-201ENST00000451332 387 ntBASIC0.18□□□□□ -2.38
CSPG4Q6UVK1 5S_rRNA.3-201ENST00000517021 110 ntBASIC0.18□□□□□ -2.38
CSPG4Q6UVK1 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.18□□□□□ -2.38
CSPG4Q6UVK1 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC0.18□□□□□ -2.38
CSPG4Q6UVK1 ROCK1P1-201ENST00000573767 549 ntBASIC0.18□□□□□ -2.38
CSPG4Q6UVK1 Y_RNA.757-201ENST00000578934 114 ntBASIC0.18□□□□□ -2.38
CSPG4Q6UVK1 5S_rRNA.19-201ENST00000612131 110 ntBASIC0.18□□□□□ -2.38
CSPG4Q6UVK1 AP005212.4-201ENST00000614206 710 ntBASIC0.18□□□□□ -2.38
CSPG4Q6UVK1 5S_rRNA.18-201ENST00000621941 110 ntBASIC0.18□□□□□ -2.38
CSPG4Q6UVK1 AC040168.1-201ENST00000623594 991 ntBASIC0.18□□□□□ -2.38
CSPG4Q6UVK1 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC0.17□□□□□ -2.38
CSPG4Q6UVK1 RNU6-486P-201ENST00000363116 107 ntBASIC0.17□□□□□ -2.38
CSPG4Q6UVK1 MIR605-201ENST00000385078 83 ntBASIC0.17□□□□□ -2.38
CSPG4Q6UVK1 MIR1262-201ENST00000408276 93 ntBASIC0.17□□□□□ -2.38
CSPG4Q6UVK1 RNU2-48P-201ENST00000410694 191 ntBASIC0.17□□□□□ -2.38
CSPG4Q6UVK1 RNU6-233P-201ENST00000410845 141 ntBASIC0.17□□□□□ -2.38
CSPG4Q6UVK1 DDX3P2-201ENST00000446138 111 ntBASIC0.17□□□□□ -2.38
CSPG4Q6UVK1 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC0.17□□□□□ -2.38
CSPG4Q6UVK1 CENPUP1-201ENST00000526649 1202 ntBASIC0.17□□□□□ -2.38
CSPG4Q6UVK1 AL512310.8-201ENST00000550183 120 ntBASIC0.17□□□□□ -2.38
CSPG4Q6UVK1 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC0.17□□□□□ -2.38
CSPG4Q6UVK1 AL355802.4-201ENST00000607635 548 ntBASIC0.17□□□□□ -2.38
CSPG4Q6UVK1 AC004067.1-201ENST00000608733 700 ntBASIC0.17□□□□□ -2.38
CSPG4Q6UVK1 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.17□□□□□ -2.38
CSPG4Q6UVK1 LINC02555-201ENST00000563933 1951 ntBASIC0.17□□□□□ -2.38
CSPG4Q6UVK1 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.16□□□□□ -2.38
CSPG4Q6UVK1 MIR1290-201ENST00000408735 78 ntBASIC0.16□□□□□ -2.38
CSPG4Q6UVK1 RNU2-15P-201ENST00000410692 191 ntBASIC0.16□□□□□ -2.38
CSPG4Q6UVK1 RNU6-1054P-201ENST00000411293 104 ntBASIC0.16□□□□□ -2.38
CSPG4Q6UVK1 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC0.16□□□□□ -2.38
CSPG4Q6UVK1 OFD1P2Y-201ENST00000421895 1149 ntBASIC0.16□□□□□ -2.38
CSPG4Q6UVK1 MTCYBP32-201ENST00000427945 1084 ntBASIC0.16□□□□□ -2.38
CSPG4Q6UVK1 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC0.16□□□□□ -2.38
CSPG4Q6UVK1 AC132479.1-201ENST00000449160 144 ntBASIC0.16□□□□□ -2.38
CSPG4Q6UVK1 AL163195.1-201ENST00000496941 348 ntBASIC0.16□□□□□ -2.38
CSPG4Q6UVK1 AC113420.1-201ENST00000507903 571 ntBASIC0.16□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms